Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g02410.t01
CDS Infomation

cds chromosome:12X:6:2863554:2891273:-1 gene:VIT_06s0004g02410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCCTTCCAAGCTCAATCCCAATGGAGATGCCAGTGTATCATGTTCACAGCCAGAG
AATGGTTTAATTGATCTCTTCAATTCTGAGAAGGCAGTTCAGGAGCTTCTTCAACAACCT
CCTGTTCAAGGAATTGATGATCATCTTATAGAGTTCTCGGAGGCTCTGAGAACTGTTGCT
AAGGCATTAAGACGAGTGTCTGAAGGAAAGGCTTCTGCTCAAGCTGAGGCAGCTGAATGG
AAGCGTAAATATGAATTAGAGAGGGCACGGAATCTGCAATTGGAGCGTAAAGAGCTGTCA
TCTGGAGAGCATAATGGTGATTGTAGTGCAGAGAACTTGACCAACCAACCAATGATGTGC
AATGAAGCTAGGAAGCAATCTGAAAGGTGTTGTGGGATGCATGGAATTTTTTCCCATGAG
GTCCTTCATAATGGGGAAATTGATTCTGACACTGAGATGGTTAACAATAAGTTTATGAGA
AAGGCATCATTTAAACTTTCATGGTGGTGCAAAGGAGAGAAAAGTGATCAGCACAAGCAG
GATATTGTCTCGTTTGAAAGAGGAAACATAACAACTGCAGAGCGCAGCAGTAAGCAGATT
TCTTTGAAGTGGGAATCTCACCCACAGACTGTGCTCATTTTGACCAAACCAAATTCAACT
TCTGTTCGAATTCTATGTGTGGATATGGTCAGATGGCTTAGAGAACAGAAAAAGATGGAA
ATTTTTGTGGAACCACGTGTTAAAGTTGAACTTATGACAGAGTCACCTAACTTCGACTTT
GTACAAACTTGGAAAGATGACAAGGAAACTTTGCTCCTGCACACAAATGTTGACCTTGTT
GTAACTCTCGGTGGGGATGGAACTGTCCTTTGGGCTGCATCCTTGTTCAAAGGGCCAGTT
CCTCCTGTAGTCCCTTTTTCTTTGGGCTCTCTGGGTTTTATGACTCCATTTCATTCTGAA
CAGTACAGAGAATGCCTTGATTCGATCCTAAGGGGTCCTTTTAGTATCACATTACGACAC
CGGTTGCAGTGCCATGTTATTCGAGATGCAGCTAAAAGTGAATATGAGAGCGAAGGACCT
ATTCTTGTTTTAAATGAGGTTACAATTGATCGTGGAATATCATCATTCCTGACAAATTTG
GAATGCTATAGTGACGGCTCATTTGTCACATGTGTGCAAGGAGATGGATTGATCTTGTCA
ACAACATCTGGAAGTACTGCATATTCCTTGGCAGCTGGAGGATCAATGGTCCATCCCCAG
GTTCCTGGCATCCTGTTTACACCAATCTGCCCACACTCCTTATCCTTCAGGCCTCTGATA
TTACCTGAGCATGTGACGCTCCGTGTACAAGTGCCTTTCAATAGCAGAGGCCATGCATGG
GCATCATTTGATGGCAAGGACAGAAGACAGTTAGCACCTGGAGATGCACTCGTTGTCAGC
ATGGCCCCTTGCCCTGTACCAACAGCATGCCAAGTTGATTCTACCAGCGACTTCCTGCGC
AGCATCCATGATGGCCTTCACTGGAACTTGAGGAAAACCCAGTCCTTCGAGGGCCCTCGG
GACCTATAA

Peptide Sequence

PEP ID

VIT_06s0004g02410.t01
PEP Infomation

pep chromosome:12X:6:2863554:2891273:-1 gene:VIT_06s0004g02410 transcript:VIT_06s0004g02410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPSKLNPNGDASVSCSQPENGLIDLFNSEKAVQELLQQPPVQGIDDHLIEFSEALRTVA
KALRRVSEGKASAQAEAAEWKRKYELERARNLQLERKELSSGEHNGDCSAENLTNQPMMC
NEARKQSERCCGMHGIFSHEVLHNGEIDSDTEMVNNKFMRKASFKLSWWCKGEKSDQHKQ
DIVSFERGNITTAERSSKQISLKWESHPQTVLILTKPNSTSVRILCVDMVRWLREQKKME
IFVEPRVKVELMTESPNFDFVQTWKDDKETLLLHTNVDLVVTLGGDGTVLWAASLFKGPV
PPVVPFSLGSLGFMTPFHSEQYRECLDSILRGPFSITLRHRLQCHVIRDAAKSEYESEGP
ILVLNEVTIDRGISSFLTNLECYSDGSFVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQ
VPGILFTPICPHSLSFRPLILPEHVTLRVQVPFNSRGHAWASFDGKDRRQLAPGDALVVS
MAPCPVPTACQVDSTSDFLRSIHDGLHWNLRKTQSFEGPRDL

Transcript Sequence

Transcript ID

VIT_06s0004g02410.t01
Transcript Infomation

cdna chromosome:12X:6:2863554:2891273:-1 gene:VIT_06s0004g02410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGACAGTTGTGAGGGTTTCAGGTGGAGATCTCTCTTTCTGTCTCCCATTCTCAAGCTCTG
TCTCGATAATCCATGGCTCCTTCCAAGCTCAATCCCAATGGAGATGCCAGTGTATCATGT
TCACAGCCAGAGAATGGTTTAATTGATCTCTTCAATTCTGAGAAGGCAGTTCAGGAGCTT
CTTCAACAACCTCCTGTTCAAGGAATTGATGATCATCTTATAGAGTTCTCGGAGGCTCTG
AGAACTGTTGCTAAGGCATTAAGACGAGTGTCTGAAGGAAAGGCTTCTGCTCAAGCTGAG
GCAGCTGAATGGAAGCGTAAATATGAATTAGAGAGGGCACGGAATCTGCAATTGGAGCGT
AAAGAGCTGTCATCTGGAGAGCATAATGGTGATTGTAGTGCAGAGAACTTGACCAACCAA
CCAATGATGTGCAATGAAGCTAGGAAGCAATCTGAAAGGTGTTGTGGGATGCATGGAATT
TTTTCCCATGAGGTCCTTCATAATGGGGAAATTGATTCTGACACTGAGATGGTTAACAAT
AAGTTTATGAGAAAGGCATCATTTAAACTTTCATGGTGGTGCAAAGGAGAGAAAAGTGAT
CAGCACAAGCAGGATATTGTCTCGTTTGAAAGAGGAAACATAACAACTGCAGAGCGCAGC
AGTAAGCAGATTTCTTTGAAGTGGGAATCTCACCCACAGACTGTGCTCATTTTGACCAAA
CCAAATTCAACTTCTGTTCGAATTCTATGTGTGGATATGGTCAGATGGCTTAGAGAACAG
AAAAAGATGGAAATTTTTGTGGAACCACGTGTTAAAGTTGAACTTATGACAGAGTCACCT
AACTTCGACTTTGTACAAACTTGGAAAGATGACAAGGAAACTTTGCTCCTGCACACAAAT
GTTGACCTTGTTGTAACTCTCGGTGGGGATGGAACTGTCCTTTGGGCTGCATCCTTGTTC
AAAGGGCCAGTTCCTCCTGTAGTCCCTTTTTCTTTGGGCTCTCTGGGTTTTATGACTCCA
TTTCATTCTGAACAGTACAGAGAATGCCTTGATTCGATCCTAAGGGGTCCTTTTAGTATC
ACATTACGACACCGGTTGCAGTGCCATGTTATTCGAGATGCAGCTAAAAGTGAATATGAG
AGCGAAGGACCTATTCTTGTTTTAAATGAGGTTACAATTGATCGTGGAATATCATCATTC
CTGACAAATTTGGAATGCTATAGTGACGGCTCATTTGTCACATGTGTGCAAGGAGATGGA
TTGATCTTGTCAACAACATCTGGAAGTACTGCATATTCCTTGGCAGCTGGAGGATCAATG
GTCCATCCCCAGGTTCCTGGCATCCTGTTTACACCAATCTGCCCACACTCCTTATCCTTC
AGGCCTCTGATATTACCTGAGCATGTGACGCTCCGTGTACAAGTGCCTTTCAATAGCAGA
GGCCATGCATGGGCATCATTTGATGGCAAGGACAGAAGACAGTTAGCACCTGGAGATGCA
CTCGTTGTCAGCATGGCCCCTTGCCCTGTACCAACAGCATGCCAAGTTGATTCTACCAGC
GACTTCCTGCGCAGCATCCATGATGGCCTTCACTGGAACTTGAGGAAAACCCAGTCCTTC
GAGGGCCCTCGGGACCTATAACTTCTCTCTTTTCCAGAAGAAAGTTAAAAGCAATTCTCT
CTAGAATCTAATCCCATACTGACTCAGCTCCTCAGTATCACCTTATCAGGGAGGGAGAGA
GGGGGAACCACTAAATTGGTAATAAGTTCATTTTTCTTACTATTATTATTATTATTTATT
TTTTTCTTTTTCGTTAGTGAAGTATAGCTGTTCTTGTATATTTATGTAGTCATTGTGGGC
AGGATGAAGGACATTATTAGTATTTAGATTGTGTTTATATGTAATTGAGATGAATAGTCA
GTGCTTTATGTGCTGGAACTGTGTTGTAGCAGACAACCCCAAAAAGGGCAGGTACAAGAA
AATTATGTCATTTCTTTT