Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03070.t01
CDS Infomation

cds chromosome:12X:6:3815583:3818141:-1 gene:VIT_06s0004g03070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGAAGATGGGCTCACACTTCCCTCTTCCATCAGAGGTTTTGTTCAAGAACCAAAT
TCAAACCCTAACCCTAACCCTAGTGCAAATCCAGTGAAGAAGAAGAGAAATTTACCAGGA
ACGCCAGATCCAGAAGCAGAAGTCATCGCTCTATCACCAAAATCACTCATGGCCACGAAC
CGATTCATCTGTGAAATCTGTAACAAGGGTTTCCAGAGAGACCAGAACTTGCAGCTTCAC
AGGCGAGGCCACAATCTTCCATGGAAGCTCCGGCAAAGAACAAGCAAGGAGGTCCGGAAG
AAGGTGTACATATGCCCGGAAAAGTCCTGTGTGCACCACAATCCAACCAGGGCCCTAGGA
GACCTCACCGGAATAAAGAAGCATTACAGTAGAAAACACGGTGAGAAGAAGTGGAAGTGC
GAGAAATGTTCCAAGAAATATGCAGTTCAGTCAGATTGGAAAGCTCATAGTAAAATTTGT
GGCACCAGAGAGTACAAATGCGACTGTGGAACTCTCTTCTCCAGGAAGGACAGCTTCATC
ACCCACAGGGCCTTCTGTGATGCTTTAGCTGAGGAAAGTGCCAGGCTCACTTCAGTTTCA
GCACCGAATCCAATCTTCAGAAATGAGTTGATGAATGGGAGCATTAGCAACCCACAAGCC
CACATAATCCCCCAATTTTCCTCAGTTTTTCGGCCTGAATTTGTGGGCTCGGAGCAGCTG
GTTGGGCATCTCAATGCAGATGGGCAGAAGCCAAGGTTGCCACTGTGGCTGGACCATGCC
AATTCCCACCTCAACAACCCCATTGGGGTTAACACTAATGGTTCCTTTTTGGCACCGACA
TCCGCTGGGTTGCCTGAAATGGTGCAAACAGCGCCCATGAGTATGTATGGATCACCGGCA
TCATCACAGAATCAGTGGCTCCAAAGGTGTTCAGAAGCGTCATTTACTTCATCCACATTG
CCACGGGTGTTAAAGGAGGAGGAAGAGAACAAAGGAAATTTGTCTGAGAGCATAACTTCC
TTGTTCTCAAGTAATCAGAATCAACAAGAAAGCTCGGCTCACATGTCAGCAACCGCACTC
TTGCAGAAAGCTGCCCAAATGGGGTCTACAAAGAGCAACTCAGCCTTCTTCAGTACTACA
GGATTCGGTTCCATCAACTCATCCCTCTCCAATACTACGCCCTTCAGCTCTTATCCCCAT
GGCAGAAGCAACAACCAAGTCCACAAGTTTCTTATCAGGCAGTCAAACCAATCCGACAGC
ATGAACCAACTCATCAACTCAACATCACCCTCCTCCACCATGGGAGATGGACTGCTGATG
GGTGATATGAACTCAACCCCATTATTCCATGCAAGTTCCAATGAAGTTGAACGCGGTCTA
ACCAGAGATTTTCTGGGTGTGGGAAGTGATGCAAGCAGACCCTTCTTGCAACAAGAGCTG
GCTAAGTTTGCTTCAATGGGTTCAGCCATGGGCATGAGCCAATACAGTGGAAACCACTGA

Peptide Sequence

PEP ID

VIT_06s0004g03070.t01
PEP Infomation

pep chromosome:12X:6:3815583:3818141:-1 gene:VIT_06s0004g03070 transcript:VIT_06s0004g03070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEDGLTLPSSIRGFVQEPNSNPNPNPSANPVKKKRNLPGTPDPEAEVIALSPKSLMATN
RFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEVRKKVYICPEKSCVHHNPTRALG
DLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRKDSFI
THRAFCDALAEESARLTSVSAPNPIFRNELMNGSISNPQAHIIPQFSSVFRPEFVGSEQL
VGHLNADGQKPRLPLWLDHANSHLNNPIGVNTNGSFLAPTSAGLPEMVQTAPMSMYGSPA
SSQNQWLQRCSEASFTSSTLPRVLKEEEENKGNLSESITSLFSSNQNQQESSAHMSATAL
LQKAAQMGSTKSNSAFFSTTGFGSINSSLSNTTPFSSYPHGRSNNQVHKFLIRQSNQSDS
MNQLINSTSPSSTMGDGLLMGDMNSTPLFHASSNEVERGLTRDFLGVGSDASRPFLQQEL
AKFASMGSAMGMSQYSGNH

Transcript Sequence

Transcript ID

VIT_06s0004g03070.t01
Transcript Infomation

cdna chromosome:12X:6:3815583:3818141:-1 gene:VIT_06s0004g03070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGAACTAGGTCCAATTGGTTCCCTCTTTTTTTCCCTCTCTTTTTGGTTCTTCTGGGAAG
TGGCTGGAAATCTAGTGAGATTTATTGGGTTGTGTTCATCAGCAAAGGTTTTGTTATTTT
GTTCTATTTTTGGGGTTGTACTGTTGTAGCTTTTTGGGTGGTTCTTCTGGGTGTAAGTAG
TTTAGGACATACCCAGTTGCTTGAAATTCAGTTGCAAATGATGGCTGAAGATGGGCTCAC
ACTTCCCTCTTCCATCAGAGGTTTTGTTCAAGAACCAAATTCAAACCCTAACCCTAACCC
TAGTGCAAATCCAGTGAAGAAGAAGAGAAATTTACCAGGAACGCCAGATCCAGAAGCAGA
AGTCATCGCTCTATCACCAAAATCACTCATGGCCACGAACCGATTCATCTGTGAAATCTG
TAACAAGGGTTTCCAGAGAGACCAGAACTTGCAGCTTCACAGGCGAGGCCACAATCTTCC
ATGGAAGCTCCGGCAAAGAACAAGCAAGGAGGTCCGGAAGAAGGTGTACATATGCCCGGA
AAAGTCCTGTGTGCACCACAATCCAACCAGGGCCCTAGGAGACCTCACCGGAATAAAGAA
GCATTACAGTAGAAAACACGGTGAGAAGAAGTGGAAGTGCGAGAAATGTTCCAAGAAATA
TGCAGTTCAGTCAGATTGGAAAGCTCATAGTAAAATTTGTGGCACCAGAGAGTACAAATG
CGACTGTGGAACTCTCTTCTCCAGGAAGGACAGCTTCATCACCCACAGGGCCTTCTGTGA
TGCTTTAGCTGAGGAAAGTGCCAGGCTCACTTCAGTTTCAGCACCGAATCCAATCTTCAG
AAATGAGTTGATGAATGGGAGCATTAGCAACCCACAAGCCCACATAATCCCCCAATTTTC
CTCAGTTTTTCGGCCTGAATTTGTGGGCTCGGAGCAGCTGGTTGGGCATCTCAATGCAGA
TGGGCAGAAGCCAAGGTTGCCACTGTGGCTGGACCATGCCAATTCCCACCTCAACAACCC
CATTGGGGTTAACACTAATGGTTCCTTTTTGGCACCGACATCCGCTGGGTTGCCTGAAAT
GGTGCAAACAGCGCCCATGAGTATGTATGGATCACCGGCATCATCACAGAATCAGTGGCT
CCAAAGGTGTTCAGAAGCGTCATTTACTTCATCCACATTGCCACGGGTGTTAAAGGAGGA
GGAAGAGAACAAAGGAAATTTGTCTGAGAGCATAACTTCCTTGTTCTCAAGTAATCAGAA
TCAACAAGAAAGCTCGGCTCACATGTCAGCAACCGCACTCTTGCAGAAAGCTGCCCAAAT
GGGGTCTACAAAGAGCAACTCAGCCTTCTTCAGTACTACAGGATTCGGTTCCATCAACTC
ATCCCTCTCCAATACTACGCCCTTCAGCTCTTATCCCCATGGCAGAAGCAACAACCAAGT
CCACAAGTTTCTTATCAGGCAGTCAAACCAATCCGACAGCATGAACCAACTCATCAACTC
AACATCACCCTCCTCCACCATGGGAGATGGACTGCTGATGGGTGATATGAACTCAACCCC
ATTATTCCATGCAAGTTCCAATGAAGTTGAACGCGGTCTAACCAGAGATTTTCTGGGTGT
GGGAAGTGATGCAAGCAGACCCTTCTTGCAACAAGAGCTGGCTAAGTTTGCTTCAATGGG
TTCAGCCATGGGCATGAGCCAATACAGTGGAAACCACTGAACCACATAGATATATGTTGT
AAGAGACTCTCCTTGTATTCCAATCATAAACTATGAAAACTAGCTAGTTTAAGATCAGCA
ACATACACTTAGAATCAAAATCAGAATCAAACCCTTTGTATTGGTGAAAACAACACCGGA
GGGAAAGAGAGAGAAAAGCGACTTTGCAATTGCAGGGGATCGGGAGAGGGAGAGAGAGTG
AGAGCCGAGTTCTGCATGTGAGTAATTTTCTTACTTTCACTGACGTTGATTGCCTTATCA
TCACTGTACTGTGACTGTTTCTTGACACAGCCACATTTGAGCCGTAGATTTGAGACAATA
ATGGTGTCATCTGGTGGGACCTACAATGTATGGCCTGCACTTACTTTGTACCTTCACTAT
AAATTTGAAAGGGCCGGTGACCCAGTCTGTTTTAGCGTGA