Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03590.t01
CDS Infomation

cds chromosome:12X:6:4494335:4498190:-1 gene:VIT_06s0004g03590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGGATCTCAATCTCAATGTTGGCTCGAGCGATTCGACTCAGCACGGAGACTCGGTG
GTAGGGTCGGAGAAGTTTCCGGAAGGTTCTGGAACTCAAATGGACGAGTCGGGGACCTCC
AACTCGTCAATCGTGAATGCAGAAGCGTCGAGCAATGGCGGCGGCGACGATGACTCTTGC
TCCACACGCGCCGGCGATGCCTTCTCGTTGAATTTCGATATCTTGAAGGTCGGTGATTGC
GGTAGTCCGAACGATGTCGTTACGAGGCAGCTGTTCCCGATGAGTGCCGGTGGAGGAGTT
GGTGGAGATTCTGTGTTTTTTCAGGGGCAGTCGTCAAGCAATTGGATCGACCTGTCATTC
AATCAGAGTGGTACTGTTGGTGGGCAAGAGGTGAGAGTGGCTCAACAGCATCCACAGCCA
CAGCAACAGCAACAGCCGGTGAAGAAGAGCAGGAGGGGACCCAGGTCCCGAAGCTCTCAG
TACAGAGGAGTTACGTTCTACAGGAGGACTGGAAGATGGGAATCGCATATCTGGGATTGT
GGGAAACAAGTGTATTTGGGTGGATTTGACACTGCTCATGCTGCAGCTAGAGCCTATGAT
CGAGCGGCTATTAAGTTTCGGGGAGTTGATGCTGACATTAATTTTAATCTTAGTGATTAT
GATGAGGATCTGAAACAGATGAAGAATCTGACAAAGGAAGAATTTGTGCACATACTCCGT
CGCCAGAGTACTGGTTTCTCCAGGGGGAGCTCAAAATACCGAGGGGTGACACTGCACAAA
TGTGGCCGGTGGGAAGCTCGAATGGGTCAATTTCTTGGAAAAAAGTATATATATCTTGGG
CTCTTCGACAGTGAAGTAGAAGCTGCAAGGGCTTATGATAAGGCGGCTATCAAATGTAAT
GGAAGAGAGGCAGTCACCAACTTTGAGCCTAGTACTTATGAAGGGGAGATGATCCCTGAG
GCCAGCAATGAAGGTAGTGATCACAATCTTGATCTGAACTTGGGGATTTCTCCTCCTTTA
AGCAATGGCCCAAAGGAAATTGACGGCTTGGGGCATCTCCAATTTCACTCTGGCTCTCAT
GATGCTCACAATGGAAGGAGATCAATGATGGAGAACCCTAATATAGAAACAGCGGGTGAC
CCGTCTTTCAAAGGGCTAGCAATGACATCGGAGCACCCTCCTCTGTGGACTGGTGTATAT
CCCAGCTTCTTTCCTGGCTATGAGGAAAGGGCAACAGAGAGAAGAATTGAAGCAAGTTCT
TCACAAGGACTCCCAAACTGGGGGTGGCAAATGCATGGTCAGGTCACTGCTACTCCAATG
CCATTGTTCTCTACTGCAGCATCATCAGGATTCTCATCTTCGGCTACCACTGCTCCCTCC
GCTGCCATTCTTTCATCTAAACCGCCCAACACAACATCCCACTCTATCTGTTTTGCTTCA
TCCGCCTCAGCCGTCACCCACCCCTCTCAATACTATTTCCAGATGAAGCCCCCACCACCT
TAA

Peptide Sequence

PEP ID

VIT_06s0004g03590.t01
PEP Infomation

pep chromosome:12X:6:4494335:4498190:-1 gene:VIT_06s0004g03590 transcript:VIT_06s0004g03590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLDLNLNVGSSDSTQHGDSVVGSEKFPEGSGTQMDESGTSNSSIVNAEASSNGGGDDDSC
STRAGDAFSLNFDILKVGDCGSPNDVVTRQLFPMSAGGGVGGDSVFFQGQSSSNWIDLSF
NQSGTVGGQEVRVAQQHPQPQQQQQPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDC
GKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYDEDLKQMKNLTKEEFVHILR
RQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCN
GREAVTNFEPSTYEGEMIPEASNEGSDHNLDLNLGISPPLSNGPKEIDGLGHLQFHSGSH
DAHNGRRSMMENPNIETAGDPSFKGLAMTSEHPPLWTGVYPSFFPGYEERATERRIEASS
SQGLPNWGWQMHGQVTATPMPLFSTAASSGFSSSATTAPSAAILSSKPPNTTSHSICFAS
SASAVTHPSQYYFQMKPPPP

Transcript Sequence

Transcript ID

VIT_06s0004g03590.t01
Transcript Infomation

cdna chromosome:12X:6:4494335:4498190:-1 gene:VIT_06s0004g03590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTCTCAGCCGTTGGTTGGAGCTCAAATGGTTGGTGGAGGTGATTCTGTGAAGCTGAGCC
TGTGAGAGAGGGAGGCGAATCGGAGTTGAAGAGGAGGGAGTCATGTTGGATCTCAATCTC
AATGTTGGCTCGAGCGATTCGACTCAGCACGGAGACTCGGTGGTAGGGTCGGAGAAGTTT
CCGGAAGGTTCTGGAACTCAAATGGACGAGTCGGGGACCTCCAACTCGTCAATCGTGAAT
GCAGAAGCGTCGAGCAATGGCGGCGGCGACGATGACTCTTGCTCCACACGCGCCGGCGAT
GCCTTCTCGTTGAATTTCGATATCTTGAAGGTCGGTGATTGCGGTAGTCCGAACGATGTC
GTTACGAGGCAGCTGTTCCCGATGAGTGCCGGTGGAGGAGTTGGTGGAGATTCTGTGTTT
TTTCAGGGGCAGTCGTCAAGCAATTGGATCGACCTGTCATTCAATCAGAGTGGTACTGTT
GGTGGGCAAGAGGTGAGAGTGGCTCAACAGCATCCACAGCCACAGCAACAGCAACAGCCG
GTGAAGAAGAGCAGGAGGGGACCCAGGTCCCGAAGCTCTCAGTACAGAGGAGTTACGTTC
TACAGGAGGACTGGAAGATGGGAATCGCATATCTGGGATTGTGGGAAACAAGTGTATTTG
GGTGGATTTGACACTGCTCATGCTGCAGCTAGAGCCTATGATCGAGCGGCTATTAAGTTT
CGGGGAGTTGATGCTGACATTAATTTTAATCTTAGTGATTATGATGAGGATCTGAAACAG
ATGAAGAATCTGACAAAGGAAGAATTTGTGCACATACTCCGTCGCCAGAGTACTGGTTTC
TCCAGGGGGAGCTCAAAATACCGAGGGGTGACACTGCACAAATGTGGCCGGTGGGAAGCT
CGAATGGGTCAATTTCTTGGAAAAAAGTATATATATCTTGGGCTCTTCGACAGTGAAGTA
GAAGCTGCAAGGGCTTATGATAAGGCGGCTATCAAATGTAATGGAAGAGAGGCAGTCACC
AACTTTGAGCCTAGTACTTATGAAGGGGAGATGATCCCTGAGGCCAGCAATGAAGGTAGT
GATCACAATCTTGATCTGAACTTGGGGATTTCTCCTCCTTTAAGCAATGGCCCAAAGGAA
ATTGACGGCTTGGGGCATCTCCAATTTCACTCTGGCTCTCATGATGCTCACAATGGAAGG
AGATCAATGATGGAGAACCCTAATATAGAAACAGCGGGTGACCCGTCTTTCAAAGGGCTA
GCAATGACATCGGAGCACCCTCCTCTGTGGACTGGTGTATATCCCAGCTTCTTTCCTGGC
TATGAGGAAAGGGCAACAGAGAGAAGAATTGAAGCAAGTTCTTCACAAGGACTCCCAAAC
TGGGGGTGGCAAATGCATGGTCAGGTCACTGCTACTCCAATGCCATTGTTCTCTACTGCA
GCATCATCAGGATTCTCATCTTCGGCTACCACTGCTCCCTCCGCTGCCATTCTTTCATCT
AAACCGCCCAACACAACATCCCACTCTATCTGTTTTGCTTCATCCGCCTCAGCCGTCACC
CACCCCTCTCAATACTATTTCCAGATGAAGCCCCCACCACCTTAATCCACCCATCACACC
TCCACCTCCCCCTTTATCAAAGGCGGATAGGCAACCACAACAAAAACAGAGTGGTCTTCA
AATTCATTTGTATGTTTCAAATAGTCGATTGATATGCGCCATGTCTAGGCGCCCAACTAG
TTTGGTAAACCATTACTCTACAGGATTTATTAGTATCAAGAAAATGCTAATCCCTTTTGC
CTTTGTTATGTAGCACTGGGTTGTTGAAATTCTATTAAACTTCCTTATTAGTTGTTGTGT
CTGATGG