Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g02970.t01
CDS Infomation

cds chromosome:12X:6:3700439:3704657:-1 gene:VIT_06s0004g02970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAACACGGGAAGCAGTCGCCGGCGACACCAGCGGAGCCACCGCAACCACCCAGCT
CTGCCGCCTCAGCTATCACCCCAACCTGAAATTACTGCAAACAGATACGTTTTTGCCGCT
GCCACAGCTTACACATCAGCGTACCCTAACCCTAATCAACCTTACTACTATAATTACAAT
GGTCACTACCCTCCTGTGCCGGTACCGTTATCGGGTTCGTACACCCGCCTTCATCGCGCT
GGCGGTGCAATCCCAAATTGGGTTGGTGGGCACCAACCTTGCGGGGTGGCTCCGCCCCCA
CCTGCCCCTTATGTTGAGCATCAGAAGGCAATTACTATCCGAAACGATGTGAATATTAAA
AAAGAAACATTGAGAGTTGAACCAGATGAAGAGAATCCGGGGAAGTTTCTGGTTGCTTTC
ACTTTTGATGCTACTGCAGCTGGAAGCATCACAGTTGTATTTTTTGGCAAAGAAGGCATT
AGCGGTGACCTGATTACAGTGAAGGAAGGCGTGATTGAACCTGTGACGGTGTCTTTCCAG
CAAGGTCTTGATCAGAAGTTCAAACAACCTTCTGGAACTGGGATTGACTTCTCAATGTTT
GAGGAAACAGAGTTAATGCAGGAGAGTGATATCAAAGTTTGTCCTCTCCTGGTGAAGGCT
GGGGCATACCCATTGGACCATAGCCAATCAGAAGGAAATCTGACTGGGAATTCTCAGATC
ACCCAGGCTGTGTTTGAGAAGGAGAAAGGTGTACAACAAGTGCGGGTTGTGAAACAGATA
CTGTGGGCAGAGGGGATGAGATATGAGCTGCAGGAGATTTTTGGGATTGGGAATTCTGTT
GATGACAATGCTGATGGTACTGATTCTGGGAAAGAGTGTGTCATCTGCTTGTCAGAACCA
AGAGACACAACTGTCCTCCCTTGCAGACACATGTGTATGTGTGGTGGGTGTGCCAAGGTT
TTGAGGTTCCAGATGAACCGATGCCCTATTTGCCGACAACCAGTTGAGCAGCTCCTAGAG
ATCAAGGTAAACAACAAATCTGACGTGTGA

Peptide Sequence

PEP ID

VIT_06s0004g02970.t01
PEP Infomation

pep chromosome:12X:6:3700439:3704657:-1 gene:VIT_06s0004g02970 transcript:VIT_06s0004g02970.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGNTGSSRRRHQRSHRNHPALPPQLSPQPEITANRYVFAAATAYTSAYPNPNQPYYYNYN
GHYPPVPVPLSGSYTRLHRAGGAIPNWVGGHQPCGVAPPPPAPYVEHQKAITIRNDVNIK
KETLRVEPDEENPGKFLVAFTFDATAAGSITVVFFGKEGISGDLITVKEGVIEPVTVSFQ
QGLDQKFKQPSGTGIDFSMFEETELMQESDIKVCPLLVKAGAYPLDHSQSEGNLTGNSQI
TQAVFEKEKGVQQVRVVKQILWAEGMRYELQEIFGIGNSVDDNADGTDSGKECVICLSEP
RDTTVLPCRHMCMCGGCAKVLRFQMNRCPICRQPVEQLLEIKVNNKSDV

Transcript Sequence

Transcript ID

VIT_06s0004g02970.t01
Transcript Infomation

cdna chromosome:12X:6:3700439:3704657:-1 gene:VIT_06s0004g02970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTTTCCAAACGGATCGCAACTGCTAACCCCACCATCCGCACAATCCATTCCCAAGAGTA
AAGAAATGGGAAACACGGGAAGCAGTCGCCGGCGACACCAGCGGAGCCACCGCAACCACC
CAGCTCTGCCGCCTCAGCTATCACCCCAACCTGAAATTACTGCAAACAGATACGTTTTTG
CCGCTGCCACAGCTTACACATCAGCGTACCCTAACCCTAATCAACCTTACTACTATAATT
ACAATGGTCACTACCCTCCTGTGCCGGTACCGTTATCGGGTTCGTACACCCGCCTTCATC
GCGCTGGCGGTGCAATCCCAAATTGGGTTGGTGGGCACCAACCTTGCGGGGTGGCTCCGC
CCCCACCTGCCCCTTATGTTGAGCATCAGAAGGCAATTACTATCCGAAACGATGTGAATA
TTAAAAAAGAAACATTGAGAGTTGAACCAGATGAAGAGAATCCGGGGAAGTTTCTGGTTG
CTTTCACTTTTGATGCTACTGCAGCTGGAAGCATCACAGTTGTATTTTTTGGCAAAGAAG
GCATTAGCGGTGACCTGATTACAGTGAAGGAAGGCGTGATTGAACCTGTGACGGTGTCTT
TCCAGCAAGGTCTTGATCAGAAGTTCAAACAACCTTCTGGAACTGGGATTGACTTCTCAA
TGTTTGAGGAAACAGAGTTAATGCAGGAGAGTGATATCAAAGTTTGTCCTCTCCTGGTGA
AGGCTGGGGCATACCCATTGGACCATAGCCAATCAGAAGGAAATCTGACTGGGAATTCTC
AGATCACCCAGGCTGTGTTTGAGAAGGAGAAAGGTGTACAACAAGTGCGGGTTGTGAAAC
AGATACTGTGGGCAGAGGGGATGAGATATGAGCTGCAGGAGATTTTTGGGATTGGGAATT
CTGTTGATGACAATGCTGATGGTACTGATTCTGGGAAAGAGTGTGTCATCTGCTTGTCAG
AACCAAGAGACACAACTGTCCTCCCTTGCAGACACATGTGTATGTGTGGTGGGTGTGCCA
AGGTTTTGAGGTTCCAGATGAACCGATGCCCTATTTGCCGACAACCAGTTGAGCAGCTCC
TAGAGATCAAGGTAAACAACAAATCTGACGTGTGAGGACCATATGATGTTGCTATAGGAT
GGTCTCATAGGACTTCTCAACAATATGTCTATAGACTAGAGGTAAGATGCAGCATGAAGG
TTTGGAGGCCTTGCTTTGGTTCTAATGCAATGCTTCTAATGTGGATGTTGCACTGGAAAT
AGTGAGAGTTAGATACTTCCAATACATACAGAAAATCATGTTTGCTTTGGAAATAATTTT
GCTGCAGGAAAGAAATTCCACTGTAAGCATGTTGATTCATGGTGTTTCCTTCTGATTGTC
TCTGGGATTTTTAAGGAAATTGAAGTTCTAACACTCTACCCATCTGCCTCAAAATGTGAG
GAGAAAACGACT