Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g01680.t01
CDS Infomation

cds chromosome:12X:6:2073735:2076455:-1 gene:VIT_06s0004g01680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCTGCTACTCCTGCTACTCAAGTCTTTCAAGGCCACAACAGCAACGGCGATCAT
GAAGTTAGCAGACAAGAAATTCAGGCCGCCATTGCTAAAGCAGTTGAGCTCAGAGCTCTT
CATGCTGCTTTGATACAAGGCAATAGCCCAGCCAATCTCAAGTACCCAACTGCTTCCCCT
GTTTCACGCCCTCCTTCTCACTTCTCTGCTCAAGATTACCCTGTTTTCACTCCTAGTTAC
GGAGATGAACCATTACCTGGGTACCATCAACTTCATGTTGAAAATGATCGAAATTTGTCC
GAAAGTTGGGATATGGAAGGGCTAGGAGGAAATGATAATGAAACCATTATGTCGGATTAC
AAAAAGGAGATTTCTTCAAGGAAGGGATTGCCTTCTGGTTTAGTCAGCTTAGAGCCCCAT
GTTTGTCCAACTGAAGATCAGAAGTCACTCACCAGTGCCTGTGCAAACCACATCACTGTG
CTTCAAACATCGCCTGGAACCGATTTCTTCAAGTCCAGTAGGAGAAACAGTCTGGGGGAG
TTCAAATCCCTCTCATCTTGCAACAAATGCAGACCTGCAATCATAAGCACCGAAGCCGAA
AATACGGTCAAGAACAGTAAGGGTTCTAGTTTTGTGGTGCCCTTGACTGATTCCCATTCC
TCAGTTCAATCACAGCCTAAGAACCGGGGAGTGAGCCTCTCATGGTTGTTTCCAAGGTTA
AAGAAGAAGCACAAGAATGAGAGTTCCCCAAACCGAACAGAATCCGAGGAAGTATCACAA
ATTTTCAAAGACTTGGGGATAATGTCCATTGAGACATTGAAGAAAGAGCTGATGGATGCA
AATGAGAGTAGAGATGCAGCCTTAATGGAGGTTGCAGAGATGAAATCTTCTCTGGGGGAG
CTGAAACAGAAGCTGGAGTACTTGGAGACTTACTGTGAAGAGCTCAAGAGAGTTCTGAAG
CAAACAGCTCAGGCAAAGGACTTGCAGGCTCCGGAAAAGCTCAGAAGTCTTCCAAAGAGG
GGGAAATCATCCATTGATGGGAATGGAGAAAACTTCATTCCAGTCAGTGAGGAAGTAATG
GTGGAGGGCTTCTTGCAGATAGTATCAGAAGCAAGATTATCAGTAAAACAATTCTGCAAG
ATCCTTATCGGCCAAATTGAAGAATCCGATAATACCCTAACAGACAACTTGAATTCTCTT
CTTCAACCATATAAACTGTCTCTGACATCAAAGTACTCAAAGGCAGTGCTGTACCATCTT
GAAGCCATCATAAACCAGTCACTCTACCAAGACTTTGAGAACTGTGTGTTCCAGAAGAAC
GGCACGGCCAAGCTCTTAGACCCTCATCAAGATCGCCAGGCACGGTTTTCATCCTTTGTC
GCATTGAGAAACCTAAGCTGGAATGAGGTACTGAGGAAAGGGACCAAGTACTACAGTGAA
GAGTTCAGCAAGTTCTGTGATCAGAAGATGAGTTGCATCATTTCAACTCTGAATTGGACG
AGGCCATGGCCTGAGCAGCTCCTCCAATCCTTCTTTGTTTCAGCCAAATGCATATGGTTG
CTTCATTTGCTTGCTTTTTCGTTCAACCCCCCTCTGGGAATCCTCAGAGTTGAAGAAAAC
AGAAGCTTTGATCCTCATTACATGGAAGATATGTTCATGGATAGGCAGAGATCACAGGGT
CCGAGCCGGGTTAAGATCATGGTGATGCCTGGTTTCTATGTTCAAGACAGGGTTCTAAGG
TGTAAGGTTCTATGCAGATACAAATCTGTAGCCTAA

Peptide Sequence

PEP ID

VIT_06s0004g01680.t01
PEP Infomation

pep chromosome:12X:6:2073735:2076455:-1 gene:VIT_06s0004g01680 transcript:VIT_06s0004g01680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAATPATQVFQGHNSNGDHEVSRQEIQAAIAKAVELRALHAALIQGNSPANLKYPTASP
VSRPPSHFSAQDYPVFTPSYGDEPLPGYHQLHVENDRNLSESWDMEGLGGNDNETIMSDY
KKEISSRKGLPSGLVSLEPHVCPTEDQKSLTSACANHITVLQTSPGTDFFKSSRRNSLGE
FKSLSSCNKCRPAIISTEAENTVKNSKGSSFVVPLTDSHSSVQSQPKNRGVSLSWLFPRL
KKKHKNESSPNRTESEEVSQIFKDLGIMSIETLKKELMDANESRDAALMEVAEMKSSLGE
LKQKLEYLETYCEELKRVLKQTAQAKDLQAPEKLRSLPKRGKSSIDGNGENFIPVSEEVM
VEGFLQIVSEARLSVKQFCKILIGQIEESDNTLTDNLNSLLQPYKLSLTSKYSKAVLYHL
EAIINQSLYQDFENCVFQKNGTAKLLDPHQDRQARFSSFVALRNLSWNEVLRKGTKYYSE
EFSKFCDQKMSCIISTLNWTRPWPEQLLQSFFVSAKCIWLLHLLAFSFNPPLGILRVEEN
RSFDPHYMEDMFMDRQRSQGPSRVKIMVMPGFYVQDRVLRCKVLCRYKSVA

Transcript Sequence

Transcript ID

VIT_06s0004g01680.t01
Transcript Infomation

cdna chromosome:12X:6:2073735:2076455:-1 gene:VIT_06s0004g01680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCTCTCACACACACACACACAGCTTCACATGCCCTCATTTCATCAAGCCATTGAGGA
CAAAGACAAAGCTTCCTTGGATTTTTGATACCTCCAACTCTCTCTCTTGTTTCTCTGGTT
CTCCAAGATCCTTCATTGGATATGATCTTCATCTCTGTAAATCAAATCCAACCGTTGGAT
ACCCACTTCTTCATCTCTTTTGTTCTCTTCTTCCCTCCCAACTTTATCTGATTTCCATAT
TCCTCTTCTCTGGTTTTCATGTTCTCCCCTGTTTTTATCTCTACTCTGTTTTCTTCCTCT
TCTGCTTCTTTATTTCATGGCTGCTGCTACTCCTGCTACTCAAGTCTTTCAAGGCCACAA
CAGCAACGGCGATCATGAAGTTAGCAGACAAGAAATTCAGGCCGCCATTGCTAAAGCAGT
TGAGCTCAGAGCTCTTCATGCTGCTTTGATACAAGGCAATAGCCCAGCCAATCTCAAGTA
CCCAACTGCTTCCCCTGTTTCACGCCCTCCTTCTCACTTCTCTGCTCAAGATTACCCTGT
TTTCACTCCTAGTTACGGAGATGAACCATTACCTGGGTACCATCAACTTCATGTTGAAAA
TGATCGAAATTTGTCCGAAAGTTGGGATATGGAAGGGCTAGGAGGAAATGATAATGAAAC
CATTATGTCGGATTACAAAAAGGAGATTTCTTCAAGGAAGGGATTGCCTTCTGGTTTAGT
CAGCTTAGAGCCCCATGTTTGTCCAACTGAAGATCAGAAGTCACTCACCAGTGCCTGTGC
AAACCACATCACTGTGCTTCAAACATCGCCTGGAACCGATTTCTTCAAGTCCAGTAGGAG
AAACAGTCTGGGGGAGTTCAAATCCCTCTCATCTTGCAACAAATGCAGACCTGCAATCAT
AAGCACCGAAGCCGAAAATACGGTCAAGAACAGTAAGGGTTCTAGTTTTGTGGTGCCCTT
GACTGATTCCCATTCCTCAGTTCAATCACAGCCTAAGAACCGGGGAGTGAGCCTCTCATG
GTTGTTTCCAAGGTTAAAGAAGAAGCACAAGAATGAGAGTTCCCCAAACCGAACAGAATC
CGAGGAAGTATCACAAATTTTCAAAGACTTGGGGATAATGTCCATTGAGACATTGAAGAA
AGAGCTGATGGATGCAAATGAGAGTAGAGATGCAGCCTTAATGGAGGTTGCAGAGATGAA
ATCTTCTCTGGGGGAGCTGAAACAGAAGCTGGAGTACTTGGAGACTTACTGTGAAGAGCT
CAAGAGAGTTCTGAAGCAAACAGCTCAGGCAAAGGACTTGCAGGCTCCGGAAAAGCTCAG
AAGTCTTCCAAAGAGGGGGAAATCATCCATTGATGGGAATGGAGAAAACTTCATTCCAGT
CAGTGAGGAAGTAATGGTGGAGGGCTTCTTGCAGATAGTATCAGAAGCAAGATTATCAGT
AAAACAATTCTGCAAGATCCTTATCGGCCAAATTGAAGAATCCGATAATACCCTAACAGA
CAACTTGAATTCTCTTCTTCAACCATATAAACTGTCTCTGACATCAAAGTACTCAAAGGC
AGTGCTGTACCATCTTGAAGCCATCATAAACCAGTCACTCTACCAAGACTTTGAGAACTG
TGTGTTCCAGAAGAACGGCACGGCCAAGCTCTTAGACCCTCATCAAGATCGCCAGGCACG
GTTTTCATCCTTTGTCGCATTGAGAAACCTAAGCTGGAATGAGGTACTGAGGAAAGGGAC
CAAGTACTACAGTGAAGAGTTCAGCAAGTTCTGTGATCAGAAGATGAGTTGCATCATTTC
AACTCTGAATTGGACGAGGCCATGGCCTGAGCAGCTCCTCCAATCCTTCTTTGTTTCAGC
CAAATGCATATGGTTGCTTCATTTGCTTGCTTTTTCGTTCAACCCCCCTCTGGGAATCCT
CAGAGTTGAAGAAAACAGAAGCTTTGATCCTCATTACATGGAAGATATGTTCATGGATAG
GCAGAGATCACAGGGTCCGAGCCGGGTTAAGATCATGGTGATGCCTGGTTTCTATGTTCA
AGACAGGGTTCTAAGGTGTAAGGTTCTATGCAGATACAAATCTGTAGCCTAATTTAAAGA
TTTTCTTCTCCCAAGAAA