Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g02380.t01
CDS Infomation

cds chromosome:12X:6:2818767:2825190:-1 gene:VIT_06s0004g02380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCAGTGGAGTGGTGTGTGTGACAGGGGCATCAGGATACATAGCTTCATGGCTTGTG
AAGCTTCTTCTCCAACGTGGTTACACTGTCAAAGCCTCTGTTCGTGATCCAAATGATCCA
AAGAAGACAGAACATTTACTTTCCCTTGATGGTGCAAAAGAGAGACTTCACTTGTTCAAA
GCAAACTTACTGGAAGAAGGTTCCTTTGATTCTATAGTGGAAGGGTGTGTTGGTGTTTTT
CATACAGCCTCACCCTTTTTTCATGCAGTCACAGATCCACAGGCAGAATTAATTGATCCA
GCTGTGAAGGGAACACTTAATGTCCTTGGTTCATGTGCGAAAGCCTCATCTGTGAAGAGA
GTGGTTGTAACATCTTCTATAGCTGCAGTTGCATACAATAGAAACCCCAGAACTCCTGAT
GTTGTGGTTGATGAGACTTGGTTTACAGATCCAGACTTTTGTAAGGGGCTACAGCTTTGG
TACGTGGTCTCAAAGACTTTGGCTGAGGATGCTGCATGGAAATTTGCAAAAGAGAAGGGT
ATTGACATGGTCACTATAAACCCAGCAATGGTGATTGGTCCTCTTTTACAGCCAACACTT
AATACAAGTGCTGCTGCAATTTTGAATCTCATAAATGGAGGACAAACATTTCCCAATGCA
TCCTTTGGATGGGTTAATGTTAAAGATGTAGCTGAGGCACATATTCAAGCATTTGAGGTT
CCTTCAGCTAGTGGAAGATATTGTTTGGTTGAGAGAGTTGTCCACTACTCAGAGCTTGTG
AAGATTTTGAAAGAGCTTTTTCCTGATTTTCAACTCCCTGAGAAGTGTGCAGATGACAAA
CCTTTTGTGCCGACCTTCCAGGTGTCCAAAGAAAAGGCAAAAAGCTTGGGCATTGAGTTC
ATTCCCTTGGAGGTGAGCCTCAAGGAAACTGTGGAAAGCTTGAAGGAGAAGGAGTTTTTC
AGTCCCTGA

Peptide Sequence

PEP ID

VIT_06s0004g02380.t01
PEP Infomation

pep chromosome:12X:6:2818767:2825190:-1 gene:VIT_06s0004g02380 transcript:VIT_06s0004g02380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSGVVCVTGASGYIASWLVKLLLQRGYTVKASVRDPNDPKKTEHLLSLDGAKERLHLFK
ANLLEEGSFDSIVEGCVGVFHTASPFFHAVTDPQAELIDPAVKGTLNVLGSCAKASSVKR
VVVTSSIAAVAYNRNPRTPDVVVDETWFTDPDFCKGLQLWYVVSKTLAEDAAWKFAKEKG
IDMVTINPAMVIGPLLQPTLNTSAAAILNLINGGQTFPNASFGWVNVKDVAEAHIQAFEV
PSASGRYCLVERVVHYSELVKILKELFPDFQLPEKCADDKPFVPTFQVSKEKAKSLGIEF
IPLEVSLKETVESLKEKEFFSP

Transcript Sequence

Transcript ID

VIT_06s0004g02380.t01
Transcript Infomation

cdna chromosome:12X:6:2818767:2825190:-1 gene:VIT_06s0004g02380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAGAAGAAGAAGAAGAAGATGAGCAGTGGAGTGGTGTGTGTGACAGGGGCATCAGGAT
ACATAGCTTCATGGCTTGTGAAGCTTCTTCTCCAACGTGGTTACACTGTCAAAGCCTCTG
TTCGTGATCCAAATGATCCAAAGAAGACAGAACATTTACTTTCCCTTGATGGTGCAAAAG
AGAGACTTCACTTGTTCAAAGCAAACTTACTGGAAGAAGGTTCCTTTGATTCTATAGTGG
AAGGGTGTGTTGGTGTTTTTCATACAGCCTCACCCTTTTTTCATGCAGTCACAGATCCAC
AGGCAGAATTAATTGATCCAGCTGTGAAGGGAACACTTAATGTCCTTGGTTCATGTGCGA
AAGCCTCATCTGTGAAGAGAGTGGTTGTAACATCTTCTATAGCTGCAGTTGCATACAATA
GAAACCCCAGAACTCCTGATGTTGTGGTTGATGAGACTTGGTTTACAGATCCAGACTTTT
GTAAGGGGCTACAGCTTTGGTACGTGGTCTCAAAGACTTTGGCTGAGGATGCTGCATGGA
AATTTGCAAAAGAGAAGGGTATTGACATGGTCACTATAAACCCAGCAATGGTGATTGGTC
CTCTTTTACAGCCAACACTTAATACAAGTGCTGCTGCAATTTTGAATCTCATAAATGGAG
GACAAACATTTCCCAATGCATCCTTTGGATGGGTTAATGTTAAAGATGTAGCTGAGGCAC
ATATTCAAGCATTTGAGGTTCCTTCAGCTAGTGGAAGATATTGTTTGGTTGAGAGAGTTG
TCCACTACTCAGAGCTTGTGAAGATTTTGAAAGAGCTTTTTCCTGATTTTCAACTCCCTG
AGAAGTGTGCAGATGACAAACCTTTTGTGCCGACCTTCCAGGTGTCCAAAGAAAAGGCAA
AAAGCTTGGGCATTGAGTTCATTCCCTTGGAGGTGAGCCTCAAGGAAACTGTGGAAAGCT
TGAAGGAGAAGGAGTTTTTCAGTCCCTGAGTCTTGATGGTTAAGTCTTTTAAATAAATAA
TGGTGGTGACCTATATCATCCTCATTGGTGTCCCTTAGTTTTGGATGCATCATCCTATTG
AAATATTCTAGTGTGCCGGAACCATTTCCTGAAAATGGGAACTCATTTCCATGGTATTGT
TACAGTGACTAATTTTTCTGCTTTCTGGTCTAATTTTTCCTGTACT