Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g02810.t01
CDS Infomation

cds chromosome:12X:6:3524238:3528798:-1 gene:VIT_06s0004g02810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTACAAAAACCAGCTTCAGGAGCTGGCGCAGAGGAGCTGTTTCAATCTGCCGTCATAC
ACGTGCATCAGAGAAGGTCCTGATCACGCGCCTAGGTTCAAGGCCACCGTTAACTTTAAC
GGCGAGATCTTCGAGAGCCCTAACTACTGCACCACTCTGCGGCAAGCCGAGCACTCCGCC
GCTGAAGTCGCCCTGAACTCGCTTTCTAACCGCGGTCCCTCGCACTCGCTCGCCGCCAGG
ATTCTGGATGAGACGGGAGTGTACAAGAACCTTTTACAGGAGATTGCACAAAGAGTAGGA
GCACCATTGCCTCAATACACAACTTTCAGGTCAGGCCTTGGGCACCTACCTGTTTTTACA
GGTACAGTAGAATTGGCTGGAATCACATTCACAGGGGAACCTGCAAAGAATAAGAAACAG
GCAGAGAAGAATGCTGCAATGGCAGCTTGGTCATCTCTAAAACAATTGGCAAAAGAGGCT
GCAAATTCATCATCTGAGACAGAGAACAATGATGAGCTGGAGCAGATCACAATAGCACGA
GCACTATTGAATTATCGGCTGAAGGAAAAGATGGCAATAGCAAACTCCCCTAGTGGCACG
TTGTCTTTCCCAAAGAAATTTCCAATTCAGAATTCAAGATTGTTTAGTCCTCAGCTGCCT
CCTGTTGCCACATCAAAAATTCTCCCTTTAATCTGCCAAAAGACACCTCCTCGAAACAGA
CCTCCATCACCAACTGCAAATGATGGTTCTATGCCATCATCACAGCCACGAAGCAGACCC
ACGTCAACAACATCAAGTGAGAACCCAGTGCCACCATCACAGCCTCTAGCACTGGACGTT
CGTGCAGTCCGCCCCCAGAGATTCCCTGCAGCAGGGGCAGTTCCTTATGTTCCTATCCGG
CAGTTTAGGACACCTTATCATGGGATTGCACCACCAGTGACAATAAGGAATGCTGTTCCT
GTTTTCTCTGCACCACCTTCTGGGCTACCCCCTCAGGTGATTCGGGCTCCACACATGCGA
ATTGCCCCACCAGTTTGTGTTAGGCAAGCTGTTCCAGTTTTTGCTGCTCCACCAGTACGA
AAAGAAGATCCTCTAGTTGTTCGAAAAGAAGATCCATCAGCTGCTTCATTGCCTTCCCTG
CCAACTAAATCACCAGCTCATGTAGAGGAAACTGGAAGTGCAACTGCCAATGACCTGCAA
GAATTTGAAGCAGTAAAGAGCTTGGAACAACTAAAGATATGA

Peptide Sequence

PEP ID

VIT_06s0004g02810.t01
PEP Infomation

pep chromosome:12X:6:3524238:3528798:-1 gene:VIT_06s0004g02810 transcript:VIT_06s0004g02810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA
AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAANSSSETENNDELEQITIAR
ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNR
PPSPTANDGSMPSSQPRSRPTSTTSSENPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIR
QFRTPYHGIAPPVTIRNAVPVFSAPPSGLPPQVIRAPHMRIAPPVCVRQAVPVFAAPPVR
KEDPLVVRKEDPSAASLPSLPTKSPAHVEETGSATANDLQEFEAVKSLEQLKI

Transcript Sequence

Transcript ID

VIT_06s0004g02810.t01
Transcript Infomation

cdna chromosome:12X:6:3524238:3528798:-1 gene:VIT_06s0004g02810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCCTCTCTTTCTCTCTCTACAGAAAAACCCTAAAACCTCGATCTTGCCGGACTTCATTTC
CGGTGAACACTGGTGTACGAGTCAGCGCCTTTTTCTCTCATTCCGAACGGGGAACTACGA
CTTGGATCTGGCTCCGGGAGGCATTTCCTGGGTGAGAAAATCGGTTTCTAGGGCGAGAAA
GCGGAGGGATTGGAGTAGAGAAGCGCGAGACTGAGGGAGAGAAATCGGAGCGAGATGTAC
AAAAACCAGCTTCAGGAGCTGGCGCAGAGGAGCTGTTTCAATCTGCCGTCATACACGTGC
ATCAGAGAAGGTCCTGATCACGCGCCTAGGTTCAAGGCCACCGTTAACTTTAACGGCGAG
ATCTTCGAGAGCCCTAACTACTGCACCACTCTGCGGCAAGCCGAGCACTCCGCCGCTGAA
GTCGCCCTGAACTCGCTTTCTAACCGCGGTCCCTCGCACTCGCTCGCCGCCAGGATTCTG
GATGAGACGGGAGTGTACAAGAACCTTTTACAGGAGATTGCACAAAGAGTAGGAGCACCA
TTGCCTCAATACACAACTTTCAGGTCAGGCCTTGGGCACCTACCTGTTTTTACAGGTACA
GTAGAATTGGCTGGAATCACATTCACAGGGGAACCTGCAAAGAATAAGAAACAGGCAGAG
AAGAATGCTGCAATGGCAGCTTGGTCATCTCTAAAACAATTGGCAAAAGAGGCTGCAAAT
TCATCATCTGAGACAGAGAACAATGATGAGCTGGAGCAGATCACAATAGCACGAGCACTA
TTGAATTATCGGCTGAAGGAAAAGATGGCAATAGCAAACTCCCCTAGTGGCACGTTGTCT
TTCCCAAAGAAATTTCCAATTCAGAATTCAAGATTGTTTAGTCCTCAGCTGCCTCCTGTT
GCCACATCAAAAATTCTCCCTTTAATCTGCCAAAAGACACCTCCTCGAAACAGACCTCCA
TCACCAACTGCAAATGATGGTTCTATGCCATCATCACAGCCACGAAGCAGACCCACGTCA
ACAACATCAAGTGAGAACCCAGTGCCACCATCACAGCCTCTAGCACTGGACGTTCGTGCA
GTCCGCCCCCAGAGATTCCCTGCAGCAGGGGCAGTTCCTTATGTTCCTATCCGGCAGTTT
AGGACACCTTATCATGGGATTGCACCACCAGTGACAATAAGGAATGCTGTTCCTGTTTTC
TCTGCACCACCTTCTGGGCTACCCCCTCAGGTGATTCGGGCTCCACACATGCGAATTGCC
CCACCAGTTTGTGTTAGGCAAGCTGTTCCAGTTTTTGCTGCTCCACCAGTACGAAAAGAA
GATCCTCTAGTTGTTCGAAAAGAAGATCCATCAGCTGCTTCATTGCCTTCCCTGCCAACT
AAATCACCAGCTCATGTAGAGGAAACTGGAAGTGCAACTGCCAATGACCTGCAAGAATTT
GAAGCAGTAAAGAGCTTGGAACAACTAAAGATATGATGGCGGTTGGGTTGGGTAGGACTT
AAATCGACAAGGAATTATATTATGGTCTTGTGTTGGTTTTCAGGTTTTTTGCCTTCCTTT
TTTCATCTTATTATATGAGTGCGCTTCAACCCCCTCTTTATTTGCCAGTTCTTTGTTTTG
TTAAAGCTACGTTGTTTGCAGGTTAAATTAGCATCGGCAATCTTTAATCGTTGCAATTCA
AGAGCAGCTGCACCGCAAATGCTCTATAGCTTATTGTGATTTATACTTTTATCATGTATG
CATGCTGGTCATATCATTTTATAGTAGAGCCGATTTAGTATCCATACAGTGTTTGTTCAC
ACCTGGGGTTCCTTCCATGCTGTAACG