Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g01720.t01
CDS Infomation

cds chromosome:12X:6:2112097:2116215:-1 gene:VIT_06s0004g01720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCGAGGGCAAGCATCGGAGAGAGTTACCGTAGTGCTGTCGATCGAGTGCTTGAAG
GGGAGCTCCAAGGGCGACGAGTGGACCGGCGACATGCTTCAGACAGGCGACATAGTGGAG
GAGATAAAGATCGGAAACTCCGTGTCCGTACGGGCGCCGTTCAAGAACGGCAAGGTCGGA
GTCCAGAGGCTTCTGCACAGCTCCTTCAAGTCCAGGGATACCTCGATCCAGGTCCGAGTT
CGGCGGGGAGATGACGAGCTCGCTGAGTTGCAGGCGTGTATTGTGCCGAACGAGTCGGCT
GGGAAAAAGCAGTACATGTTGAGAGCGATTGATGATCCGAACTACGCCGTCGGATTCTGT
GATCGGACGGAGTCGGAGTGCTTCGCTTTGCAAGCTTCAAGGAACTCCAGGATGGTTAGT
GCACTAACCAGGACTCAGCTTCAAGACGGATACGTCGCATATCCATGGGGGAGAAAAATG
CAGGAGTTTCTATCAGTTCCCAATTCAAGTTGCTTTCTTTCTATACTCCTCCTTCCAAAG
TCTTCGGATCGAGCTGCCTCTCGTTACAATGACCTAGAGGACACCCTTGCTAGAGCAAAT
GCATGGCTCACTGCATCTCAGTCTGCTGGGGTTCCCGTTGTCTTCATGAACATCCACACT
GAGTCCCTCCTTACCAAGATATCTGGAGAGACAGCTTCTTCCACTGTGAATATTGCTGGT
TCATTGTCAGATTTAGCTAATCTGGCAAATGCTAGCCTGTATGGTTTTGAGGATTACCAT
GGTGTGGACATTGGAGTGGTTAGGGCTGTTCGTCTCTGGTATGCACCTCTAGGGTGTGAG
TTTCCAATGGAGATCAAAATCAAAGAAAGTGATACAAAGCTCGGGTTTGCCATTAGTCGC
ACAGAAGAGGGCTTTATATACATATCATCAGTCATTGATGGTGATGACAATGCACCTTCA
ACCCGGTCGGGTCTTAGCAACCTTTACAAAGAAGCAATGGCTGCATCTAAGTTGCTTGTA
GTCTCAAGAGTATCAAACCAGAAAGTTCTTCCATGGATGGTTTCTTCAACAGGAGCAATC
CGATGCTTCGACACAGTCTCTCTCAGCCAGAAGCTGTCACTGCATCGGCATGCCAAGGTG
CCTATCCTCATTCATGTTTTCTTGTGGAACCAAGCATTGGCTTCTACCAGTGGATGCAGC
ACCAGGTCTGGGGCCATCTCCACCCCACCTGTCATGGCATTGCCCCCTGAAATTCAATTG
GCTCGTCAACCAAATGAGAATCAAATAATGCCTCTGCCCCCTGAAGCTCCTGATGACAGT
ATATCTTTAAGTGATGGGCGTGATCTGAGGCCGGGTAGAGACACAGCTGGGGACGTTTCC
TTCAGATTCCACGATTTTGCACTTCCAAACAACTGGGTATGA

Peptide Sequence

PEP ID

VIT_06s0004g01720.t01
PEP Infomation

pep chromosome:12X:6:2112097:2116215:-1 gene:VIT_06s0004g01720 transcript:VIT_06s0004g01720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDRGQASERVTVVLSIECLKGSSKGDEWTGDMLQTGDIVEEIKIGNSVSVRAPFKNGKVG
VQRLLHSSFKSRDTSIQVRVRRGDDELAELQACIVPNESAGKKQYMLRAIDDPNYAVGFC
DRTESECFALQASRNSRMVSALTRTQLQDGYVAYPWGRKMQEFLSVPNSSCFLSILLLPK
SSDRAASRYNDLEDTLARANAWLTASQSAGVPVVFMNIHTESLLTKISGETASSTVNIAG
SLSDLANLANASLYGFEDYHGVDIGVVRAVRLWYAPLGCEFPMEIKIKESDTKLGFAISR
TEEGFIYISSVIDGDDNAPSTRSGLSNLYKEAMAASKLLVVSRVSNQKVLPWMVSSTGAI
RCFDTVSLSQKLSLHRHAKVPILIHVFLWNQALASTSGCSTRSGAISTPPVMALPPEIQL
ARQPNENQIMPLPPEAPDDSISLSDGRDLRPGRDTAGDVSFRFHDFALPNNWV

Transcript Sequence

Transcript ID

VIT_06s0004g01720.t01
Transcript Infomation

cdna chromosome:12X:6:2112097:2116215:-1 gene:VIT_06s0004g01720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTTCTCCCCAAGCCAAAACCCGATTCAACAATTATATAATTCGGTAATTCACTTCTCAA
TGACGATGAATTTCGAGTTTTGATGAGTTTTTGTGGTTGAATTTTTCAAAAAAAAAAAAA
AAAGGGTGAAAATTGGAGAAGAAAATGACAATGGATCGAGGGCAAGCATCGGAGAGAGTT
ACCGTAGTGCTGTCGATCGAGTGCTTGAAGGGGAGCTCCAAGGGCGACGAGTGGACCGGC
GACATGCTTCAGACAGGCGACATAGTGGAGGAGATAAAGATCGGAAACTCCGTGTCCGTA
CGGGCGCCGTTCAAGAACGGCAAGGTCGGAGTCCAGAGGCTTCTGCACAGCTCCTTCAAG
TCCAGGGATACCTCGATCCAGGTCCGAGTTCGGCGGGGAGATGACGAGCTCGCTGAGTTG
CAGGCGTGTATTGTGCCGAACGAGTCGGCTGGGAAAAAGCAGTACATGTTGAGAGCGATT
GATGATCCGAACTACGCCGTCGGATTCTGTGATCGGACGGAGTCGGAGTGCTTCGCTTTG
CAAGCTTCAAGGAACTCCAGGATGGTTAGTGCACTAACCAGGACTCAGCTTCAAGACGGA
TACGTCGCATATCCATGGGGGAGAAAAATGCAGGAGTTTCTATCAGTTCCCAATTCAAGT
TGCTTTCTTTCTATACTCCTCCTTCCAAAGTCTTCGGATCGAGCTGCCTCTCGTTACAAT
GACCTAGAGGACACCCTTGCTAGAGCAAATGCATGGCTCACTGCATCTCAGTCTGCTGGG
GTTCCCGTTGTCTTCATGAACATCCACACTGAGTCCCTCCTTACCAAGATATCTGGAGAG
ACAGCTTCTTCCACTGTGAATATTGCTGGTTCATTGTCAGATTTAGCTAATCTGGCAAAT
GCTAGCCTGTATGGTTTTGAGGATTACCATGGTGTGGACATTGGAGTGGTTAGGGCTGTT
CGTCTCTGGTATGCACCTCTAGGGTGTGAGTTTCCAATGGAGATCAAAATCAAAGAAAGT
GATACAAAGCTCGGGTTTGCCATTAGTCGCACAGAAGAGGGCTTTATATACATATCATCA
GTCATTGATGGTGATGACAATGCACCTTCAACCCGGTCGGGTCTTAGCAACCTTTACAAA
GAAGCAATGGCTGCATCTAAGTTGCTTGTAGTCTCAAGAGTATCAAACCAGAAAGTTCTT
CCATGGATGGTTTCTTCAACAGGAGCAATCCGATGCTTCGACACAGTCTCTCTCAGCCAG
AAGCTGTCACTGCATCGGCATGCCAAGGTGCCTATCCTCATTCATGTTTTCTTGTGGAAC
CAAGCATTGGCTTCTACCAGTGGATGCAGCACCAGGTCTGGGGCCATCTCCACCCCACCT
GTCATGGCATTGCCCCCTGAAATTCAATTGGCTCGTCAACCAAATGAGAATCAAATAATG
CCTCTGCCCCCTGAAGCTCCTGATGACAGTATATCTTTAAGTGATGGGCGTGATCTGAGG
CCGGGTAGAGACACAGCTGGGGACGTTTCCTTCAGATTCCACGATTTTGCACTTCCAAAC
AACTGGGTATGATTTTTGGTCTGTACCGTATTTTCTTCATTTGGTTGTTGTACATAGAAA
AAAATCTTGTAACACTACTATAGGTTGAAGCTGGTTTTTCATGGTTAGCTGGAAAGAAGA
TAAAAAGGGTATAGAAGTATTCACAGAATAGAGTGTATTGTGCCGAACGACGTATCATTG
TTCCCTTTAGTCATATGGGTTTTAGG