Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g02390.t01
CDS Infomation

cds chromosome:12X:6:2836439:2838151:1 gene:VIT_06s0004g02390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCCCTACTTCAAACTCTCAATAACCCAACGTACACCTCCCCCTCGGCTTCTCTA
TCAGTCTTCCGAAGATGGAACCGCAACTCCATCAGAGTTCTCACAATTCCAAACAAACCC
TTTTCCCCAAAGCCTACAACACTGATCAAATGCTCTTCGGTTTCAAGCCTAACCCCCAGG
CTGGATCATGAACCAGCGCGAGAACTCAAACAAGAGGACAAGCCACTTCGAGATGTTTGG
GAGGAAATTCAAGGGTGTAACAACTGGGAAGGCCTATTAGACCCCATGAACCCTAATCTC
CGGAAAGAGATCATCCGATATGGCGAATTTGCGCAGGCCTGCTACGACTCCTTCGACTTC
GATCCTCACTCAAAATACTGCGGAACCTGCAAGTACCAAGGTGCCCATTTCTTCCAAAAA
TTGGACATGGCTGATAGAGGGTACCAAATCAGCAGATATCTCTACGCAACCTCCAACATC
AACCTCCCAAACTTCTTCCAGAAATCAAAGATGAGCAGTGTGTGGAGCCCCCACGCAAAC
TGGATGGGCTACATCGCAGTTACAACAGATGAAAAAGAGATCAAAAGATTAGGCCGGCGT
GACATAATAATCGCATGGAGGGGCACCGTCACATACCTCGAATGGATACACGACCTTAAG
GACATCCTCTGTCCGGCCCATTTCAGAGACGATCCCAACATCAAAATCGAGTCCGGGTTC
TACGATTTGTACACCAAGAAAGAGAACAACTGCAAATTCTGCTCATTCTCGGCTAGAGAA
CAAGTGCTCGCTGAAATCAAGAGGCTGGTCGAGAGGTACAAGGACGAAGAAATCAGCATA
ACGATCACTGGGCACAGCCTTGGCGCAGCCTTGGCTTTGTTGAGCGCTTATGACATAGCT
GAAATGAACCTGAACGTAAGGAACAAATCAAGGATCCCAATTTCAGTCTTTTCCTTTTCA
GGACCTCGAGTGGGCAATCTCAAGTTCAAGGAGAGGTGTGATGAGCTGGGAGTGAAGGTC
CTGAGAGTGATAAATGTCCATGATAAAGTCCCCACAGTGCCTGGAATCATCACAAACGAG
AAGTTCCAATACCAAAAGTACATAGAGGAGACGATCTCCTTTCCCTGGAGCTATGCTCAT
GTAGGTGTGGAACTGGCATTAGACCACACCCACTCTCCATTTCTGAAGCCCACAAATGAC
CTTGGTTGTGCGCATAACCTTGAAGCCCATCTGCATTTGGTCGACGGCTACCACGGGAAA
GACCGGAAATTCAGCCTGGCGACGAAGCGGGATATCGCACTGGTGAACAAGAGCTGTGAC
TTCCTGAGGAGCGAGTACGGAGTGCCGGGAAATTGGCGTCAAGATGAGAATAAAGGGATG
GTGAGGGCCAGCGACGGCCGGTGGGTTCTGCCAGAGAGGCCTAGGATGGAGGCCCACCCT
CCGGACACGGCCCACCACCTTGAACAGACCCATTTCCAATTACTTTTGCTTTTTTTAAAA
GCATCACTCCTCTCAAGCCCACAAAAAAATAAAAATAAAAATCAAACAGAATCTTATTCT
TATAAATAA

Peptide Sequence

PEP ID

VIT_06s0004g02390.t01
PEP Infomation

pep chromosome:12X:6:2836439:2838151:1 gene:VIT_06s0004g02390 transcript:VIT_06s0004g02390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASLLQTLNNPTYTSPSASLSVFRRWNRNSIRVLTIPNKPFSPKPTTLIKCSSVSSLTPR
LDHEPARELKQEDKPLRDVWEEIQGCNNWEGLLDPMNPNLRKEIIRYGEFAQACYDSFDF
DPHSKYCGTCKYQGAHFFQKLDMADRGYQISRYLYATSNINLPNFFQKSKMSSVWSPHAN
WMGYIAVTTDEKEIKRLGRRDIIIAWRGTVTYLEWIHDLKDILCPAHFRDDPNIKIESGF
YDLYTKKENNCKFCSFSAREQVLAEIKRLVERYKDEEISITITGHSLGAALALLSAYDIA
EMNLNVRNKSRIPISVFSFSGPRVGNLKFKERCDELGVKVLRVINVHDKVPTVPGIITNE
KFQYQKYIEETISFPWSYAHVGVELALDHTHSPFLKPTNDLGCAHNLEAHLHLVDGYHGK
DRKFSLATKRDIALVNKSCDFLRSEYGVPGNWRQDENKGMVRASDGRWVLPERPRMEAHP
PDTAHHLEQTHFQLLLLFLKASLLSSPQKNKNKNQTESYSYK

Transcript Sequence

Transcript ID

VIT_06s0004g02390.t01
Transcript Infomation

cdna chromosome:12X:6:2836439:2838151:1 gene:VIT_06s0004g02390 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACCAAAATAAAAAAAAAGGGAGGAAGATAGCCTTCCATGGCTTCCCTACTTCAAACTCT
CAATAACCCAACGTACACCTCCCCCTCGGCTTCTCTATCAGTCTTCCGAAGATGGAACCG
CAACTCCATCAGAGTTCTCACAATTCCAAACAAACCCTTTTCCCCAAAGCCTACAACACT
GATCAAATGCTCTTCGGTTTCAAGCCTAACCCCCAGGCTGGATCATGAACCAGCGCGAGA
ACTCAAACAAGAGGACAAGCCACTTCGAGATGTTTGGGAGGAAATTCAAGGGTGTAACAA
CTGGGAAGGCCTATTAGACCCCATGAACCCTAATCTCCGGAAAGAGATCATCCGATATGG
CGAATTTGCGCAGGCCTGCTACGACTCCTTCGACTTCGATCCTCACTCAAAATACTGCGG
AACCTGCAAGTACCAAGGTGCCCATTTCTTCCAAAAATTGGACATGGCTGATAGAGGGTA
CCAAATCAGCAGATATCTCTACGCAACCTCCAACATCAACCTCCCAAACTTCTTCCAGAA
ATCAAAGATGAGCAGTGTGTGGAGCCCCCACGCAAACTGGATGGGCTACATCGCAGTTAC
AACAGATGAAAAAGAGATCAAAAGATTAGGCCGGCGTGACATAATAATCGCATGGAGGGG
CACCGTCACATACCTCGAATGGATACACGACCTTAAGGACATCCTCTGTCCGGCCCATTT
CAGAGACGATCCCAACATCAAAATCGAGTCCGGGTTCTACGATTTGTACACCAAGAAAGA
GAACAACTGCAAATTCTGCTCATTCTCGGCTAGAGAACAAGTGCTCGCTGAAATCAAGAG
GCTGGTCGAGAGGTACAAGGACGAAGAAATCAGCATAACGATCACTGGGCACAGCCTTGG
CGCAGCCTTGGCTTTGTTGAGCGCTTATGACATAGCTGAAATGAACCTGAACGTAAGGAA
CAAATCAAGGATCCCAATTTCAGTCTTTTCCTTTTCAGGACCTCGAGTGGGCAATCTCAA
GTTCAAGGAGAGGTGTGATGAGCTGGGAGTGAAGGTCCTGAGAGTGATAAATGTCCATGA
TAAAGTCCCCACAGTGCCTGGAATCATCACAAACGAGAAGTTCCAATACCAAAAGTACAT
AGAGGAGACGATCTCCTTTCCCTGGAGCTATGCTCATGTAGGTGTGGAACTGGCATTAGA
CCACACCCACTCTCCATTTCTGAAGCCCACAAATGACCTTGGTTGTGCGCATAACCTTGA
AGCCCATCTGCATTTGGTCGACGGCTACCACGGGAAAGACCGGAAATTCAGCCTGGCGAC
GAAGCGGGATATCGCACTGGTGAACAAGAGCTGTGACTTCCTGAGGAGCGAGTACGGAGT
GCCGGGAAATTGGCGTCAAGATGAGAATAAAGGGATGGTGAGGGCCAGCGACGGCCGGTG
GGTTCTGCCAGAGAGGCCTAGGATGGAGGCCCACCCTCCGGACACGGCCCACCACCTTGA
ACAGACCCATTTCCAATTACTTTTGCTTTTTTTAAAAGCATCACTCCTCTCAAGCCCACA
AAAAAATAAAAATAAAAATCAAACAGAATCTTATTCTTATAAATAA