Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g02480.t01
CDS Infomation

cds chromosome:12X:6:2948720:2966985:-1 gene:VIT_06s0004g02480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTACATATGAGCAAGATCCTGATGTTGTTCGGTGGGGTCTCCAGCTTTTTGATGGT
GATCCGTTTTCTAATTGCGGGTATGGTGGCACCATTGTACAAAATGATGTAAGTTATTAT
GATGGACCATATTTCAAGGAAGATCATTATGATAATGAATGTAGCAATGTGGAGAATGAT
GAGATTATTGCACATGCTCTTCAAGAAGAACTATCACAACTTGCTGTTGACGAAGCAGCT
GGACTTTCACATGAAGTGGTAGAGGATTTGCAAGTTTCTATTTTTCCAGAAGAATGGCCT
GATCAATCTATGGGAAATTATGGATTTGGGCATGAGAGCGGCCAGGAAGATACAGATGAT
ATGGGACTTTCTAGTTCATGTTCTAGTCCTGACGAAAAGTCATACAATGGGGAGGATTGG
TCATATTCTCTAGATCTGACAGATGAATATGCACTCGATGATGAAGTAGGCAAAATATTG
AATCAGATGGTTCCTGTTCCTCATGTTCCCAAAATCAATGGAGAAATACCCTCTCTTGAT
GAAGCAACTCTAGATCATCAGAGGCTGTTGGACCGATTGCAGTTATTTGATTTGGTGGAG
CTTAAAGTTCAAGGAGATGGTAACTGTCAGTTTCGTTCTCTGTCAGATCAAGTTTATTGT
ACTCCTGAGCACCACCAATTTATTAGACAACAAGTTGTAAATCAGCTTAAGTCTTACCCA
GAGATATATGAAGGATATGTTCCCATGGCTTATGGTGACTATTTGGAGAAGATGTCCAAG
ACTGGAGAATGGGGTGATCACGTCACTTTGCAGGCTGCCGCAGATTTGTATGGTGTTAAA
ATATTTGTCATAACATCTTTCAAGGATACATGCTACATTGAGATTCTTCCAAATGTTCAA
AGGTCAGAGCGAGTAATGCTTTTGAGCTTTTGGGCAGAGGTTCACTACAACTCAATATAT
TTTAAAGGAGATGTGCCTGAATTTGAGACTAAGAAGAAGAAGAGATGGTGGAGTTTTCGA
AATAAGCAATTTGAGTCACAGGATGAATGCACGACTGAATGGTAA

Peptide Sequence

PEP ID

VIT_06s0004g02480.t01
PEP Infomation

pep chromosome:12X:6:2948720:2966985:-1 gene:VIT_06s0004g02480 transcript:VIT_06s0004g02480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MITYEQDPDVVRWGLQLFDGDPFSNCGYGGTIVQNDVSYYDGPYFKEDHYDNECSNVEND
EIIAHALQEELSQLAVDEAAGLSHEVVEDLQVSIFPEEWPDQSMGNYGFGHESGQEDTDD
MGLSSSCSSPDEKSYNGEDWSYSLDLTDEYALDDEVGKILNQMVPVPHVPKINGEIPSLD
EATLDHQRLLDRLQLFDLVELKVQGDGNCQFRSLSDQVYCTPEHHQFIRQQVVNQLKSYP
EIYEGYVPMAYGDYLEKMSKTGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILPNVQ
RSERVMLLSFWAEVHYNSIYFKGDVPEFETKKKKRWWSFRNKQFESQDECTTEW

Transcript Sequence

Transcript ID

VIT_06s0004g02480.t01
Transcript Infomation

cdna chromosome:12X:6:2948720:2966985:-1 gene:VIT_06s0004g02480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGACATAGAAATTGCAAATGATTACATATGAGCAAGATCCTGATGTTGTTCGGTGGGG
TCTCCAGCTTTTTGATGGTGATCCGTTTTCTAATTGCGGGTATGGTGGCACCATTGTACA
AAATGATGTAAGTTATTATGATGGACCATATTTCAAGGAAGATCATTATGATAATGAATG
TAGCAATGTGGAGAATGATGAGATTATTGCACATGCTCTTCAAGAAGAACTATCACAACT
TGCTGTTGACGAAGCAGCTGGACTTTCACATGAAGTGGTAGAGGATTTGCAAGTTTCTAT
TTTTCCAGAAGAATGGCCTGATCAATCTATGGGAAATTATGGATTTGGGCATGAGAGCGG
CCAGGAAGATACAGATGATATGGGACTTTCTAGTTCATGTTCTAGTCCTGACGAAAAGTC
ATACAATGGGGAGGATTGGTCATATTCTCTAGATCTGACAGATGAATATGCACTCGATGA
TGAAGTAGGCAAAATATTGAATCAGATGGTTCCTGTTCCTCATGTTCCCAAAATCAATGG
AGAAATACCCTCTCTTGATGAAGCAACTCTAGATCATCAGAGGCTGTTGGACCGATTGCA
GTTATTTGATTTGGTGGAGCTTAAAGTTCAAGGAGATGGTAACTGTCAGTTTCGTTCTCT
GTCAGATCAAGTTTATTGTACTCCTGAGCACCACCAATTTATTAGACAACAAGTTGTAAA
TCAGCTTAAGTCTTACCCAGAGATATATGAAGGATATGTTCCCATGGCTTATGGTGACTA
TTTGGAGAAGATGTCCAAGACTGGAGAATGGGGTGATCACGTCACTTTGCAGGCTGCCGC
AGATTTGTATGGTGTTAAAATATTTGTCATAACATCTTTCAAGGATACATGCTACATTGA
GATTCTTCCAAATGTTCAAAGGTCAGAGCGAGTAATGCTTTTGAGCTTTTGGGCAGAGGT
TCACTACAACTCAATATATTTTAAAGGAGATGTGCCTGAATTTGAGACTAAGAAGAAGAA
GAGATGGTGGAGTTTTCGAAATAAGCAATTTGAGTCACAGGATGAATGCACGACTGAATG
GTAAAGTGGGATTTTAGGGGCATACCATACCAAGGGCACAAATTTCTCCTGCCACTGCAC
TTTGGGATGGCTTGAGCATTTCCTCACCCGAAATATCTCTCATCTGCATTCTTTGTTCAA
TAATAATCCTTTTTTTTTGGGAATATTAAGAACTTTGCTGGCAGCATTGATATGGTGCTG
GTATTCTAGATTCCCATCTGCTTGACTTTCGCATTTTCAGAATGTTTTGTTATTATGTAC
CATTTTTCTTAGCATTGTACATGCCATTTACAAACCCATGTTCATGGATGAAATTTGGTG
GGTGTTTTTTATCCCTCTCTTTCTGGAAGAATGCAAGTGCAACTGTGCAATTAATATAA