Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03260.t01
CDS Infomation

cds chromosome:12X:6:4035310:4037390:-1 gene:VIT_06s0004g03260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGTGTGCAGTGGGCGGGGTGTTGGGGCATCTTGAAGGAGGAGGAGAAGAGAGGCAG
GAGAGTGAGGGGGGAGAACACGAGTTGTTCTTGATGCATGACTCTAAGCAGATGGTGAAG
ACTGATGCTGGAGAGATGAGGGTGGTGAGGAGTGCCGCAGGCAGATCAATTGTAGAGAAG
CCGATGCATATTGGCTTCATTACTATGGAGCCTAAGTCTCTTTTCGTCCCCCAGTACCTT
GATTCCAGTTTGATCCTCTTCATTCGCAGAGGGGAAGCAAAGGTTGGATCAATCTACAAC
GATGAACTGGTGGAGAAGCAGTTGAAGATAGGGGATTTGTATACAATTCCTGCCGGTTCT
GCCTTCTACTTGGTTAACACAGGCGAGGGGCAGAGACTTCATATCATTTGCAGCATTGAC
ATGTCTGAGAGCTTGAAGATGGATACCTTCCAGTCTTTCTTCCTCGGGGGAGGGACACAT
CCCACATCGATTCTCACTGGGTTTGCTCCCGAGACGCTGTCAACTGCATTTAATATCTCG
ATGTCGGAACTGGAGGAGATCATGACCAGACAAGAAGGGGGCCCTATCATATACATAAAA
GATTCTCAGCAACCAAGCACATGGGCCAAATTCCTAGAAATGAAAACCCAAGATAAAGTC
AAACACCTGAAGAGAATTATGGGATTTGACGTCGAAACTGAACAGAAACATGGGACATGG
TGGTCATGGAGGAAGCTCCTGAACTCTGTAATTGGGAACGAAAACAAGAAGCAGCCTGTG
GAACCAACCGAGCCCTACAACCTCTATGACAGAAAACCCGATTTCAAGAACAGCTATGGA
TGGAGCATTGCTCTTGATGAGTCCGATTATTCGGCTCTCGCCGACTCCGGCGTCGGCATT
TACAGCGTCAACCTCACTGCGGGATCAATGATGGCTCCACATCTGAATCCAACAGCGACA
GAAATCGGGATCGTGTTGAAAGGATCAGGCACGGTAAAGGTCGTATTCCCGAACGGGACA
TCAGCGATGGACGCCAAAGTGCGTGAAGGCGACGTCTTCTGGGTGCCCAGATACTTCCCA
TTCTGTCAAATAGCATCAAGAACAGGCCCTTTTGAGTTCTTCGGATTCACGACATCAGCG
CGCAGAAACAGGCCACAGTTCCTGGCAGGAGCCAACTCGCTGCTCAAGAGCATGAGAGGC
TCAGAGTTTGCCATGGCCTTCGGTGTGAGCGAGGACAAGTACGATCACATGGTCAATTCT
CAGCGGGAAGCCGTCATCTTACCTTCAGCGGATGTTTCTCCACCAGATGAGAGGAAGAAG
GAGACTGGGACTGAGACTGAGAGGGTACTAAAGTTGATAAAGGGATTTGGGAATGATGTG
ATGATGGGGTTTTAG

Peptide Sequence

PEP ID

VIT_06s0004g03260.t01
PEP Infomation

pep chromosome:12X:6:4035310:4037390:-1 gene:VIT_06s0004g03260 transcript:VIT_06s0004g03260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MWCAVGGVLGHLEGGGEERQESEGGEHELFLMHDSKQMVKTDAGEMRVVRSAAGRSIVEK
PMHIGFITMEPKSLFVPQYLDSSLILFIRRGEAKVGSIYNDELVEKQLKIGDLYTIPAGS
AFYLVNTGEGQRLHIICSIDMSESLKMDTFQSFFLGGGTHPTSILTGFAPETLSTAFNIS
MSELEEIMTRQEGGPIIYIKDSQQPSTWAKFLEMKTQDKVKHLKRIMGFDVETEQKHGTW
WSWRKLLNSVIGNENKKQPVEPTEPYNLYDRKPDFKNSYGWSIALDESDYSALADSGVGI
YSVNLTAGSMMAPHLNPTATEIGIVLKGSGTVKVVFPNGTSAMDAKVREGDVFWVPRYFP
FCQIASRTGPFEFFGFTTSARRNRPQFLAGANSLLKSMRGSEFAMAFGVSEDKYDHMVNS
QREAVILPSADVSPPDERKKETGTETERVLKLIKGFGNDVMMGF

Transcript Sequence

Transcript ID

VIT_06s0004g03260.t01
Transcript Infomation

cdna chromosome:12X:6:4035310:4037390:-1 gene:VIT_06s0004g03260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGACAGTTACAGTAATTGCAAGAGAGAGAGAGAGGAGAGGCTACAGACGCCATGGGGAAA
GGAGCAACAGTACTACTATGGTGGGTGGTGCTTGTGATCATGTGGTGTGCAGTGGGCGGG
GTGTTGGGGCATCTTGAAGGAGGAGGAGAAGAGAGGCAGGAGAGTGAGGGGGGAGAACAC
GAGTTGTTCTTGATGCATGACTCTAAGCAGATGGTGAAGACTGATGCTGGAGAGATGAGG
GTGGTGAGGAGTGCCGCAGGCAGATCAATTGTAGAGAAGCCGATGCATATTGGCTTCATT
ACTATGGAGCCTAAGTCTCTTTTCGTCCCCCAGTACCTTGATTCCAGTTTGATCCTCTTC
ATTCGCAGAGGGGAAGCAAAGGTTGGATCAATCTACAACGATGAACTGGTGGAGAAGCAG
TTGAAGATAGGGGATTTGTATACAATTCCTGCCGGTTCTGCCTTCTACTTGGTTAACACA
GGCGAGGGGCAGAGACTTCATATCATTTGCAGCATTGACATGTCTGAGAGCTTGAAGATG
GATACCTTCCAGTCTTTCTTCCTCGGGGGAGGGACACATCCCACATCGATTCTCACTGGG
TTTGCTCCCGAGACGCTGTCAACTGCATTTAATATCTCGATGTCGGAACTGGAGGAGATC
ATGACCAGACAAGAAGGGGGCCCTATCATATACATAAAAGATTCTCAGCAACCAAGCACA
TGGGCCAAATTCCTAGAAATGAAAACCCAAGATAAAGTCAAACACCTGAAGAGAATTATG
GGATTTGACGTCGAAACTGAACAGAAACATGGGACATGGTGGTCATGGAGGAAGCTCCTG
AACTCTGTAATTGGGAACGAAAACAAGAAGCAGCCTGTGGAACCAACCGAGCCCTACAAC
CTCTATGACAGAAAACCCGATTTCAAGAACAGCTATGGATGGAGCATTGCTCTTGATGAG
TCCGATTATTCGGCTCTCGCCGACTCCGGCGTCGGCATTTACAGCGTCAACCTCACTGCG
GGATCAATGATGGCTCCACATCTGAATCCAACAGCGACAGAAATCGGGATCGTGTTGAAA
GGATCAGGCACGGTAAAGGTCGTATTCCCGAACGGGACATCAGCGATGGACGCCAAAGTG
CGTGAAGGCGACGTCTTCTGGGTGCCCAGATACTTCCCATTCTGTCAAATAGCATCAAGA
ACAGGCCCTTTTGAGTTCTTCGGATTCACGACATCAGCGCGCAGAAACAGGCCACAGTTC
CTGGCAGGAGCCAACTCGCTGCTCAAGAGCATGAGAGGCTCAGAGTTTGCCATGGCCTTC
GGTGTGAGCGAGGACAAGTACGATCACATGGTCAATTCTCAGCGGGAAGCCGTCATCTTA
CCTTCAGCGGATGTTTCTCCACCAGATGAGAGGAAGAAGGAGACTGGGACTGAGACTGAG
AGGGTACTAAAGTTGATAAAGGGATTTGGGAATGATGTGATGATGGGGTTTTAGAAAAAC
TATGGAGCTTTTCTTTTTTATGTTCAGTCTAGCGGTTTCAGAGTGGTAGAGTGTTTTTCT
TTATCTCTGTGGAATCTTTTCCTCAGCCTTCAATAATTAATTAATTTATTTAAAAATGAA
AAAA