Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03190.t01
CDS Infomation

cds chromosome:12X:6:3969995:3974786:1 gene:VIT_06s0004g03190 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta [Source:UniProtKB/TrEMBL;Acc:D7SKV3]
Sequence

ATGAACTTGATGGATTCGTCTCATTCCAACCCCATGTCGCTGTGCTCTCAAGCAGACTCC
CAGAGGACTCTGTACCCGTATGTTACTGGAACATCTGTGATTGGCGTTAAGTACAAAGAT
GGAATCCTTATGGCTGCTGATATGGGAGGTTCTTATGGGTCTACCCTTCGTTACAAGAGT
GTGGAGCGAATGAAGCCTATTGGAAAGCACTCTCTTCTTGGAGCAAGTGGAGAAATAAGT
GATTTCCAGGAGATTTTACATTATCTTGATGAACTTATCTTGTATGACAATATGTGGGAT
GATGGGAACTCTTTGGGGCCTAAGGAGGTGCACAGCTACTTAACTCGGGTGATGTACAAT
AGGCGCAATAAGTTCAATCCTCTGTGGAACTCACTTGTCCTTGGTGGTGTGAAAAATGGA
CAGAAATATCTTGGCACGGTTAGTATGATTGGTGTACATTTTGAGGACAATCATGTGGCA
ACTGGATTTGGAAATCACCTTGCACGACCAATTCTTCGTGATGAGTGGCATGAAGACTTG
AGTTTTGAAGATGGTGTTAAGTTACTGGAGAAGTGCATGCGTGTACTTCTGTATCGAGAT
AGGTCTGCTGTCAACAAGCTTCAGATAGCAAAAATAACAGAAGAAGGTGTAACTATTTCT
CAGCCTTACTCCTTGAAGACTTTCTGGGGATTCTCTGCTTTCCAGAATCCAACTGTGGGT
GCTGAAGGATCTTGGTAG

Peptide Sequence

PEP ID

VIT_06s0004g03190.t01
PEP Infomation

pep chromosome:12X:6:3969995:3974786:1 gene:VIT_06s0004g03190 transcript:VIT_06s0004g03190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta [Source:UniProtKB/TrEMBL;Acc:D7SKV3]
Sequence

MNLMDSSHSNPMSLCSQADSQRTLYPYVTGTSVIGVKYKDGILMAADMGGSYGSTLRYKS
VERMKPIGKHSLLGASGEISDFQEILHYLDELILYDNMWDDGNSLGPKEVHSYLTRVMYN
RRNKFNPLWNSLVLGGVKNGQKYLGTVSMIGVHFEDNHVATGFGNHLARPILRDEWHEDL
SFEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWGFSAFQNPTVG
AEGSW

Transcript Sequence

Transcript ID

VIT_06s0004g03190.t01
Transcript Infomation

cdna chromosome:12X:6:3969995:3974786:1 gene:VIT_06s0004g03190 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta [Source:UniProtKB/TrEMBL;Acc:D7SKV3]
Sequence

AACAGAAGTCGAAACCTAGATCCATTTATTCAATCTTCAAATACCCGGAAAGATATATGA
ACTTGATGGATTCGTCTCATTCCAACCCCATGTCGCTGTGCTCTCAAGCAGACTCCCAGA
GGACTCTGTACCCGTATGTTACTGGAACATCTGTGATTGGCGTTAAGTACAAAGATGGAA
TCCTTATGGCTGCTGATATGGGAGGTTCTTATGGGTCTACCCTTCGTTACAAGAGTGTGG
AGCGAATGAAGCCTATTGGAAAGCACTCTCTTCTTGGAGCAAGTGGAGAAATAAGTGATT
TCCAGGAGATTTTACATTATCTTGATGAACTTATCTTGTATGACAATATGTGGGATGATG
GGAACTCTTTGGGGCCTAAGGAGGTGCACAGCTACTTAACTCGGGTGATGTACAATAGGC
GCAATAAGTTCAATCCTCTGTGGAACTCACTTGTCCTTGGTGGTGTGAAAAATGGACAGA
AATATCTTGGCACGGTTAGTATGATTGGTGTACATTTTGAGGACAATCATGTGGCAACTG
GATTTGGAAATCACCTTGCACGACCAATTCTTCGTGATGAGTGGCATGAAGACTTGAGTT
TTGAAGATGGTGTTAAGTTACTGGAGAAGTGCATGCGTGTACTTCTGTATCGAGATAGGT
CTGCTGTCAACAAGCTTCAGATAGCAAAAATAACAGAAGAAGGTGTAACTATTTCTCAGC
CTTACTCCTTGAAGACTTTCTGGGGATTCTCTGCTTTCCAGAATCCAACTGTGGGTGCTG
AAGGATCTTGGTAGCTAGCCAGCTGCATAGCTTCTTAAGATTCAGATCTTCCAGTAACAG
ATGTCGGTTAAGATACATGAAGCTGCCAAGTATGGGCTAAATTTGAAAGTTGATTTGTCT
TTATGTTTTGGAAGGCAAATGCTATGGTTTGTTGAACTCTCTATGTGTACTGCTAAATAG
TTTTGAAGATGGGCTGTTGGATTATTAGAACAAGAGATTCCTTGAAATCATTAAACTTTG
CTCATCATTATATTTGGCCTTTTTTGTTTGAAATGGTGTTATTCATCAGTTAAATGTAA