Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g02930.t01
CDS Infomation

cds chromosome:12X:6:3652219:3658239:-1 gene:VIT_06s0004g02930 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGAGGTGAGGAAAAACCAGTGGCTGAAGGGCATGATGTGGATGAAGGTGAAAGAGCG
GTTGCTATTCCAATTCAGGAGGTTGAAGATTCAACTGGAATAACTGAAGAAACACCACAT
TTTCAGCAATGGAGGCGGCAAAACCTCTTCCTAGAGATACCCTCAAGAGAAATGGAAGCC
TCCTCTCAAGATTCTGTTAGAATAAAGATGCCTCCAACACCAAGTCCGACTCCAAAAAAA
GTAAATTTCTTTCTGACACCTAGCCCAAGTGATACAAGAGTAACTGGGTCTCCAGGTCCT
TCTGCTACTAAAGGTAAATCATCCAAAAAAAGCCTCCTACCAAAATTGAGCTTTAAGAAT
CGGAGTGCTACTTCGGATAGCGATAAGGCTGCTAACCTAGCTCTAGGAGGTTCATCTACA
ACCTCACGAGAAAAACCCTCAATCTCAAGGTCATTGTCACTTTCAAAGATATTCACTCCT
AAAATGAATAGAACATCATCTCTACCTGGTACTCCACTTGAGCATTCAAACCCAGAATCA
GTAAGTGGAGGAAGCATAGGCAGTGCACTGAAATCAGATACAAGAGGAGTCCATCGGCGA
ATATCTCGCTCACTTTCGGTCCCTGTAAACAATAAAGATAGAAGCATAAAGAGAATGGAT
TCATTTTTTCGTGTAATTCCCTCAACTCCCCGGGTGAAGGAATTGGATGCAATGACAATG
AATTCAAGTCCAGCAGTGGAAGCAGAAAACAATGAAGCTGATGGTGAGGATATACCTGAA
GAAGAGGCTGTGTGCAGGATTTGTTTGGTTGAACTGTGTGAAGGTGGTGAGACTCTCAAG
ATGGAGTGCAGCTGCAAAGGTGAACTTGCTCTAGCCCACCAGGAGTGTGCTGTCAAATGG
TTTAGGATCAAGGGTAACAAAAACTGTGATGTATGCAAGCAAGAGGTTCAAAACCTGCCT
GTCACTCTTTTGAGGATCCAGAGCATTCAAACTCGAAATAGTGGATCAAATAGAGCTCAT
CAGACAGAAGTTAATGGATACAGGGTTTGGCATGAACTGCCTGTACTCGTGATTGTCAGT
ATGCTTGCCTACTTTTGTTTTCTCGAGCAGCTTCTGGTTGGAAATATGGGTACTAGTGCA
ATAGCCATTTCTCTTCCCTTTTCTTGTGTACTGGGTCTTCTTGCCTCCATGACTGCCTCA
ACCATGGTGAAGAGAAGATTTATCTGGGTTTATGCATCTATTCAATTTGCATTGGTGGTT
CTCTTCGCGCATATTTTTTATTCCTTGGTTCGTGTACAAGCCGTTCTATCCATTCTCCTC
TCTACATTTGCCGGGTTGGGCATTGCAATGAGTGGGAGTTCTATTATTGTGGAGCTGTTG
AGATGGAGACTCAGATGGCATGCCTGGTCAGAGCAGCAGCAGCAACACGCCACCATACTG
AATCTGAAAACCCAGAGACTTTTAGTAGGAGCTGAATCAATAGCCTGTTGA

Peptide Sequence

PEP ID

VIT_06s0004g02930.t01
PEP Infomation

pep chromosome:12X:6:3652219:3658239:-1 gene:VIT_06s0004g02930 transcript:VIT_06s0004g02930.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRGEEKPVAEGHDVDEGERAVAIPIQEVEDSTGITEETPHFQQWRRQNLFLEIPSREMEA
SSQDSVRIKMPPTPSPTPKKVNFFLTPSPSDTRVTGSPGPSATKGKSSKKSLLPKLSFKN
RSATSDSDKAANLALGGSSTTSREKPSISRSLSLSKIFTPKMNRTSSLPGTPLEHSNPES
VSGGSIGSALKSDTRGVHRRISRSLSVPVNNKDRSIKRMDSFFRVIPSTPRVKELDAMTM
NSSPAVEAENNEADGEDIPEEEAVCRICLVELCEGGETLKMECSCKGELALAHQECAVKW
FRIKGNKNCDVCKQEVQNLPVTLLRIQSIQTRNSGSNRAHQTEVNGYRVWHELPVLVIVS
MLAYFCFLEQLLVGNMGTSAIAISLPFSCVLGLLASMTASTMVKRRFIWVYASIQFALVV
LFAHIFYSLVRVQAVLSILLSTFAGLGIAMSGSSIIVELLRWRLRWHAWSEQQQQHATIL
NLKTQRLLVGAESIAC

Transcript Sequence

Transcript ID

VIT_06s0004g02930.t01
Transcript Infomation

cdna chromosome:12X:6:3652219:3658239:-1 gene:VIT_06s0004g02930 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCATTCGTGTTGTTTGGGCCTTTTGGAAGTTGCTTGGTTGACTGAGCTCTTGCTTCAA
CTAGCGGAATTCTTTGATTTTGGGCGCCTCTGGTCCTTAAGTTTTTTGGGTTTTGGTTGT
TTTGGTATGAGAGAATGAGAGGTGAGGAAAAACCAGTGGCTGAAGGGCATGATGTGGATG
AAGGTGAAAGAGCGGTTGCTATTCCAATTCAGGAGGTTGAAGATTCAACTGGAATAACTG
AAGAAACACCACATTTTCAGCAATGGAGGCGGCAAAACCTCTTCCTAGAGATACCCTCAA
GAGAAATGGAAGCCTCCTCTCAAGATTCTGTTAGAATAAAGATGCCTCCAACACCAAGTC
CGACTCCAAAAAAAGTAAATTTCTTTCTGACACCTAGCCCAAGTGATACAAGAGTAACTG
GGTCTCCAGGTCCTTCTGCTACTAAAGGTAAATCATCCAAAAAAAGCCTCCTACCAAAAT
TGAGCTTTAAGAATCGGAGTGCTACTTCGGATAGCGATAAGGCTGCTAACCTAGCTCTAG
GAGGTTCATCTACAACCTCACGAGAAAAACCCTCAATCTCAAGGTCATTGTCACTTTCAA
AGATATTCACTCCTAAAATGAATAGAACATCATCTCTACCTGGTACTCCACTTGAGCATT
CAAACCCAGAATCAGTAAGTGGAGGAAGCATAGGCAGTGCACTGAAATCAGATACAAGAG
GAGTCCATCGGCGAATATCTCGCTCACTTTCGGTCCCTGTAAACAATAAAGATAGAAGCA
TAAAGAGAATGGATTCATTTTTTCGTGTAATTCCCTCAACTCCCCGGGTGAAGGAATTGG
ATGCAATGACAATGAATTCAAGTCCAGCAGTGGAAGCAGAAAACAATGAAGCTGATGGTG
AGGATATACCTGAAGAAGAGGCTGTGTGCAGGATTTGTTTGGTTGAACTGTGTGAAGGTG
GTGAGACTCTCAAGATGGAGTGCAGCTGCAAAGGTGAACTTGCTCTAGCCCACCAGGAGT
GTGCTGTCAAATGGTTTAGGATCAAGGGTAACAAAAACTGTGATGTATGCAAGCAAGAGG
TTCAAAACCTGCCTGTCACTCTTTTGAGGATCCAGAGCATTCAAACTCGAAATAGTGGAT
CAAATAGAGCTCATCAGACAGAAGTTAATGGATACAGGGTTTGGCATGAACTGCCTGTAC
TCGTGATTGTCAGTATGCTTGCCTACTTTTGTTTTCTCGAGCAGCTTCTGGTTGGAAATA
TGGGTACTAGTGCAATAGCCATTTCTCTTCCCTTTTCTTGTGTACTGGGTCTTCTTGCCT
CCATGACTGCCTCAACCATGGTGAAGAGAAGATTTATCTGGGTTTATGCATCTATTCAAT
TTGCATTGGTGGTTCTCTTCGCGCATATTTTTTATTCCTTGGTTCGTGTACAAGCCGTTC
TATCCATTCTCCTCTCTACATTTGCCGGGTTGGGCATTGCAATGAGTGGGAGTTCTATTA
TTGTGGAGCTGTTGAGATGGAGACTCAGATGGCATGCCTGGTCAGAGCAGCAGCAGCAAC
ACGCCACCATACTGAATCTGAAAACCCAGAGACTTTTAGTAGGAGCTGAATCAATAGCCT
GTTGATGTTTTTTACCGCTTTTTTTTTCAACTTTCTATCTACCTCCTAAGTAGAAACTCT
TGATGTTTTTGCTATGTAGTAGTATTTCAAAGTTGAAGCTTTTTTACTTTCACACAAAGA
AAAAGAAAAAAACAGATGATATATATATATATACATCATATTTTGAGTAATTAACTTAGA
TTGTCTTGAACAGGCTTGAGAATAATGACAGAAGGAATTTTAAGTGTATTTCTTTGCTCT
GCTGATTTTAGATGCTCTGAATG