Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g03040.t01
CDS Infomation

cds chromosome:12X:6:3794154:3802422:-1 gene:VIT_06s0004g03040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATCAACAGCAGCAACATCAACGGTGGGATGTCGTCGCCGTCATCGTCGTCTGTCAAC
CCTCGTTCGCCGGGCCTTAAGACCTACTTCAAAACGCCCGAGGGCCGCTACAAGCTCCAT
TACGAGAAGACTCATCCCTCCAGTCTTCTTCAATACCCTCATGGAAAATCCGTCACTCAG
GTAACCCTTGCGTATCTGAAGGAGAAGCAGGCACAGCTGGCGCCAACACCAAGCTCGAGT
ATGAGTGCCTCCAGTGGAGTGAGATTTGCAGCGGCCAGGTTCTTAGGGGGAGGTAATGGT
GGTCGAACTCTTAGTTTCGTGGGAGGGAATGGCGCAAGTAAATCGTTTACTGGAACCAGT
AGGAGCAGTTCATTGGGAGGTTTGAGTAATTGTAATTCAATGCTTACTTCTAATTATGAT
GGGAAAGGGACATATCTTATATTCAATTTAGGGGACACAATCTATATCAGCGATTTTAAT
TCACAGGATAAGGATCCTATAAAAGCAATACATTTTAGCAATTCAAACCCTGTCTGCCAT
GCATTTGATGCAGAAGCTAAAGATGGGCATGACTTGCTTATTGGATTGAATTCTGGGGAT
GTCTATTCGGTCTCTCTGAGGCAGCAATTACAAGATTTTGGGAAGAAACTTGTTGGTGCC
CAGCATTATAACAAAGATGGTTCTGTTAGTACCAGTCGATGTACTAGCATTGCTTGGATT
CCTCAAGGCGATGGTGCTTTTGCTGTTGCTCACTCTGATGGAAACTTGTACGTGTATGAA
AAGGGTAAGGACGGAACAGGTGATTCTTCCTTCCCAGTTATCAAGGATCAAACTCAGTTT
ACTGTTGCACATGCACGGTCCAGTAAGAGCAATCCAGTTGCCAGATGGCATATCTGCCAA
GGTTCAATCAATAGCATTGCTTTCTCATCTGATGGGACATATTTGGCAACTGTTGGTAGA
GATGGTTATTTACGGGTATTTGACTACTCAAAAGAACAACTAATATGTGGTGGAAAAAGT
TATTATGGCGCTCTTCTGTGTTGTGCCTGGAGCTTGGATGGAAAATACATTTTGACTGGT
GGTGAAGATGATCTAGTTCAAGTTTGGAGTATGGAAGATCGAAAGGTAGTAGCATGGGGC
GAGGGGCACAGCTCATGGGTGAGTGGAGTGGCTTTTGACTCATATTGGTCATCACCATCT
TCAGATGGCACTGGGGAAAGTGTGATGTACCGATTTGGTTCTGTTGGTCAGGACACTCAG
TTGCTTCTATGGGACCTGTCAATGGAGGAGATTGTAGTTCCACTTCGCAGGTGTCCCCCT
GGTGGTTCCCCCACATTCAGCAGTGGAAGCCAGTCATCTCATTGGGATAGCATTTCTCCA
GTGGGCACTCTCCAACCTGCTCCAAGCATGCAAGATGTTCCAAAACTCTCCCCAGTAGTT
GCCCATCGTGTCCATTCTGAACCTCTATCTGGCTTAATTTTTACCCAGGAATCTATTCTC
ACTGCATGTCGAGAAGGGCATGTGAAAATTTGGATGAGACCCAGGTCCTCTGAAAGCCCA
CCGAGTAACTCAGAAGGTCTTTTAAGTACTAGTTCAAAGGAGAAGCTGCTAATGCCTGGC
AAGGTTGGCGGATCTAGTTTCAAATAA

Peptide Sequence

PEP ID

VIT_06s0004g03040.t01
PEP Infomation

pep chromosome:12X:6:3794154:3802422:-1 gene:VIT_06s0004g03040 transcript:VIT_06s0004g03040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MINSSNINGGMSSPSSSSVNPRSPGLKTYFKTPEGRYKLHYEKTHPSSLLQYPHGKSVTQ
VTLAYLKEKQAQLAPTPSSSMSASSGVRFAAARFLGGGNGGRTLSFVGGNGASKSFTGTS
RSSSLGGLSNCNSMLTSNYDGKGTYLIFNLGDTIYISDFNSQDKDPIKAIHFSNSNPVCH
AFDAEAKDGHDLLIGLNSGDVYSVSLRQQLQDFGKKLVGAQHYNKDGSVSTSRCTSIAWI
PQGDGAFAVAHSDGNLYVYEKGKDGTGDSSFPVIKDQTQFTVAHARSSKSNPVARWHICQ
GSINSIAFSSDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSLDGKYILTG
GEDDLVQVWSMEDRKVVAWGEGHSSWVSGVAFDSYWSSPSSDGTGESVMYRFGSVGQDTQ
LLLWDLSMEEIVVPLRRCPPGGSPTFSSGSQSSHWDSISPVGTLQPAPSMQDVPKLSPVV
AHRVHSEPLSGLIFTQESILTACREGHVKIWMRPRSSESPPSNSEGLLSTSSKEKLLMPG
KVGGSSFK

Transcript Sequence

Transcript ID

VIT_06s0004g03040.t01
Transcript Infomation

cdna chromosome:12X:6:3794154:3802422:-1 gene:VIT_06s0004g03040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGAGGAGGATTTGGATGCGATGAACTCATGCTTCACCATCCATCACAACCGTCGATAT
GATCAACAGCAGCAACATCAACGGTGGGATGTCGTCGCCGTCATCGTCGTCTGTCAACCC
TCGTTCGCCGGGCCTTAAGACCTACTTCAAAACGCCCGAGGGCCGCTACAAGCTCCATTA
CGAGAAGACTCATCCCTCCAGTCTTCTTCAATACCCTCATGGAAAATCCGTCACTCAGGT
AACCCTTGCGTATCTGAAGGAGAAGCAGGCACAGCTGGCGCCAACACCAAGCTCGAGTAT
GAGTGCCTCCAGTGGAGTGAGATTTGCAGCGGCCAGGTTCTTAGGGGGAGGTAATGGTGG
TCGAACTCTTAGTTTCGTGGGAGGGAATGGCGCAAGTAAATCGTTTACTGGAACCAGTAG
GAGCAGTTCATTGGGAGGTTTGAGTAATTGTAATTCAATGCTTACTTCTAATTATGATGG
GAAAGGGACATATCTTATATTCAATTTAGGGGACACAATCTATATCAGCGATTTTAATTC
ACAGGATAAGGATCCTATAAAAGCAATACATTTTAGCAATTCAAACCCTGTCTGCCATGC
ATTTGATGCAGAAGCTAAAGATGGGCATGACTTGCTTATTGGATTGAATTCTGGGGATGT
CTATTCGGTCTCTCTGAGGCAGCAATTACAAGATTTTGGGAAGAAACTTGTTGGTGCCCA
GCATTATAACAAAGATGGTTCTGTTAGTACCAGTCGATGTACTAGCATTGCTTGGATTCC
TCAAGGCGATGGTGCTTTTGCTGTTGCTCACTCTGATGGAAACTTGTACGTGTATGAAAA
GGGTAAGGACGGAACAGGTGATTCTTCCTTCCCAGTTATCAAGGATCAAACTCAGTTTAC
TGTTGCACATGCACGGTCCAGTAAGAGCAATCCAGTTGCCAGATGGCATATCTGCCAAGG
TTCAATCAATAGCATTGCTTTCTCATCTGATGGGACATATTTGGCAACTGTTGGTAGAGA
TGGTTATTTACGGGTATTTGACTACTCAAAAGAACAACTAATATGTGGTGGAAAAAGTTA
TTATGGCGCTCTTCTGTGTTGTGCCTGGAGCTTGGATGGAAAATACATTTTGACTGGTGG
TGAAGATGATCTAGTTCAAGTTTGGAGTATGGAAGATCGAAAGGTAGTAGCATGGGGCGA
GGGGCACAGCTCATGGGTGAGTGGAGTGGCTTTTGACTCATATTGGTCATCACCATCTTC
AGATGGCACTGGGGAAAGTGTGATGTACCGATTTGGTTCTGTTGGTCAGGACACTCAGTT
GCTTCTATGGGACCTGTCAATGGAGGAGATTGTAGTTCCACTTCGCAGGTGTCCCCCTGG
TGGTTCCCCCACATTCAGCAGTGGAAGCCAGTCATCTCATTGGGATAGCATTTCTCCAGT
GGGCACTCTCCAACCTGCTCCAAGCATGCAAGATGTTCCAAAACTCTCCCCAGTAGTTGC
CCATCGTGTCCATTCTGAACCTCTATCTGGCTTAATTTTTACCCAGGAATCTATTCTCAC
TGCATGTCGAGAAGGGCATGTGAAAATTTGGATGAGACCCAGGTCCTCTGAAAGCCCACC
GAGTAACTCAGAAGGTCTTTTAAGTACTAGTTCAAAGGAGAAGCTGCTAATGCCTGGCAA
GGTTGGCGGATCTAGTTTCAAATAATTTAAGAAAAAAAATATAAAAATAAAATAAAATAA
AATGAGTTATTTCCAAAAGCATTTTCCACGGAGTTGATTCTCTGTTTGAAAATATGACTA
TTTATGCCTTTCTGCCCAGTTGGTTTCTTCAGATTGCCATGTGTTACAAATGTTGGGTTG
GGTCATTGAGTCAATCAACATGAGCATGTGCAGAGAGATTAACCAACTGGTTCTGCTGTA
TATTCTCACGGGTGACATTAAATTAATGGCACTGAGATTGAGAGATAGAGATGTTTAGTG
AAAATACACAGGCTATACGAAGTGACCCCTTGTTGCTGCGATGTTTCTAATTATAGGTAG
TAATAAGGGAAGTTGTTCCATGGGAATCTCTTTTAAGGCTTGTATTTGAATCCCACCTTT
CAAAAGATATCATGAATACAGAGGGATTTCTATTTGCTGTTTAATGTTCTTCTGAATTTC
CAAATTTTGCCATGTTGAACTCTCTAAATTCAAGTTCCCAAGTAGAAGGATTTTGTAGGC
CTAGTTTGTTATGCCTCTTAAGTGGGTGTTTTTATACACTGCAGAGTATTTTTTGTGTTT