Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03530.t01
CDS Infomation

cds chromosome:12X:6:4420280:4422979:-1 gene:VIT_06s0004g03530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGCCGCAGACCTGCAAAATCCCGATTGCACCGCCCAACCTTCATTCTCCGGCGAC
CGTGAGTCTCAAATTTCAGATTCCGGCAGCACAAAAGGCGGCTGGATCACCTTCCTCTTC
ATCGCAGGTGCCTTGACGGGCTTGACACTGGCGGCCGGCGGATGGGGGGCGAACCTGATC
GTGTATCTGATAGAAGAGTTCAGCGTTAAGAGAATCGACGCCGCTCAGATTTCCAACGTG
GTTAGCGGTTCCACCAGCCTGTTTCCGATCGTCGGAGCTATCGCTGCTGACTGTTTCTTT
GGAAGCTTCTCCATCATTGCTCTCTGTTCGTGTATCTCTTTGCTGGGGGTGGTATTTTTA
GCCCTAACCACACTAGATTTCTTGAGGCCTCAACAGTGTGAACATGGATCTACCCTCTGC
AAAAACCCATCAAAAATCCAATTCGCAGTCCTATACTCGGGTATAACACTGGCCGTAATA
GGTCTGGGGGGTACCCGATTCACTCTAGCGACCATGGGAGCAGATCAATTCGATAAACCC
AAACATCAAGCCACTTTCTTCAACTGGTACTTCTTCGTTTTCTACGTTTCTTCTGTAATA
AGTAACACAGCCATTGTGTATGTTGAAGATAACGTGAGTTGGACATGGGGTTTTGGCCTA
ACCGTTGTGTGTAACCTCATTGGCTTAGTCATTTTCTTATTGGGAAGTCGATTCTACCGC
CATGTTAAGCCTCAAGGGAGCCCGTTTGTGGATTTGGCTCGGGTTTTTGTGGCCGCCTTG
CGGAAAAGGAAGGTTCTGATCTCTTTGAATAGCGATGATTATTATTATTGCCATAAGCAT
CAAGGATATGTGAAAATGGTGACTGCCACTACACCTACAAAGAGTTTTAGGTTCCTGAAT
CGAGCAGCACTGAAAACTGAAGGAGACATTAGAGCAGATGGCTTAATCGCAAAACCATGG
AGGTTATGTACAGTCCAACAAGTAGAAGACCTCAAAACCCTAATCAGAATCTTTCCACTT
TGGTGCACTAGTATATTCTTATCCACCCCAATAGGAATCCAAAGCAGCCTAACAGTCCTC
CAAGCCCTAACCATGGACCGTCACCTTGGCCCTCATTTCAAAATCCCAGCAGGCTCCATC
CTTGTCATCGCATTCATCTCTGCTGCCATCTCTCTCACCCTCATCGATCGCATCCTATGT
CCATTATGGAAGAAACTCACCAATCATTCTCCAACGCCCCTCCAAAGGATCGGCCTCGGC
CACATTCTCAATGCCCTTAGCATGGCGGTCTCCGCCCTGGTCGAGTCGAGGAGGCTTCGA
ATAGCTCACGCCCACCACCTCCAGAACCAGCCTGCAGGCCCCATAACACCCATGCTTTCT
CTATGGTTGTTTCCACAGCTTGCTTTAGTGGGCATTGGCGAAGCCTTTCATTTTCCGGGA
CAAGTTTCGCTCTACTACCAGGAGTTTCCCACTTCCTTGCGAAGCACTTCCACTGCAATG
ATTTCACTGCTTATTGCCATAGCATTCTATCTGAGCACTGCGGTGATCGATCTTATTCGA
AGAACCACCAAGTGGTTGCCAGACGATTTAAATAATGGGAGGCTCGATAATGTGTATTGG
TTGCTGACAGTGGTCGGAATGCTCAACTTTTTTGGCTACTTAGTGTGCGCTACAATGTAC
AAGTATAAGAATACTGATGAGGGTCATGGAACAAGTAATGGGTCCGATCAGTGA

Peptide Sequence

PEP ID

VIT_06s0004g03530.t01
PEP Infomation

pep chromosome:12X:6:4420280:4422979:-1 gene:VIT_06s0004g03530 transcript:VIT_06s0004g03530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAADLQNPDCTAQPSFSGDRESQISDSGSTKGGWITFLFIAGALTGLTLAAGGWGANLI
VYLIEEFSVKRIDAAQISNVVSGSTSLFPIVGAIAADCFFGSFSIIALCSCISLLGVVFL
ALTTLDFLRPQQCEHGSTLCKNPSKIQFAVLYSGITLAVIGLGGTRFTLATMGADQFDKP
KHQATFFNWYFFVFYVSSVISNTAIVYVEDNVSWTWGFGLTVVCNLIGLVIFLLGSRFYR
HVKPQGSPFVDLARVFVAALRKRKVLISLNSDDYYYCHKHQGYVKMVTATTPTKSFRFLN
RAALKTEGDIRADGLIAKPWRLCTVQQVEDLKTLIRIFPLWCTSIFLSTPIGIQSSLTVL
QALTMDRHLGPHFKIPAGSILVIAFISAAISLTLIDRILCPLWKKLTNHSPTPLQRIGLG
HILNALSMAVSALVESRRLRIAHAHHLQNQPAGPITPMLSLWLFPQLALVGIGEAFHFPG
QVSLYYQEFPTSLRSTSTAMISLLIAIAFYLSTAVIDLIRRTTKWLPDDLNNGRLDNVYW
LLTVVGMLNFFGYLVCATMYKYKNTDEGHGTSNGSDQ

Transcript Sequence

Transcript ID

VIT_06s0004g03530.t01
Transcript Infomation

cdna chromosome:12X:6:4420280:4422979:-1 gene:VIT_06s0004g03530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGCCGCAGACCTGCAAAATCCCGATTGCACCGCCCAACCTTCATTCTCCGGCGAC
CGTGAGTCTCAAATTTCAGATTCCGGCAGCACAAAAGGCGGCTGGATCACCTTCCTCTTC
ATCGCAGGTGCCTTGACGGGCTTGACACTGGCGGCCGGCGGATGGGGGGCGAACCTGATC
GTGTATCTGATAGAAGAGTTCAGCGTTAAGAGAATCGACGCCGCTCAGATTTCCAACGTG
GTTAGCGGTTCCACCAGCCTGTTTCCGATCGTCGGAGCTATCGCTGCTGACTGTTTCTTT
GGAAGCTTCTCCATCATTGCTCTCTGTTCGTGTATCTCTTTGCTGGGGGTGGTATTTTTA
GCCCTAACCACACTAGATTTCTTGAGGCCTCAACAGTGTGAACATGGATCTACCCTCTGC
AAAAACCCATCAAAAATCCAATTCGCAGTCCTATACTCGGGTATAACACTGGCCGTAATA
GGTCTGGGGGGTACCCGATTCACTCTAGCGACCATGGGAGCAGATCAATTCGATAAACCC
AAACATCAAGCCACTTTCTTCAACTGGTACTTCTTCGTTTTCTACGTTTCTTCTGTAATA
AGTAACACAGCCATTGTGTATGTTGAAGATAACGTGAGTTGGACATGGGGTTTTGGCCTA
ACCGTTGTGTGTAACCTCATTGGCTTAGTCATTTTCTTATTGGGAAGTCGATTCTACCGC
CATGTTAAGCCTCAAGGGAGCCCGTTTGTGGATTTGGCTCGGGTTTTTGTGGCCGCCTTG
CGGAAAAGGAAGGTTCTGATCTCTTTGAATAGCGATGATTATTATTATTGCCATAAGCAT
CAAGGATATGTGAAAATGGTGACTGCCACTACACCTACAAAGAGTTTTAGGTTCCTGAAT
CGAGCAGCACTGAAAACTGAAGGAGACATTAGAGCAGATGGCTTAATCGCAAAACCATGG
AGGTTATGTACAGTCCAACAAGTAGAAGACCTCAAAACCCTAATCAGAATCTTTCCACTT
TGGTGCACTAGTATATTCTTATCCACCCCAATAGGAATCCAAAGCAGCCTAACAGTCCTC
CAAGCCCTAACCATGGACCGTCACCTTGGCCCTCATTTCAAAATCCCAGCAGGCTCCATC
CTTGTCATCGCATTCATCTCTGCTGCCATCTCTCTCACCCTCATCGATCGCATCCTATGT
CCATTATGGAAGAAACTCACCAATCATTCTCCAACGCCCCTCCAAAGGATCGGCCTCGGC
CACATTCTCAATGCCCTTAGCATGGCGGTCTCCGCCCTGGTCGAGTCGAGGAGGCTTCGA
ATAGCTCACGCCCACCACCTCCAGAACCAGCCTGCAGGCCCCATAACACCCATGCTTTCT
CTATGGTTGTTTCCACAGCTTGCTTTAGTGGGCATTGGCGAAGCCTTTCATTTTCCGGGA
CAAGTTTCGCTCTACTACCAGGAGTTTCCCACTTCCTTGCGAAGCACTTCCACTGCAATG
ATTTCACTGCTTATTGCCATAGCATTCTATCTGAGCACTGCGGTGATCGATCTTATTCGA
AGAACCACCAAGTGGTTGCCAGACGATTTAAATAATGGGAGGCTCGATAATGTGTATTGG
TTGCTGACAGTGGTCGGAATGCTCAACTTTTTTGGCTACTTAGTGTGCGCTACAATGTAC
AAGTATAAGAATACTGATGAGGGTCATGGAACAAGTAATGGGTCCGATCAGTGAGCTAGG
CTTCATGATGAGTAGTTGAACTAATATCCTGTTTATCCTCTTTATATATCTTTTATGAAC
ATATATAAAGACTGGTATTAAAACGGGCTTGGAAATTAATACTGTTGTCTTGTGTCAAGT
GTTTTACTTGATTATTGATTCAAAACAA