Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03340.t01
CDS Infomation

cds chromosome:12X:6:4195480:4196807:-1 gene:VIT_06s0004g03340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTATTGCTTATCCTCATTTTATTGGGTCTCAGAAATCTGCAATGGAGACGGGGATG
ATATCATCTCCGTCTTCGTCTTCTCCATCTCGGCCTCCTGTGATCCTTACCCAAGATGAG
TTGAAGAAAATCGCGGCGTACAAAGCTGTGGAATACGTTGAGTCCGGTATGGTTCTCGGG
CTCGGAACCGGGTCAACGGCGAAGCACGCCGTGGACCGCATAGGCGAGCTTTTGCGGCAA
GGGAAGTTGAAGAACATTGTGGGAATACCCACATCGAAGATGACCCACGAACAAGCGGTT
TCGTTGGGGATTCCATTGTCGGATCTGGATTCTTATCCGATTTTGGATCTTGCTATTGAT
GGTGCGGATGAAGTCGACCCGTATTTGAATTTGGTGAAGGGTCGGGGCGGGTCACTGCTG
AGGGAGAAGATGGTGGAGGGTGCTTGTAAGAAATTCGTTGTGATTGTTGATGAGTCCAAA
TTAGTTAACTATTTGGGAGGCAGTGGTCTCGCTATGCCGGTTGAGATTGTGCCGTTTTGT
TGGAAATTTACTGCCCAAAGGTTGCAAATGTTGTTTGAGGAATCTGGTTGTGTCGCAAAG
CTTAGGACTTACCAGAATGGAGAACCTTTTGTTACAGATAATATGAATTACATTGTGGAC
TTGTATTTCAAAAGGGAAATTGGGGATTTGAAGGTTGCGAGTGATGCAATTCTGAGACTT
GCTGGTGTCGTTGAGCATGGAATGTTTATTGATATGGCAACCACTCTTATTGTTGCAGGG
GAGTGTGGTGTCATTGTGAAGGATAAGTGGGACTCTGCAAGCCATCGGAGTATTTTGGCC
TCCTGGCAATCAATTGATACACCTGTTGGGGAGTTTGAAGTTTCCCCTAGAATTTTTTGT
CAAGCTCACATTTAG

Peptide Sequence

PEP ID

VIT_06s0004g03340.t01
PEP Infomation

pep chromosome:12X:6:4195480:4196807:-1 gene:VIT_06s0004g03340 transcript:VIT_06s0004g03340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAIAYPHFIGSQKSAMETGMISSPSSSSPSRPPVILTQDELKKIAAYKAVEYVESGMVLG
LGTGSTAKHAVDRIGELLRQGKLKNIVGIPTSKMTHEQAVSLGIPLSDLDSYPILDLAID
GADEVDPYLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVNYLGGSGLAMPVEIVPFC
WKFTAQRLQMLFEESGCVAKLRTYQNGEPFVTDNMNYIVDLYFKREIGDLKVASDAILRL
AGVVEHGMFIDMATTLIVAGECGVIVKDKWDSASHRSILASWQSIDTPVGEFEVSPRIFC
QAHI

Transcript Sequence

Transcript ID

VIT_06s0004g03340.t01
Transcript Infomation

cdna chromosome:12X:6:4195480:4196807:-1 gene:VIT_06s0004g03340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTCGTGGGTCTATTTTCTTCCTATCTCAAAACCCTAACTAACCCTAACTCTAACCCAT
TCACAATTTTGAATTTTCTTATCCATTCACAATTTTGAATTTTCTTATCCAAACGCAAGA
CAGATTTTTTTGTTCTGGGCATATATATGGCTATTGCTTATCCTCATTTTATTGGGTCTC
AGAAATCTGCAATGGAGACGGGGATGATATCATCTCCGTCTTCGTCTTCTCCATCTCGGC
CTCCTGTGATCCTTACCCAAGATGAGTTGAAGAAAATCGCGGCGTACAAAGCTGTGGAAT
ACGTTGAGTCCGGTATGGTTCTCGGGCTCGGAACCGGGTCAACGGCGAAGCACGCCGTGG
ACCGCATAGGCGAGCTTTTGCGGCAAGGGAAGTTGAAGAACATTGTGGGAATACCCACAT
CGAAGATGACCCACGAACAAGCGGTTTCGTTGGGGATTCCATTGTCGGATCTGGATTCTT
ATCCGATTTTGGATCTTGCTATTGATGGTGCGGATGAAGTCGACCCGTATTTGAATTTGG
TGAAGGGTCGGGGCGGGTCACTGCTGAGGGAGAAGATGGTGGAGGGTGCTTGTAAGAAAT
TCGTTGTGATTGTTGATGAGTCCAAATTAGTTAACTATTTGGGAGGCAGTGGTCTCGCTA
TGCCGGTTGAGATTGTGCCGTTTTGTTGGAAATTTACTGCCCAAAGGTTGCAAATGTTGT
TTGAGGAATCTGGTTGTGTCGCAAAGCTTAGGACTTACCAGAATGGAGAACCTTTTGTTA
CAGATAATATGAATTACATTGTGGACTTGTATTTCAAAAGGGAAATTGGGGATTTGAAGG
TTGCGAGTGATGCAATTCTGAGACTTGCTGGTGTCGTTGAGCATGGAATGTTTATTGATA
TGGCAACCACTCTTATTGTTGCAGGGGAGTGTGGTGTCATTGTGAAGGATAAGTGGGACT
CTGCAAGCCATCGGAGTATTTTGGCCTCCTGGCAATCAATTGATACACCTGTTGGGGAGT
TTGAAGTTTCCCCTAGAATTTTTTGTCAAGCTCACATTTAGTGAATGATGATGAACTTTT
TGTATTAGCAACTGTTTTATTCTCATTTTAATGTAAATGAAGGGATTGATATTCAGCTTC
CGAATTAGATTTTGATCTTTCTGTTCCTTAAATCCAGGGGATTGTAATTGATAACATGCT
GAGGCTTCTGTTTGCTTCACCCA