Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g01800.t01
CDS Infomation

cds chromosome:12X:6:2228790:2231310:-1 gene:VIT_06s0004g01800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACTCAAACAACTGGCTATCTTTTCCTCTTTCTCCCACTCATTCCTCTTTGCCACTA
AATCTACATGCATCCCAGGCTCAGCAGTTTTCTCTAGGGTTAGTGAATGATAATATGGAA
AGCCCATTCCAAAACCAAGAGTGGAATTTAATCAACTCACACGGCAGCAGCGAAGTCCCA
AAGATTGCAGATTTTCTTGGTGTGAGCAAATCTGAAAACCAGGCAGATCTTGAGGCTTTT
AATGAAATTCAGGCGAATGATTCTGATTACTTTTTCCCAAACAACAGCCTCCTGCCGGTT
CCAAACCCCGTAGCAGCAGCAGCAGTAGTAGCCAGTCCCAATAGCTATGAGTTTCAAGAA
AACAATAACAATTTGCAGTCACTGACATTGTCCATGGGTAGTGGTAAAGGTTCAACATGT
GAAACCAGTGGCAACAGCAGTACTAGCATTGTGGAAGCTGCCCCCAGAAGGACATTGGAT
ACATTTGGGCAAAGAACATCAATATACCGGGGTGTAACCAGGCATAGATGGACAGGAAGG
TATGAAGCTCACCTTTGGGATAATAGTTGTAGAAGGGAAGGACAATCAAGAAAAGGTCGC
CAAGCAGGTGGGTATGACAAAGAAGAGAAAGCTGCTAGGGCTTATGATCTTGCCGCCTTG
AAGTACTGGGGAACATCCACAACTACCAATTTCCCGATCAGTAACTATGAGAGGGAACTG
GAGGAGATGAAGCACATGACCAGACAAGAATTTGTGGCCTCCATTAGAAGGAAGAGTAGT
GGGTTTTCTAGAGGTGCATCAATGTATCGTGGAGTTACAAGGCATCATCAACATGGAAGA
TGGCAGGCAAGGATTGGAAGAGTTGCCGGAAACAAAGACCTCTATTTGGGAACTTTTAGT
ACTGAGGAGGAAGCTGCAGAAGCCTATGATATTGCAGCAATAAAGTTCAGAGGCCTTAAT
GCAGTGACCAACTTTGACATGAATCGATACGATGTGAAGAGCATTCTTGAAAGCAACACT
CTTCCGATAGGTGGGGGAGCGGCCAAGCGGCTAAAGGAGGCTCAAGCAATTGAATCATCG
AGAAAACGGGAAGAAATGATAGCCCTAGGTTCAAGCTTCCAATATGGGAGCTCGAGCTCC
AGCAGGTTACAGACATATCCTCTAATGCAGCAGCAGTTTGAGCAACCTCAGCCTTTACTA
ACATTACAGAACCAAGAACCATTACTAACTTTGCAAAACCCTGAAATTTCTCAGTACCCC
CAAGACTCCCAGTTTCACCAAAACTACATCCAAACTCAGTTGCAGTTGCACCAGCAATCT
GGGTCGTACCTGAACCATTCAAGCCAAAGTCCTCAGTTCTACAACAGTTACCTCCACAAC
AACCCGGCTCTTCTTCATGGGCTGATGAGTATGGGCTCTTCTTCATCTGTCATGGAGAAT
AATGGGAGTTCTAGTGGGAGTTACAATGGAGGATACTTCAATAATGGACTTGGGGTTGCT
TCGAATTCTACGGTGGCTAGTGCAGTAGGATCAGCAGAGGAGCTTCCCCTCATCAAGGTT
GATTACGATATGCCGGCCGCAGGCTATGGCAGCTGGTCAGGTGACTCAGTTCAGGGACAG
AATGCTGGAGTTTTTACAATGTGGAATGACTGA

Peptide Sequence

PEP ID

VIT_06s0004g01800.t01
PEP Infomation

pep chromosome:12X:6:2228790:2231310:-1 gene:VIT_06s0004g01800 transcript:VIT_06s0004g01800.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNSNNWLSFPLSPTHSSLPLNLHASQAQQFSLGLVNDNMESPFQNQEWNLINSHGSSEVP
KIADFLGVSKSENQADLEAFNEIQANDSDYFFPNNSLLPVPNPVAAAAVVASPNSYEFQE
NNNNLQSLTLSMGSGKGSTCETSGNSSTSIVEAAPRRTLDTFGQRTSIYRGVTRHRWTGR
YEAHLWDNSCRREGQSRKGRQAGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEREL
EEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFS
TEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESNTLPIGGGAAKRLKEAQAIESS
RKREEMIALGSSFQYGSSSSSRLQTYPLMQQQFEQPQPLLTLQNQEPLLTLQNPEISQYP
QDSQFHQNYIQTQLQLHQQSGSYLNHSSQSPQFYNSYLHNNPALLHGLMSMGSSSSVMEN
NGSSSGSYNGGYFNNGLGVASNSTVASAVGSAEELPLIKVDYDMPAAGYGSWSGDSVQGQ
NAGVFTMWND

Transcript Sequence

Transcript ID

VIT_06s0004g01800.t01
Transcript Infomation

cdna chromosome:12X:6:2228790:2231310:-1 gene:VIT_06s0004g01800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCCATGAACTCAAACAACTGGCTATCTTTTCCTCTTTCTCCCACTCATTCCTCTTTGCCA
CTAAATCTACATGCATCCCAGGCTCAGCAGTTTTCTCTAGGGTTAGTGAATGATAATATG
GAAAGCCCATTCCAAAACCAAGAGTGGAATTTAATCAACTCACACGGCAGCAGCGAAGTC
CCAAAGATTGCAGATTTTCTTGGTGTGAGCAAATCTGAAAACCAGGCAGATCTTGAGGCT
TTTAATGAAATTCAGGCGAATGATTCTGATTACTTTTTCCCAAACAACAGCCTCCTGCCG
GTTCCAAACCCCGTAGCAGCAGCAGCAGTAGTAGCCAGTCCCAATAGCTATGAGTTTCAA
GAAAACAATAACAATTTGCAGTCACTGACATTGTCCATGGGTAGTGGTAAAGGTTCAACA
TGTGAAACCAGTGGCAACAGCAGTACTAGCATTGTGGAAGCTGCCCCCAGAAGGACATTG
GATACATTTGGGCAAAGAACATCAATATACCGGGGTGTAACCAGGCATAGATGGACAGGA
AGGTATGAAGCTCACCTTTGGGATAATAGTTGTAGAAGGGAAGGACAATCAAGAAAAGGT
CGCCAAGCAGGTGGGTATGACAAAGAAGAGAAAGCTGCTAGGGCTTATGATCTTGCCGCC
TTGAAGTACTGGGGAACATCCACAACTACCAATTTCCCGATCAGTAACTATGAGAGGGAA
CTGGAGGAGATGAAGCACATGACCAGACAAGAATTTGTGGCCTCCATTAGAAGGAAGAGT
AGTGGGTTTTCTAGAGGTGCATCAATGTATCGTGGAGTTACAAGGCATCATCAACATGGA
AGATGGCAGGCAAGGATTGGAAGAGTTGCCGGAAACAAAGACCTCTATTTGGGAACTTTT
AGTACTGAGGAGGAAGCTGCAGAAGCCTATGATATTGCAGCAATAAAGTTCAGAGGCCTT
AATGCAGTGACCAACTTTGACATGAATCGATACGATGTGAAGAGCATTCTTGAAAGCAAC
ACTCTTCCGATAGGTGGGGGAGCGGCCAAGCGGCTAAAGGAGGCTCAAGCAATTGAATCA
TCGAGAAAACGGGAAGAAATGATAGCCCTAGGTTCAAGCTTCCAATATGGGAGCTCGAGC
TCCAGCAGGTTACAGACATATCCTCTAATGCAGCAGCAGTTTGAGCAACCTCAGCCTTTA
CTAACATTACAGAACCAAGAACCATTACTAACTTTGCAAAACCCTGAAATTTCTCAGTAC
CCCCAAGACTCCCAGTTTCACCAAAACTACATCCAAACTCAGTTGCAGTTGCACCAGCAA
TCTGGGTCGTACCTGAACCATTCAAGCCAAAGTCCTCAGTTCTACAACAGTTACCTCCAC
AACAACCCGGCTCTTCTTCATGGGCTGATGAGTATGGGCTCTTCTTCATCTGTCATGGAG
AATAATGGGAGTTCTAGTGGGAGTTACAATGGAGGATACTTCAATAATGGACTTGGGGTT
GCTTCGAATTCTACGGTGGCTAGTGCAGTAGGATCAGCAGAGGAGCTTCCCCTCATCAAG
GTTGATTACGATATGCCGGCCGCAGGCTATGGCAGCTGGTCAGGTGACTCAGTTCAGGGA
CAGAATGCTGGAGTTTTTACAATGTGGAATGACTGA