Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03310.t01
CDS Infomation

cds chromosome:12X:6:4132846:4141990:-1 gene:VIT_06s0004g03310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTATGAAAATGGGGTTAGGGAATTGGAGGCTGAGAGCTTCAAGGATCAGGTGAAG
GAGTTCTTGAAGGCCTCTGCGGAGATGGGCGTGGAGCTGGTGAAGGGGTGTAGAGATATA
GTGAAGCAGAGTCTGGGGAATGAGAATTCCTATGTTGTCAGGAAGTTTGGTGGGCATTGG
AACAGGCTGAGTCGGAGATTGAGCTTCTTGAATGAGTTCTTGCCTGAGGATCGTGATCCC
ACCCATGCCTGGTCGGTTGTGCTCTTTGTCTCCGTTCTTGCTTTTACAGCTCTGAATAAT
ACTGAATATGCTACGCCCACCCCATTGTTAAAGGAAGTATACATTCATCCCCCTAATGCA
AGCCGTATCTTACTTCCAGATGGTAGATATTTGGCATATCAAGAACAAGGTGTTCTAGCT
GAAAGAGCTAGATATTCGATGATGGCTCCTCATTCTTTTCTCTCCTCTCGACTTTCAGGA
ATACCTGGAGTTAAAGCTCCCTTGCTAGAAGAGTTTGGCATTCGCCTGGTCACATATGAC
CTTCCAGGTTTTGGGGAGAGTGATCCTCATCCCAATAGAAACCTTGAGTCATCAGCTCTG
GACATGTTATACTTAGCAAATGCTTTGGGTGTTAATGGCAAGTTCTGGGTGGTGGGGCAT
TCAGGCGGAAGCATGCATGCTTGGGCTGCTCTCAGATACATTCCTGATAGACTTGCAGGT
GCAGCCATGTTTGCTCCAGTGGTCAATCCATATGACCCCAGCATGACTAAGCAAGAGAGA
TATGGAATGTGGGAGAAATGGACATTCCGGAGGAAGTTAATGTACTTTCTAGCTCGGAGA
TTTCCTAGATTTCTTTCTTACTTGTATCGCAAAAGCTTCCTCTCAGGAAAGCATGGTCAA
ATTGATAAGTGGCTATCATTATCACTGGGAAAGAGGGATAAAGCTTTGATAGCAGAGCCG
ATTTTTGTGGAGTTCTGGCAGAGAGATGTAGAGGAATCAATCCGACAAGGAGATGCAAAA
CCATTTGTGGAGGAAGCTGTGATGCAGGTGTCAGATTGGGGTTTTAGTCTTGGGGAACTC
AAGATGCAGAAGAAACACCGAGGTAGTGGCATTCTTCATTGGCTCAAGTCTAAGTATAGT
CAGGAAGAGGAGGAATTGATGGGCTTCCTTGGCCCAATACACATATGGCAGGGAATGGAC
GATAGGGTCGTCCCACCCTCAATGACAGATTTTGTGCATCGGATTCTACCAGGGGCAACA
ATACATAAGCTCCCATATGAGGGTCACTTCACCTATTTCTATTTCTGTGACAAATGCCAT
AGACAGATATTCAACACACTTTTTGAAACCCCACAAGGGCCCCTCGTTAGTATTGAGGAA
GTAGATCAAACTCCCATTGAAGGGGGTGTCGAAGACGCGGAAGAGGTAACCCTTGGCGAT
TCTGCCACCAAGTCAGATCTCATTTTTATAGTTTAG

Peptide Sequence

PEP ID

VIT_06s0004g03310.t01
PEP Infomation

pep chromosome:12X:6:4132846:4141990:-1 gene:VIT_06s0004g03310 transcript:VIT_06s0004g03310.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEYENGVRELEAESFKDQVKEFLKASAEMGVELVKGCRDIVKQSLGNENSYVVRKFGGHW
NRLSRRLSFLNEFLPEDRDPTHAWSVVLFVSVLAFTALNNTEYATPTPLLKEVYIHPPNA
SRILLPDGRYLAYQEQGVLAERARYSMMAPHSFLSSRLSGIPGVKAPLLEEFGIRLVTYD
LPGFGESDPHPNRNLESSALDMLYLANALGVNGKFWVVGHSGGSMHAWAALRYIPDRLAG
AAMFAPVVNPYDPSMTKQERYGMWEKWTFRRKLMYFLARRFPRFLSYLYRKSFLSGKHGQ
IDKWLSLSLGKRDKALIAEPIFVEFWQRDVEESIRQGDAKPFVEEAVMQVSDWGFSLGEL
KMQKKHRGSGILHWLKSKYSQEEEELMGFLGPIHIWQGMDDRVVPPSMTDFVHRILPGAT
IHKLPYEGHFTYFYFCDKCHRQIFNTLFETPQGPLVSIEEVDQTPIEGGVEDAEEVTLGD
SATKSDLIFIV

Transcript Sequence

Transcript ID

VIT_06s0004g03310.t01
Transcript Infomation

cdna chromosome:12X:6:4132846:4141990:-1 gene:VIT_06s0004g03310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACACACACAGAAACAGCTCAACACCCCTTCCTTCACGTTCGTCAAGCATCTGTCCCCAAC
GACGCCGTTTCACCCTCCACGTCGCTTACATTCCTTGAAGAAATGTTGGCATTGGCGTGG
GGATTAAGCTGAGAGAATTGGAGAGAGTGGGATAATGTAAGTGAAGTCGATGGAGTATGA
AAATGGGGTTAGGGAATTGGAGGCTGAGAGCTTCAAGGATCAGGTGAAGGAGTTCTTGAA
GGCCTCTGCGGAGATGGGCGTGGAGCTGGTGAAGGGGTGTAGAGATATAGTGAAGCAGAG
TCTGGGGAATGAGAATTCCTATGTTGTCAGGAAGTTTGGTGGGCATTGGAACAGGCTGAG
TCGGAGATTGAGCTTCTTGAATGAGTTCTTGCCTGAGGATCGTGATCCCACCCATGCCTG
GTCGGTTGTGCTCTTTGTCTCCGTTCTTGCTTTTACAGCTCTGAATAATACTGAATATGC
TACGCCCACCCCATTGTTAAAGGAAGTATACATTCATCCCCCTAATGCAAGCCGTATCTT
ACTTCCAGATGGTAGATATTTGGCATATCAAGAACAAGGTGTTCTAGCTGAAAGAGCTAG
ATATTCGATGATGGCTCCTCATTCTTTTCTCTCCTCTCGACTTTCAGGAATACCTGGAGT
TAAAGCTCCCTTGCTAGAAGAGTTTGGCATTCGCCTGGTCACATATGACCTTCCAGGTTT
TGGGGAGAGTGATCCTCATCCCAATAGAAACCTTGAGTCATCAGCTCTGGACATGTTATA
CTTAGCAAATGCTTTGGGTGTTAATGGCAAGTTCTGGGTGGTGGGGCATTCAGGCGGAAG
CATGCATGCTTGGGCTGCTCTCAGATACATTCCTGATAGACTTGCAGGTGCAGCCATGTT
TGCTCCAGTGGTCAATCCATATGACCCCAGCATGACTAAGCAAGAGAGATATGGAATGTG
GGAGAAATGGACATTCCGGAGGAAGTTAATGTACTTTCTAGCTCGGAGATTTCCTAGATT
TCTTTCTTACTTGTATCGCAAAAGCTTCCTCTCAGGAAAGCATGGTCAAATTGATAAGTG
GCTATCATTATCACTGGGAAAGAGGGATAAAGCTTTGATAGCAGAGCCGATTTTTGTGGA
GTTCTGGCAGAGAGATGTAGAGGAATCAATCCGACAAGGAGATGCAAAACCATTTGTGGA
GGAAGCTGTGATGCAGGTGTCAGATTGGGGTTTTAGTCTTGGGGAACTCAAGATGCAGAA
GAAACACCGAGGTAGTGGCATTCTTCATTGGCTCAAGTCTAAGTATAGTCAGGAAGAGGA
GGAATTGATGGGCTTCCTTGGCCCAATACACATATGGCAGGGAATGGACGATAGGGTCGT
CCCACCCTCAATGACAGATTTTGTGCATCGGATTCTACCAGGGGCAACAATACATAAGCT
CCCATATGAGGGTCACTTCACCTATTTCTATTTCTGTGACAAATGCCATAGACAGATATT
CAACACACTTTTTGAAACCCCACAAGGGCCCCTCGTTAGTATTGAGGAAGTAGATCAAAC
TCCCATTGAAGGGGGTGTCGAAGACGCGGAAGAGGTAACCCTTGGCGATTCTGCCACCAA
GTCAGATCTCATTTTTATAGTTTAGTTTAACAAAGTCTGGTGTATATACTGCAGGCTTGC
CCCTTACCCATGGAGCAAAAAAATTTTTAAAAATAAATTGATAGTTTGTTCTAGTTTTCG
TTGTGTCCGTTGATGGATAGGTGCTGAAATATTTTTTGGAAGGAAATGAAAAGATGGTAA
TAATTGCTGAAATTGCACCGTGCATACCC