Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g02280.t01
CDS Infomation

cds chromosome:12X:6:2688347:2698564:-1 gene:VIT_06s0004g02280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGAAGTCATCAGGAGCAGAGAAAAAGAGAGTGAAACGACAATCAGGATCTTTACAA
AATGGCATCAGAGATTCCAACTCCGACACTCCTCCCAGGAAACAAGCTGCAAAAAAGGAT
GTTTTTCAGTTGTTTGCTGAGAAAGTGAGGGATCACAAGGATCTGGTATCTAGGTGGGCT
GTCTTACAGGAGACACGTGTTGAATATTTTAGAGGGAAGGATTTTGTTAGCTTTTTGAGA
AATCATCCAGAACTTAAAGAGATACTCGAATCAGATAGAAACCTAGAAGTAGAAGATATT
GCCAATGTTCTATTGAGGAAGAATCTTTTAGTGCGCTGTGATCGTGTGGTGAAAACTGTT
CGACCTGGAAAGAAAAAACTGTCTACTTGGCCAGCACATTTAGAGATCTTCCCTGATCAT
TTATTTTCTGAAAATGATGCCTTTTTCGCATGGACATTTGTCAAACGGAGGCCATTGTGG
CAGACACTTCTCTCATTTTTCTGGCCTGTGTTGACTCTTGCTATTTGCTTGTTTCCGGTA
TATCCTCATAGGTGCAAGTTACTAGTACTATATACATGTGCTGGTGTTCTACTACTCATA
CTCTCCCTGCTATTATTGAGACTTGCAATTTTTGGTGCTTTATGGATAATTCTTGGAAAG
CGGGTCTGGTTTTTCCCTAACATCCTTGTAGAGGAAGTAACACTACGAGAATTATTCCGG
TTTTTGCCCAATAAAGATGAGGAGGAGCGCCCAAAGTGGACAGCTAGGCTTTTGTTTGCA
GTGTTGGCTGTGCTGTTTATATTGTTGCTGAGGCACCATGCCCCTGATGAAGCTGCAAGA
GCCAGGTATCAGAAGCGGGTCTCAAACATAATAGATGATGTTCTTGAGTGGTCACCAAGA
TTGGCTTTGTCTGGAATGATGGAGAAGCAGCAACCAGTAGTTGATGATGTCACAGAACCC
ACCAACGGTTTCACAGATGGGAGCAAAGCAAGCCCTGAAGAAGCGGTTTCACCTGATGGC
ACGGATGGAGAAACTGTCTCAGATCAACATGGGGATGGAGACGACGCTGGAACTAGGTTG
CATGATGATCAACAACATGATGAGGATCGTACGTGA

Peptide Sequence

PEP ID

VIT_06s0004g02280.t01
PEP Infomation

pep chromosome:12X:6:2688347:2698564:-1 gene:VIT_06s0004g02280 transcript:VIT_06s0004g02280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKKSSGAEKKRVKRQSGSLQNGIRDSNSDTPPRKQAAKKDVFQLFAEKVRDHKDLVSRWA
VLQETRVEYFRGKDFVSFLRNHPELKEILESDRNLEVEDIANVLLRKNLLVRCDRVVKTV
RPGKKKLSTWPAHLEIFPDHLFSENDAFFAWTFVKRRPLWQTLLSFFWPVLTLAICLFPV
YPHRCKLLVLYTCAGVLLLILSLLLLRLAIFGALWIILGKRVWFFPNILVEEVTLRELFR
FLPNKDEEERPKWTARLLFAVLAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPR
LALSGMMEKQQPVVDDVTEPTNGFTDGSKASPEEAVSPDGTDGETVSDQHGDGDDAGTRL
HDDQQHDEDRT

Transcript Sequence

Transcript ID

VIT_06s0004g02280.t01
Transcript Infomation

cdna chromosome:12X:6:2688347:2698564:-1 gene:VIT_06s0004g02280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGGAAAGTATTGTGAAAGAGCAAAGATGAAGAAGTCATCAGGAGCAGAGAAAAAGAGAG
TGAAACGACAATCAGGATCTTTACAAAATGGCATCAGAGATTCCAACTCCGACACTCCTC
CCAGGAAACAAGCTGCAAAAAAGGATGTTTTTCAGTTGTTTGCTGAGAAAGTGAGGGATC
ACAAGGATCTGGTATCTAGGTGGGCTGTCTTACAGGAGACACGTGTTGAATATTTTAGAG
GGAAGGATTTTGTTAGCTTTTTGAGAAATCATCCAGAACTTAAAGAGATACTCGAATCAG
ATAGAAACCTAGAAGTAGAAGATATTGCCAATGTTCTATTGAGGAAGAATCTTTTAGTGC
GCTGTGATCGTGTGGTGAAAACTGTTCGACCTGGAAAGAAAAAACTGTCTACTTGGCCAG
CACATTTAGAGATCTTCCCTGATCATTTATTTTCTGAAAATGATGCCTTTTTCGCATGGA
CATTTGTCAAACGGAGGCCATTGTGGCAGACACTTCTCTCATTTTTCTGGCCTGTGTTGA
CTCTTGCTATTTGCTTGTTTCCGGTATATCCTCATAGGTGCAAGTTACTAGTACTATATA
CATGTGCTGGTGTTCTACTACTCATACTCTCCCTGCTATTATTGAGACTTGCAATTTTTG
GTGCTTTATGGATAATTCTTGGAAAGCGGGTCTGGTTTTTCCCTAACATCCTTGTAGAGG
AAGTAACACTACGAGAATTATTCCGGTTTTTGCCCAATAAAGATGAGGAGGAGCGCCCAA
AGTGGACAGCTAGGCTTTTGTTTGCAGTGTTGGCTGTGCTGTTTATATTGTTGCTGAGGC
ACCATGCCCCTGATGAAGCTGCAAGAGCCAGGTATCAGAAGCGGGTCTCAAACATAATAG
ATGATGTTCTTGAGTGGTCACCAAGATTGGCTTTGTCTGGAATGATGGAGAAGCAGCAAC
CAGTAGTTGATGATGTCACAGAACCCACCAACGGTTTCACAGATGGGAGCAAAGCAAGCC
CTGAAGAAGCGGTTTCACCTGATGGCACGGATGGAGAAACTGTCTCAGATCAACATGGGG
ATGGAGACGACGCTGGAACTAGGTTGCATGATGATCAACAACATGATGAGGATCGTACGT
GATTGTAGATCATGCTATGCCTAGCAGACAACAGGTCATAGTTTGCTCTTTTTTGTGCCC
ATTTTGTTTTCTTTCTTTACTTATTTGTTTCTTCTTTTTTTTTTTGAAATTTATATACTT
TTTTGCTTTTCATCTTTGATTTTATGAATGTAGAACTATGTAATGAAAATCATGACAATA
AGCAGTTGGGTTTCCAATATGTGGTCCCATAATATAGGATACATGGAAATTGATGACTGC
TGACAATGTGGGGAGGCTTGTGAACCCACTTAAAAGATATTCTATATCGTACT