Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g01830.t01
CDS Infomation

cds chromosome:12X:6:2261800:2265841:1 gene:VIT_06s0004g01830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGATTATGAGGTGATAGAGCAGATTGGGAGAGGAGCTTTTGGAGCTGCCTTTCTT
GTTCTTCATAAAACCGAGAAAAAGAAGTATGTGCTGAAGAAGATTCGGTTGGCCAAACAA
ACAGAGAAGTTCAAGCGCACAGCCCATCAGGAGATGAATCTGATATCAAAGCTAAACAAC
CCTTACATTGTGGGGTATAAAGAAGCATGGGTGGAGAAGGGATGTTGTGTATGCATTGTG
ACAAGTTACTGTGAAGGAGGTGACATGGCTGAAATGATAAAGAAGGCAAGAGGAACCCTT
CTTCCTGAGGAGAAGCTCTGCAAGTGGATGGCCCAGCTATTGTTAGCTGTGGATTACCTT
CATTCCAACCGCGTCCTACACAGGGATCTTAAGTGCTCCAACATATTCCTTACAAAAAAC
AATGACATCCGGCTAGGTGACTTTGGACTTGCCAAACTGCTAAGCACAGATGATCTAGCT
TCCTCGATTGTAGGCACTCCAAACTACATGTGTCCAGAGCTCCTTGCTGATATACCATAT
GGCTACAAATCAGATATATGGTCCCTAGGCTGCTGTATGTTTGAAATGGCTGCACATCAT
CCTGCATTCAGAGCTCCTGATATGGCTGGACTCATCAACAAAATCAACCGATCCTCCATG
TCTTTGCTCCCAACTGTATATTCCTCTACACTGAAACAACTGATCAAGAGCATGCTAAGA
AAAAACCCGGAACACAGGCCAACTGCTGCTGAACTACTGAGGCATCCACATTTACAACCA
TACGTTGCTCAGTGCCAGAACATACCTCCTGTCTTTCTTCCAATAAAGTCTGAATACAAC
TCCAATGACAAAACCTCAGGAACGCGATCATCTAACAAGTCTAGCATTGACAAAGACAGC
AAAGGTGGAAAGTCAAGACTGAGGAAGGAGTTGGAAAATGTTCAGTTAGTTAAAGGAAAT
ACTGATGTGCATAAACAAAATCCGGCTTATAATCAAATGCCCACTTCTTCTGATTCCCTG
GAAGCTAGAGTCCACACCAAAAGGGTTGATCCTACCAGCTGCTATGACCAAATGCCTAAA
GCCAACAAGGGTTTGGTAGTTGACCCCAACTTCACTGAACAAACTGAAAATTCCAATGCA
GAAACCGCCTCAGTAAGAACATCAAGCACCCATCAGGAAGATGTGGAACCGGATGAGCTC
ATTTCTGAGTGTGCCCAGAAAGTGAAGAAAGAAGGGCAAGTTACTGATGAAGCAGACACA
GAAGAGGAGAGATTGGAAACACTGTATGCAGGGCCAATACCACCATCAGAAGCCATGAAA
ATTGCCAAACAAGAGCGTGAAATAGTACCGTCATGCTGCTTACACACAATGGAGAACCTC
AGTTCATATCCAGCAAATACTTCCATGGGAAACTCATCAATGGAAAGTACAGTGACACTT
CCCTCTGAAAATGAACAGGAAGCCAAAACAGACACTCTCATCATCCCTTTCCAAACACCC
AAAAAAGGGGCTCGTGAGCTGAACCGGGCGGTCAGTGACATCTCATCAATAATAACTCCA
AGTATGCTGAACAGCAACAACAGAAGTATTGATTTGGACCATCTGAACCAGCAGAGAGCA
GAAGCTCTTGAGTCACTGCTTGAGCTTTGTGCACGTTTACTCCGACAAGAAAGGCTGGAG
GAACTTGCAGGAGTGTTAAAACCATTTGGGGAAGAAGCAGTTTCATCAAGAGAAACTGCA
ATTTGGTTGACAAAGAGCATAGCAAGTTTAGGAAAACATAATGGGGGAAGCTAG

Peptide Sequence

PEP ID

VIT_06s0004g01830.t01
PEP Infomation

pep chromosome:12X:6:2261800:2265841:1 gene:VIT_06s0004g01830 transcript:VIT_06s0004g01830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEDYEVIEQIGRGAFGAAFLVLHKTEKKKYVLKKIRLAKQTEKFKRTAHQEMNLISKLNN
PYIVGYKEAWVEKGCCVCIVTSYCEGGDMAEMIKKARGTLLPEEKLCKWMAQLLLAVDYL
HSNRVLHRDLKCSNIFLTKNNDIRLGDFGLAKLLSTDDLASSIVGTPNYMCPELLADIPY
GYKSDIWSLGCCMFEMAAHHPAFRAPDMAGLINKINRSSMSLLPTVYSSTLKQLIKSMLR
KNPEHRPTAAELLRHPHLQPYVAQCQNIPPVFLPIKSEYNSNDKTSGTRSSNKSSIDKDS
KGGKSRLRKELENVQLVKGNTDVHKQNPAYNQMPTSSDSLEARVHTKRVDPTSCYDQMPK
ANKGLVVDPNFTEQTENSNAETASVRTSSTHQEDVEPDELISECAQKVKKEGQVTDEADT
EEERLETLYAGPIPPSEAMKIAKQEREIVPSCCLHTMENLSSYPANTSMGNSSMESTVTL
PSENEQEAKTDTLIIPFQTPKKGARELNRAVSDISSIITPSMLNSNNRSIDLDHLNQQRA
EALESLLELCARLLRQERLEELAGVLKPFGEEAVSSRETAIWLTKSIASLGKHNGGS

Transcript Sequence

Transcript ID

VIT_06s0004g01830.t01
Transcript Infomation

cdna chromosome:12X:6:2261800:2265841:1 gene:VIT_06s0004g01830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGATTATGAGGTGATAGAGCAGATTGGGAGAGGAGCTTTTGGAGCTGCCTTTCTT
GTTCTTCATAAAACCGAGAAAAAGAAGTATGTGCTGAAGAAGATTCGGTTGGCCAAACAA
ACAGAGAAGTTCAAGCGCACAGCCCATCAGGAGATGAATCTGATATCAAAGCTAAACAAC
CCTTACATTGTGGGGTATAAAGAAGCATGGGTGGAGAAGGGATGTTGTGTATGCATTGTG
ACAAGTTACTGTGAAGGAGGTGACATGGCTGAAATGATAAAGAAGGCAAGAGGAACCCTT
CTTCCTGAGGAGAAGCTCTGCAAGTGGATGGCCCAGCTATTGTTAGCTGTGGATTACCTT
CATTCCAACCGCGTCCTACACAGGGATCTTAAGTGCTCCAACATATTCCTTACAAAAAAC
AATGACATCCGGCTAGGTGACTTTGGACTTGCCAAACTGCTAAGCACAGATGATCTAGCT
TCCTCGATTGTAGGCACTCCAAACTACATGTGTCCAGAGCTCCTTGCTGATATACCATAT
GGCTACAAATCAGATATATGGTCCCTAGGCTGCTGTATGTTTGAAATGGCTGCACATCAT
CCTGCATTCAGAGCTCCTGATATGGCTGGACTCATCAACAAAATCAACCGATCCTCCATG
TCTTTGCTCCCAACTGTATATTCCTCTACACTGAAACAACTGATCAAGAGCATGCTAAGA
AAAAACCCGGAACACAGGCCAACTGCTGCTGAACTACTGAGGCATCCACATTTACAACCA
TACGTTGCTCAGTGCCAGAACATACCTCCTGTCTTTCTTCCAATAAAGTCTGAATACAAC
TCCAATGACAAAACCTCAGGAACGCGATCATCTAACAAGTCTAGCATTGACAAAGACAGC
AAAGGTGGAAAGTCAAGACTGAGGAAGGAGTTGGAAAATGTTCAGTTAGTTAAAGGAAAT
ACTGATGTGCATAAACAAAATCCGGCTTATAATCAAATGCCCACTTCTTCTGATTCCCTG
GAAGCTAGAGTCCACACCAAAAGGGTTGATCCTACCAGCTGCTATGACCAAATGCCTAAA
GCCAACAAGGGTTTGGTAGTTGACCCCAACTTCACTGAACAAACTGAAAATTCCAATGCA
GAAACCGCCTCAGTAAGAACATCAAGCACCCATCAGGAAGATGTGGAACCGGATGAGCTC
ATTTCTGAGTGTGCCCAGAAAGTGAAGAAAGAAGGGCAAGTTACTGATGAAGCAGACACA
GAAGAGGAGAGATTGGAAACACTGTATGCAGGGCCAATACCACCATCAGAAGCCATGAAA
ATTGCCAAACAAGAGCGTGAAATAGTACCGTCATGCTGCTTACACACAATGGAGAACCTC
AGTTCATATCCAGCAAATACTTCCATGGGAAACTCATCAATGGAAAGTACAGTGACACTT
CCCTCTGAAAATGAACAGGAAGCCAAAACAGACACTCTCATCATCCCTTTCCAAACACCC
AAAAAAGGGGCTCGTGAGCTGAACCGGGCGGTCAGTGACATCTCATCAATAATAACTCCA
AGTATGCTGAACAGCAACAACAGAAGTATTGATTTGGACCATCTGAACCAGCAGAGAGCA
GAAGCTCTTGAGTCACTGCTTGAGCTTTGTGCACGTTTACTCCGACAAGAAAGGCTGGAG
GAACTTGCAGGAGTGTTAAAACCATTTGGGGAAGAAGCAGTTTCATCAAGAGAAACTGCA
ATTTGGTTGACAAAGAGCATAGCAAGTTTAGGAAAACATAATGGGGGAAGCTAGCAACAC
TTGATAGATGGTGTAGGGAATTTTTCGGGTTTCTGCAGAGTGCCTTCAGGATAGCCTATC
TTCATCTCAGATCATCGGCATAGTTCAGCTAGGAAGTAACTCTCTTGTTTATTCTTCTGC
TTGCTTTTGAATTCTTGATTGTTGATAAGGTGGTGTTAGGTGTTATTTTTGAAACAGTTG
TTGAGATCAAAAGGGCATGATTTATACTTGTTTCTCAAGCTGTAAATCACAATTCCCAAA
ATTTGCACACCTGGAAGGGGGAGGATAAAAAAAGGAAAAAAAGAAAAAAAGGAGTTGGTC
ATGATCACAGCACACAGTTTAATCTTTTACAAATCTCATTCCTCCTTGCTCTT