Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03520.t01
CDS Infomation

cds chromosome:12X:6:4386061:4389065:-1 gene:VIT_06s0004g03520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGCCGCAGACCTGCAAAATCCCGATTGCACCGCCCAACCCTCACTCTCCGGCGAC
CGTGAGTCTCAAATTTCAGATTCCGGCAGCACAAAAGGCGGCTGGATCACCTTCCTCTTC
ATCGCAGGTGCCTTGACGGGCTTGACACTGGCGGCCGGCGGATGGGGGGCGAACCTGATC
GTGTATCTGATAGAAGAGTTCAACGTTAAGAGAATCGACGCCGCTCAGATTTCCAACGTG
GTTAGCGGTTCCACCAGCCTGTTTCCGATCGTCGGAGCTATCGCTGCTGACTGTTTCTTT
GGAAGCTTCTCCATCATTGCTCTCTGTTCGTGTATCTCTTTGCTGGGGGTGGTACTTTTA
GCCCTAACCACGCTAGATTTCTTGAGGCCTCAACAGTGTGAACATGGATCTACCCTCTGC
AAAAACCCATCAAAAATCCAATTCGCAGTCCTATACTCCGGTATAGCACTGGCCGTAATA
GGTCTGGGGGGAACCCGATTCACTCTAGCGACCATGGGAGCAGATCAATTCGATAAACCC
AAACATCAAGGCACTTTCTTCAACTGGTACTTCTTCGTTTTCTACGTTTCTGCTGTAATA
AGTAACACAGCCATTGTGTATGTTGAAGATAACGTGAGTTGGACATGGGGTTTTGGCCTA
ACCGTTGTGTGTAACCTCATTGGCTTAGTCATTTTCTTATTGGGAAGTCGATTCTACCGC
CATGTTAAGCCTCAAGGGAGCCCGTTTGTGGATTTGGCTCGGGTTTTTGTGGCCGCCTTG
CGGAAAAGGAAGGTTCTGCTCTCTTTGAATAGCGATGATTATTATTATTGCCATAAGCAT
CAAGGATCTGTGAAGATGGTGACTGGCACTACACCTACAAAGAGTTTTAGGTTCCTGAAT
CGAGCAGCACTGAAAACTGAAGGAGACAATAGAGCAGATGGCTTAATCGCAAAACCATGG
AGGTTATGTACAGTCCAACAAGTAGTAGACCTCAAAACCCTAATCAGAATCTTTCCACTT
TGGTGCACTAGTATATTCTTAGCCACCCCAATAGGAATCCAAAGCAGCCTAACAGTCCTC
CAAGCCCTAACCATGGACCGTCACCTTGGCCCTCATTTCAAAATCCCAGCAGGCTCCATC
TTTGTCATCGCATTCATCTCTACTGCCATCTCTCTCACCCTCATCGATCGAATCTTATGT
CCATTATGGAAGAAACTCACCAATCATTCTCCAACGCCCCTCCAAAGGATCGGCCTCGGC
CAAATTCTCAATGCCCTTAGCATGGCGGTCTCCGCCCTGGTCGAGTCGAGGAGGCTTCGA
ATAGCTCACGCCCACCACCTCCAGAACCAGCCTGCAGGCCCCATAACACCCATGCTTGCT
CTATGGTTGTTTCCACAGCTTGCTTTAGTGGGCATTGGCGAAGCCTTTCATTTTCCGGGA
CAAGTTTCGCTCTACTACCAGGAGTTTCCCACTTCCTTGCGAAGCACTTCCACTGCAATG
ATTTCACTGCTTATTGCCATAGCATTCTATCTGAGCACTGCGGTGATCGATCTTATTCGA
AGAACCACCAAGTGGTTGCCAGACGATTTAAATAATGGGAGGCTCGATAATGTGTATTGG
TTGCTGACAGTGCTCGGAATGCTCAACTTTTTTGGCTACTTAGTGTGCGCTAGAATGTAC
AAGTATAAGTATACTGATGAGGGTCATGGAACAAGTAATGGGTCCGATCAGTGA

Peptide Sequence

PEP ID

VIT_06s0004g03520.t01
PEP Infomation

pep chromosome:12X:6:4386061:4389065:-1 gene:VIT_06s0004g03520 transcript:VIT_06s0004g03520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAADLQNPDCTAQPSLSGDRESQISDSGSTKGGWITFLFIAGALTGLTLAAGGWGANLI
VYLIEEFNVKRIDAAQISNVVSGSTSLFPIVGAIAADCFFGSFSIIALCSCISLLGVVLL
ALTTLDFLRPQQCEHGSTLCKNPSKIQFAVLYSGIALAVIGLGGTRFTLATMGADQFDKP
KHQGTFFNWYFFVFYVSAVISNTAIVYVEDNVSWTWGFGLTVVCNLIGLVIFLLGSRFYR
HVKPQGSPFVDLARVFVAALRKRKVLLSLNSDDYYYCHKHQGSVKMVTGTTPTKSFRFLN
RAALKTEGDNRADGLIAKPWRLCTVQQVVDLKTLIRIFPLWCTSIFLATPIGIQSSLTVL
QALTMDRHLGPHFKIPAGSIFVIAFISTAISLTLIDRILCPLWKKLTNHSPTPLQRIGLG
QILNALSMAVSALVESRRLRIAHAHHLQNQPAGPITPMLALWLFPQLALVGIGEAFHFPG
QVSLYYQEFPTSLRSTSTAMISLLIAIAFYLSTAVIDLIRRTTKWLPDDLNNGRLDNVYW
LLTVLGMLNFFGYLVCARMYKYKYTDEGHGTSNGSDQ

Transcript Sequence

Transcript ID

VIT_06s0004g03520.t01
Transcript Infomation

cdna chromosome:12X:6:4386061:4389065:-1 gene:VIT_06s0004g03520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGCCGCAGACCTGCAAAATCCCGATTGCACCGCCCAACCCTCACTCTCCGGCGAC
CGTGAGTCTCAAATTTCAGATTCCGGCAGCACAAAAGGCGGCTGGATCACCTTCCTCTTC
ATCGCAGGTGCCTTGACGGGCTTGACACTGGCGGCCGGCGGATGGGGGGCGAACCTGATC
GTGTATCTGATAGAAGAGTTCAACGTTAAGAGAATCGACGCCGCTCAGATTTCCAACGTG
GTTAGCGGTTCCACCAGCCTGTTTCCGATCGTCGGAGCTATCGCTGCTGACTGTTTCTTT
GGAAGCTTCTCCATCATTGCTCTCTGTTCGTGTATCTCTTTGCTGGGGGTGGTACTTTTA
GCCCTAACCACGCTAGATTTCTTGAGGCCTCAACAGTGTGAACATGGATCTACCCTCTGC
AAAAACCCATCAAAAATCCAATTCGCAGTCCTATACTCCGGTATAGCACTGGCCGTAATA
GGTCTGGGGGGAACCCGATTCACTCTAGCGACCATGGGAGCAGATCAATTCGATAAACCC
AAACATCAAGGCACTTTCTTCAACTGGTACTTCTTCGTTTTCTACGTTTCTGCTGTAATA
AGTAACACAGCCATTGTGTATGTTGAAGATAACGTGAGTTGGACATGGGGTTTTGGCCTA
ACCGTTGTGTGTAACCTCATTGGCTTAGTCATTTTCTTATTGGGAAGTCGATTCTACCGC
CATGTTAAGCCTCAAGGGAGCCCGTTTGTGGATTTGGCTCGGGTTTTTGTGGCCGCCTTG
CGGAAAAGGAAGGTTCTGCTCTCTTTGAATAGCGATGATTATTATTATTGCCATAAGCAT
CAAGGATCTGTGAAGATGGTGACTGGCACTACACCTACAAAGAGTTTTAGGTTCCTGAAT
CGAGCAGCACTGAAAACTGAAGGAGACAATAGAGCAGATGGCTTAATCGCAAAACCATGG
AGGTTATGTACAGTCCAACAAGTAGTAGACCTCAAAACCCTAATCAGAATCTTTCCACTT
TGGTGCACTAGTATATTCTTAGCCACCCCAATAGGAATCCAAAGCAGCCTAACAGTCCTC
CAAGCCCTAACCATGGACCGTCACCTTGGCCCTCATTTCAAAATCCCAGCAGGCTCCATC
TTTGTCATCGCATTCATCTCTACTGCCATCTCTCTCACCCTCATCGATCGAATCTTATGT
CCATTATGGAAGAAACTCACCAATCATTCTCCAACGCCCCTCCAAAGGATCGGCCTCGGC
CAAATTCTCAATGCCCTTAGCATGGCGGTCTCCGCCCTGGTCGAGTCGAGGAGGCTTCGA
ATAGCTCACGCCCACCACCTCCAGAACCAGCCTGCAGGCCCCATAACACCCATGCTTGCT
CTATGGTTGTTTCCACAGCTTGCTTTAGTGGGCATTGGCGAAGCCTTTCATTTTCCGGGA
CAAGTTTCGCTCTACTACCAGGAGTTTCCCACTTCCTTGCGAAGCACTTCCACTGCAATG
ATTTCACTGCTTATTGCCATAGCATTCTATCTGAGCACTGCGGTGATCGATCTTATTCGA
AGAACCACCAAGTGGTTGCCAGACGATTTAAATAATGGGAGGCTCGATAATGTGTATTGG
TTGCTGACAGTGCTCGGAATGCTCAACTTTTTTGGCTACTTAGTGTGCGCTAGAATGTAC
AAGTATAAGTATACTGATGAGGGTCATGGAACAAGTAATGGGTCCGATCAGTGAGCTAGG
CTTCATGATGAGTAGTTGAACTAATATCCTGTTTATCCTCTTTATATATCTTTATGAACA
TATATAAAGACTGGTATTAAAATGGACTTGGAAATTAATACTGTTGTCTTGTGTCAAGTG
TTATACTTGATTATTGATTCATAACAA