Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03600.t01
CDS Infomation

cds chromosome:12X:6:4511274:4517147:-1 gene:VIT_06s0004g03600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAACAAGTTGATCAGTGAGATGGGTCTCCCCACATCAATAGCCAACATCTTCGCT
GCTCGCAACATCACTACTGCCAAGGAAGCATTATCTCTAACCGAATTCGAATTGATGGAG
TTATTGGATGTGGGTATGGCGCGAGTAACATCTGCAGTGGCACACATCAGCGAAATCGTC
TCGCCACCGACGCAAACTGCCCTGTCACTGATGGAGCAGAGGGTTCAGAATGAGTATATG
GCTGGCCATCTTCCCACACGCCTCAAAGGGTTGGACGAGGCTTTAGGGGGTGGAATCCCA
TTTGGTGTTCTTACTGAGTTGGTTGGTCCTCCCGGAATTGGCAAAACCCAATTTTGCCTT
AAACTCTCATTATTGGCTTCTCTGCCTGCAAGTTATGGAGGCTTAGATGGCCGTGTAATA
TATATTGATGCCGAATCCAAGTTTAGTTCAAGAAGGATGATAGAAATTGGATCAAAGAGT
TTCCCAGAAATATTCCATGTGGAAGGAATGGCAAAGGAGGCATGCCCACTGATCCTAGTT
TTGAGGCCAACATCACTGTCTGAATTTACTGAGAGCTTACAGCACATTAAGATTTCACTT
CTCCAAAATCATGTGAAGTTGCTTGTGATTGATAGCATGGCTGCTCTTGTTACAGGGGAA
TATGACCAGGGGCCTACCAGACAACATTCATTGGGTTGGCATATTTCTTTTGTTAAGTCA
GTTGCAGAATTTTCACGAATTCCTATTGTAGTGACAAACCAGGTGAGGTCTCAAAGCCAT
GACGGAACCTCGCAATATTCCTTCCAAGTGGAGAGCAGGGGTGAAACTGTAGATGACCAC
ACGAGATTTGATTCTCATCTTGTTGCTGCTTTGGGGATTCATTGGGCTCATGCTGTAACC
ATTCGTCTTGTGCTTGAGGCTAAAGCAGGTCAGAGGTTTCTGAAAGTGGCAAAATCTCCA
ATATCTCCACCTCTGGCATTCCCTTTCAACATAACTCCATCAGGGATCTCCTTGCTAAAT
GATGAGGGAATAGAAATGAAAGGACCACAGATAAGCACAATTCACTATCAAGGCCACGAG
GACATCATCAACTTTGACAGTGAAAGGTTGCAGTGA

Peptide Sequence

PEP ID

VIT_06s0004g03600.t01
PEP Infomation

pep chromosome:12X:6:4511274:4517147:-1 gene:VIT_06s0004g03600 transcript:VIT_06s0004g03600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MANKLISEMGLPTSIANIFAARNITTAKEALSLTEFELMELLDVGMARVTSAVAHISEIV
SPPTQTALSLMEQRVQNEYMAGHLPTRLKGLDEALGGGIPFGVLTELVGPPGIGKTQFCL
KLSLLASLPASYGGLDGRVIYIDAESKFSSRRMIEIGSKSFPEIFHVEGMAKEACPLILV
LRPTSLSEFTESLQHIKISLLQNHVKLLVIDSMAALVTGEYDQGPTRQHSLGWHISFVKS
VAEFSRIPIVVTNQVRSQSHDGTSQYSFQVESRGETVDDHTRFDSHLVAALGIHWAHAVT
IRLVLEAKAGQRFLKVAKSPISPPLAFPFNITPSGISLLNDEGIEMKGPQISTIHYQGHE
DIINFDSERLQ

Transcript Sequence

Transcript ID

VIT_06s0004g03600.t01
Transcript Infomation

cdna chromosome:12X:6:4511274:4517147:-1 gene:VIT_06s0004g03600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAACGATGGCGAACAAGTTGATCAGTGAGATGGGTCTCCCCACATCAATAGCCAACATCT
TCGCTGCTCGCAACATCACTACTGCCAAGGAAGCATTATCTCTAACCGAATTCGAATTGA
TGGAGTTATTGGATGTGGGTATGGCGCGAGTAACATCTGCAGTGGCACACATCAGCGAAA
TCGTCTCGCCACCGACGCAAACTGCCCTGTCACTGATGGAGCAGAGGGTTCAGAATGAGT
ATATGGCTGGCCATCTTCCCACACGCCTCAAAGGGTTGGACGAGGCTTTAGGGGGTGGAA
TCCCATTTGGTGTTCTTACTGAGTTGGTTGGTCCTCCCGGAATTGGCAAAACCCAATTTT
GCCTTAAACTCTCATTATTGGCTTCTCTGCCTGCAAGTTATGGAGGCTTAGATGGCCGTG
TAATATATATTGATGCCGAATCCAAGTTTAGTTCAAGAAGGATGATAGAAATTGGATCAA
AGAGTTTCCCAGAAATATTCCATGTGGAAGGAATGGCAAAGGAGGCATGCCCACTGATCC
TAGTTTTGAGGCCAACATCACTGTCTGAATTTACTGAGAGCTTACAGCACATTAAGATTT
CACTTCTCCAAAATCATGTGAAGTTGCTTGTGATTGATAGCATGGCTGCTCTTGTTACAG
GGGAATATGACCAGGGGCCTACCAGACAACATTCATTGGGTTGGCATATTTCTTTTGTTA
AGTCAGTTGCAGAATTTTCACGAATTCCTATTGTAGTGACAAACCAGGTGAGGTCTCAAA
GCCATGACGGAACCTCGCAATATTCCTTCCAAGTGGAGAGCAGGGGTGAAACTGTAGATG
ACCACACGAGATTTGATTCTCATCTTGTTGCTGCTTTGGGGATTCATTGGGCTCATGCTG
TAACCATTCGTCTTGTGCTTGAGGCTAAAGCAGGTCAGAGGTTTCTGAAAGTGGCAAAAT
CTCCAATATCTCCACCTCTGGCATTCCCTTTCAACATAACTCCATCAGGGATCTCCTTGC
TAAATGATGAGGGAATAGAAATGAAAGGACCACAGATAAGCACAATTCACTATCAAGGCC
ACGAGGACATCATCAACTTTGACAGTGAAAGGTTGCAGTGA