Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g02530.t01
CDS Infomation

cds chromosome:12X:6:3046014:3048230:-1 gene:VIT_06s0004g02530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGACCGATGTGGTCCAATCCAGTGGGAAGCAGCGAACAAGTACCACAAAATCGAGG
TCATCCACGGCAACGTCTTCAACCTCAGAGACCTCAACAAAGCAGGGAACGCCGCGAATT
CAACAAATCACAAGACCAAGGCCATCAACAGGAACAGCTTCAACATCAGAGGCCTCCACA
AGCAACGTGAGCAGTGTTCCTTACGCCACAGGCTCGAGCTACATAGGCTCATCAGCAACA
TCGATTTCCAGCCGTACTTCATTGTCCAGCCTCCGCGACTCGTTGCCGGAGAACCCTCAC
ATTTACGATTTCTCTGAGATAAGCTCCGCCACCAATAATTTCCTTGCCAAACGGTACTCA
CCGTCGTCTTCTTCCACCGCGTGCTGGCGGTGCACGCTCCGCGGCAAGGATGTGATAGTG
TTCCAGCGCAAGTTCTGGCGGAGGCTGGAGATGGCGCAACTCAAACAACGATTGTCTGTG
ATCTGTAGAAGTCATCACAAGAGCATAACCAGGCTTCTCGGAGCGTCGATTTCTGGTGAA
CACTTATACCTAGTTTATGACTTTGTTAAGGGAGCAAACCTAGCGAATATCCTGAGAAAC
CAGAGGAACCCTGACTTCACTGTGTTGTCGACTTGGATTTCGAGAATGCAGATCGCCGCG
GATCTCGCTGATGGTCTCGATTACATCCACAACAATACTGGATTGAGCATAAGCTTTGTG
CATAACCGTATAAAAAGTAACAGCATTGTCATTACGGAGCCTATAAAGAGTAACCGTACA
TCCATTGCGGAGACTTTGCACAACGCCAAGATATGCCATTTTGGAACGGCCCAATTGTGC
GGCGAAACCGACGAGAATCAGCTGCAGCCCCAGGTTTCTAAATATGAAGGCGAAATCGTG
GAAGAAGAGTCCTTTTCGTCAACGAAATCTCCGGAGTTGAAGCGAACGAATAGCAGAGCG
ATGCAATTCGAAGGTGTCAGAGGATACATGTCGCCGGAATTCCAATCCACCGGAGTGGCG
ACGCAGCAATCAGATGTGTACGCGTTCGGAGTTGTGATCCTGGAACTCTTGTCTGGCGAA
GAGCCATTGAAATACAAGTTCGATAAAACGACCGGCGAATTCAGACGAACGTCGGTGATC
GACACTGCAAGAGCAGCAATCGACGATACCGATGGTAAAGATGGGAGATTGAGGAGGTGG
GTGGACAAGAGGCTGAAGGACTCCTTTCCGGTTGAGGTTGCGGAGAAGGTGACACGTTTA
GCACTGGACTGCGTACACGTGGACCCTGATCAACGGCCCGACATGAGCCACGTTTCTGGA
AAGATTTCCAAGCTTCTCATACAGTCAAAGAATTGGTTGGATAAGTTGAAGGTTCCTACT
GATATCTCGGTCTCGTTGGCTCCTCGTTGA

Peptide Sequence

PEP ID

VIT_06s0004g02530.t01
PEP Infomation

pep chromosome:12X:6:3046014:3048230:-1 gene:VIT_06s0004g02530 transcript:VIT_06s0004g02530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATDVVQSSGKQRTSTTKSRSSTATSSTSETSTKQGTPRIQQITRPRPSTGTASTSEAST
SNVSSVPYATGSSYIGSSATSISSRTSLSSLRDSLPENPHIYDFSEISSATNNFLAKRYS
PSSSSTACWRCTLRGKDVIVFQRKFWRRLEMAQLKQRLSVICRSHHKSITRLLGASISGE
HLYLVYDFVKGANLANILRNQRNPDFTVLSTWISRMQIAADLADGLDYIHNNTGLSISFV
HNRIKSNSIVITEPIKSNRTSIAETLHNAKICHFGTAQLCGETDENQLQPQVSKYEGEIV
EEESFSSTKSPELKRTNSRAMQFEGVRGYMSPEFQSTGVATQQSDVYAFGVVILELLSGE
EPLKYKFDKTTGEFRRTSVIDTARAAIDDTDGKDGRLRRWVDKRLKDSFPVEVAEKVTRL
ALDCVHVDPDQRPDMSHVSGKISKLLIQSKNWLDKLKVPTDISVSLAPR

Transcript Sequence

Transcript ID

VIT_06s0004g02530.t01
Transcript Infomation

cdna chromosome:12X:6:3046014:3048230:-1 gene:VIT_06s0004g02530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCTGGCATCATGAATACTATGGATAATTGAGTCATTTAAACGCTTCTGCTTATTTAAAGG
CTGAGTTGGCCCTAAGAAAAATATAACTAAAGATTTGAGAATTTAGACCTAGTAAAATAA
ATTTCACTCGTGTGGGCATTTTTTAATTATTCATTTCTTAATAATTTGGCTGAGATTCAT
AGCCCAGACTAAAAGCTAGAAGAAGCAAAGTTGCACAAGACTAAGATCCATTGGTCAGCA
GGTGATAAAAAGTGAACGAACGGAAAGATCAAACAGACCCTGCACTTTTTGCAAAATGAC
AATAAAAAAAAATTATATCAGACATACCTCGCTGCGCCCCGCTGGCGATCAATTCGACGG
GGACCACCCTCAGCTTCTGCTTTTCCCTCTGCGATCTGCCTCTACTCCAGCTGTTCCGGC
CAAATTAAGCGCCGACGTTCAATCTCTTTTATCCGTAGCCAGCTTCTAATACATGCGCTC
ATTAGTAGGTCCCGGTTCATACTGGGCCGCCCGACTTTTCTGCCCTTTTTCTGTCACACC
CCCAAATTTTGAATTCTCATCCGATTCTTAAAGCCATAACCCTAACCCTAATCTTTACTT
TTTCCAAGATTATTCTGGTTCTGATCTCCAAATCTTTTCATGTGTAGATCCAAAATGGCG
ACCGATGTGGTCCAATCCAGTGGGAAGCAGCGAACAAGTACCACAAAATCGAGGTCATCC
ACGGCAACGTCTTCAACCTCAGAGACCTCAACAAAGCAGGGAACGCCGCGAATTCAACAA
ATCACAAGACCAAGGCCATCAACAGGAACAGCTTCAACATCAGAGGCCTCCACAAGCAAC
GTGAGCAGTGTTCCTTACGCCACAGGCTCGAGCTACATAGGCTCATCAGCAACATCGATT
TCCAGCCGTACTTCATTGTCCAGCCTCCGCGACTCGTTGCCGGAGAACCCTCACATTTAC
GATTTCTCTGAGATAAGCTCCGCCACCAATAATTTCCTTGCCAAACGGTACTCACCGTCG
TCTTCTTCCACCGCGTGCTGGCGGTGCACGCTCCGCGGCAAGGATGTGATAGTGTTCCAG
CGCAAGTTCTGGCGGAGGCTGGAGATGGCGCAACTCAAACAACGATTGTCTGTGATCTGT
AGAAGTCATCACAAGAGCATAACCAGGCTTCTCGGAGCGTCGATTTCTGGTGAACACTTA
TACCTAGTTTATGACTTTGTTAAGGGAGCAAACCTAGCGAATATCCTGAGAAACCAGAGG
AACCCTGACTTCACTGTGTTGTCGACTTGGATTTCGAGAATGCAGATCGCCGCGGATCTC
GCTGATGGTCTCGATTACATCCACAACAATACTGGATTGAGCATAAGCTTTGTGCATAAC
CGTATAAAAAGTAACAGCATTGTCATTACGGAGCCTATAAAGAGTAACCGTACATCCATT
GCGGAGACTTTGCACAACGCCAAGATATGCCATTTTGGAACGGCCCAATTGTGCGGCGAA
ACCGACGAGAATCAGCTGCAGCCCCAGGTTTCTAAATATGAAGGCGAAATCGTGGAAGAA
GAGTCCTTTTCGTCAACGAAATCTCCGGAGTTGAAGCGAACGAATAGCAGAGCGATGCAA
TTCGAAGGTGTCAGAGGATACATGTCGCCGGAATTCCAATCCACCGGAGTGGCGACGCAG
CAATCAGATGTGTACGCGTTCGGAGTTGTGATCCTGGAACTCTTGTCTGGCGAAGAGCCA
TTGAAATACAAGTTCGATAAAACGACCGGCGAATTCAGACGAACGTCGGTGATCGACACT
GCAAGAGCAGCAATCGACGATACCGATGGTAAAGATGGGAGATTGAGGAGGTGGGTGGAC
AAGAGGCTGAAGGACTCCTTTCCGGTTGAGGTTGCGGAGAAGGTGACACGTTTAGCACTG
GACTGCGTACACGTGGACCCTGATCAACGGCCCGACATGAGCCACGTTTCTGGAAAGATT
TCCAAGCTTCTCATACAGTCAAAGAATTGGTTGGATAAGTTGAAGGTTCCTACTGATATC
TCGGTCTCGTTGGCTCCTCGTTGAGTTTCCCCCTTTTTTATTTTAAATCCTTTCATCAAT
TGTTGGGCGGCGTCGTTTTGATTGTGACGCAACTGGTGGGCATTATATATGTTGCGGCCA
ATTTTCAACCCTTTTTTGGGGTTTAATTATGATTTCGAGATTTCAATAAATGGTGCC