Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g01650.t01
CDS Infomation

cds chromosome:12X:6:2042021:2047648:-1 gene:VIT_06s0004g01650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGGTACTGTGTTGAATCAGGCGTTGGTTGTCGTTGTTGTTTTTGTGTTATGTGGG
TGTGGTTTGGGGAAGAAGTGTACAAACTCAGGATCTCCTCTCTCATCACACACCCTCAGA
TATGAGCTCTTATTCTCCAAGAATGAATCCAGGAAGGCAGAGGCGTTGGCCCACTATTCT
AATTTGATTCGCACTGATGGTTCTGGATGGTTGACCTCGCTTCCCAGGAAGGCTTTAAGG
GAAGAAGATGAGTTCAGTAGGGCTATGAAGTATCAGACAATGAAGAGTTATGATGGGTCA
AATTCAAAATTCCTTAAGGAATTTTCTTTACATGATGTGAGATTGGGTTCTGATTCTTTA
CATTGGAGGGCACAGCAGACCAATTTGGAGTATTTGTTGATGCTGGATGCGGATAGACTG
GTGTGGAGTTTCAGAAGAACAGCAGGCTTGCCAACTCCTTGCTCTCCCTATGGAGGTTGG
GAGTCCCCTGATGGTGAACTCCGGGGTCATTTTGTAGGGCATTACCTGAGTGCATCGGCG
CAAATGTGGGCCAGCACTCACAATGAGAGTCTTAAAGAGAAAATGTCGGCAGTGGTTTGC
GCTCTTGGTGAATGTCAAAAGAAAATGGGCACTGGTTATCTATCTGCTTTCCCATCTGAG
CTATTTGATCGTTTTGAAGCTCTAGAAGAAGTTTGGGCTCCATATTACACCATTCACAAG
ATATTGGCAGGGCTTTTGGATCAATATACGTTGGGTGGTAATGCCCAAGCTTTGAAAATG
GTGACATGGATGGTTGAGTACTTCTACAACCGTGTGCAAAATGTGATATCAAGTTATAGT
ATTGAAAGACACTGGTTGTCACTTAATGAAGAAACCGGTGGCATGAATGATTTTCTTTAC
AACCTATACCGCATAACGGGAGATCAAAAACATTTTGTGCTGGCTCACCTTTTTGACAAA
CCATGCTTTTTAGGTTTGCTTGCAATGCAGGCTGATGACATATCTGGATTTCATGCCAAT
ACACATATCCCAATTGTTGTTGGAGCTCAAATGCGGTATGAAATCACTGGTGATCCACTT
TATAAGACAATAGGAGCATTCTTCATAGACACTGTTAACTCCTCTCATAGCTATGCAACT
GGAGGGACATCGGTCGATGAGTTCTGGTCAGATCCCAAGCGGATGGCAACAACACTTCAG
ACAGAGAATGCAGAATCATGCACAACATATAACATGCTAAAGGTTTCCCGCAACCTCTTT
AGGTGGACAAAAGAAGTGGCATATGCCGATTATTACGAGCGAGCCCTGACAAATGGCATT
TTAAGCATTCAAAGAGGAACAGATCCTGGAGTGATGCTATACATGCTCCCGCTAGGTCAT
GGAAATTCCAAGGCCCGAAGCTACCATGGGTGGGGGACAAAGTTTCACTCTTTCTGGTGC
TGCTATGGGACAGGAATTGAGTCATTCTCAAAGTTAGGAGACTCCATATACTTTGAGGAG
GAGGGAGAAGTTCCTGGGCTTTACATAATTCAGTACATATCAAGCTCACTTGACTGGAAA
TCTGGACAGGTGGTTCTGAACCAAAAAGTAGATACTGTTGTTTCTTGGGATCCTTACCTT
CGAATCACTTTGACATTTTCTCCAAAGAAGATGCAGGGGGCAGGCCAATCTTCTGCCATA
AATTTGCGGATACCGGTTTGGGCATATTCAAGTGGTGCCAAGGCAGCAGTAAATGCCCAG
GCTTTGCCTGTACCTGCTCCAAATAGTTTCCTATCATTCAGAAGAAAATGGAGCCCTGAT
GACAAGTTGACCCTACAGCTGCCCATTGCATTAAGAACAGAGGCTATCAAAGATGACCGG
CCCAAGTATGCATGTCTTCAGGCTATACTTTATGGCCCCTACCTTCTTGTGGGTTTGACT
AACAATGACTGGGACATCCAAACCGATTTGGCTGCCTCACTTTCAGACTGGATAACTCCA
ATTCCTGCCTCTCACAATTCTCATCTGATTTCGCTATCCCAAGAGTCTGGAAACTCAAGT
TTTGCCTTCACAAATTCGAACCAATCACTTACAATGGAGAGGTACCCTGAATCGGGTACT
GATGCTTCTCTCAATGCCACTTTTAGACTCATCCTAGAAGACTCAACTTCTTCAAAAATT
TCATCACCAAAAGATGCCATTGGAAAATTCGTCATGCTAGAACCGATTAACTTTCCTGGA
ATGGCAGTGGTGCAGCGAGGAACAAATGAAAGCCTTGGCATCACGAATTCTGCTAGTGTC
GTAGGCTCTTCTTTGTTCCATTTGGTTGCAGGATTGGATGGAAAGGATGGGACAGTTTCC
TTAGAGTCAAAAACCCAGAAAGGTTGCTTCGTCTACAGTGATGTGAACTATGATTCAGGT
TCAGCCATTAAGCTCAAGTGCAAACTGGCTTCATCTGATGTTGTTTTTAATCAGGCAACC
AGCTTCACATTGAAACATGGCATCAGTGAGTATCATCCCATCAGCTTTGTGGCAAAAGGG
TTGAGAAGGGATTATCTTCTAGCACCATTGCTAAGCTTGAGAGATGAATCTTATACAGTG
TATTTCAACATCCAAGCTTCAAATGGTTTAAGGTCCGCATCCTAG

Peptide Sequence

PEP ID

VIT_06s0004g01650.t01
PEP Infomation

pep chromosome:12X:6:2042021:2047648:-1 gene:VIT_06s0004g01650 transcript:VIT_06s0004g01650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKGTVLNQALVVVVVFVLCGCGLGKKCTNSGSPLSSHTLRYELLFSKNESRKAEALAHYS
NLIRTDGSGWLTSLPRKALREEDEFSRAMKYQTMKSYDGSNSKFLKEFSLHDVRLGSDSL
HWRAQQTNLEYLLMLDADRLVWSFRRTAGLPTPCSPYGGWESPDGELRGHFVGHYLSASA
QMWASTHNESLKEKMSAVVCALGECQKKMGTGYLSAFPSELFDRFEALEEVWAPYYTIHK
ILAGLLDQYTLGGNAQALKMVTWMVEYFYNRVQNVISSYSIERHWLSLNEETGGMNDFLY
NLYRITGDQKHFVLAHLFDKPCFLGLLAMQADDISGFHANTHIPIVVGAQMRYEITGDPL
YKTIGAFFIDTVNSSHSYATGGTSVDEFWSDPKRMATTLQTENAESCTTYNMLKVSRNLF
RWTKEVAYADYYERALTNGILSIQRGTDPGVMLYMLPLGHGNSKARSYHGWGTKFHSFWC
CYGTGIESFSKLGDSIYFEEEGEVPGLYIIQYISSSLDWKSGQVVLNQKVDTVVSWDPYL
RITLTFSPKKMQGAGQSSAINLRIPVWAYSSGAKAAVNAQALPVPAPNSFLSFRRKWSPD
DKLTLQLPIALRTEAIKDDRPKYACLQAILYGPYLLVGLTNNDWDIQTDLAASLSDWITP
IPASHNSHLISLSQESGNSSFAFTNSNQSLTMERYPESGTDASLNATFRLILEDSTSSKI
SSPKDAIGKFVMLEPINFPGMAVVQRGTNESLGITNSASVVGSSLFHLVAGLDGKDGTVS
LESKTQKGCFVYSDVNYDSGSAIKLKCKLASSDVVFNQATSFTLKHGISEYHPISFVAKG
LRRDYLLAPLLSLRDESYTVYFNIQASNGLRSAS

Transcript Sequence

Transcript ID

VIT_06s0004g01650.t01
Transcript Infomation

cdna chromosome:12X:6:2042021:2047648:-1 gene:VIT_06s0004g01650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGGCAGCTTGATGATATTTCTTATCTGAATTTGAGCTTAGAAGGGGGGGTTTTCCCTGT
GAATTTGTGTGGAAAAATGAAGGGTACTGTGTTGAATCAGGCGTTGGTTGTCGTTGTTGT
TTTTGTGTTATGTGGGTGTGGTTTGGGGAAGAAGTGTACAAACTCAGGATCTCCTCTCTC
ATCACACACCCTCAGATATGAGCTCTTATTCTCCAAGAATGAATCCAGGAAGGCAGAGGC
GTTGGCCCACTATTCTAATTTGATTCGCACTGATGGTTCTGGATGGTTGACCTCGCTTCC
CAGGAAGGCTTTAAGGGAAGAAGATGAGTTCAGTAGGGCTATGAAGTATCAGACAATGAA
GAGTTATGATGGGTCAAATTCAAAATTCCTTAAGGAATTTTCTTTACATGATGTGAGATT
GGGTTCTGATTCTTTACATTGGAGGGCACAGCAGACCAATTTGGAGTATTTGTTGATGCT
GGATGCGGATAGACTGGTGTGGAGTTTCAGAAGAACAGCAGGCTTGCCAACTCCTTGCTC
TCCCTATGGAGGTTGGGAGTCCCCTGATGGTGAACTCCGGGGTCATTTTGTAGGGCATTA
CCTGAGTGCATCGGCGCAAATGTGGGCCAGCACTCACAATGAGAGTCTTAAAGAGAAAAT
GTCGGCAGTGGTTTGCGCTCTTGGTGAATGTCAAAAGAAAATGGGCACTGGTTATCTATC
TGCTTTCCCATCTGAGCTATTTGATCGTTTTGAAGCTCTAGAAGAAGTTTGGGCTCCATA
TTACACCATTCACAAGATATTGGCAGGGCTTTTGGATCAATATACGTTGGGTGGTAATGC
CCAAGCTTTGAAAATGGTGACATGGATGGTTGAGTACTTCTACAACCGTGTGCAAAATGT
GATATCAAGTTATAGTATTGAAAGACACTGGTTGTCACTTAATGAAGAAACCGGTGGCAT
GAATGATTTTCTTTACAACCTATACCGCATAACGGGAGATCAAAAACATTTTGTGCTGGC
TCACCTTTTTGACAAACCATGCTTTTTAGGTTTGCTTGCAATGCAGGCTGATGACATATC
TGGATTTCATGCCAATACACATATCCCAATTGTTGTTGGAGCTCAAATGCGGTATGAAAT
CACTGGTGATCCACTTTATAAGACAATAGGAGCATTCTTCATAGACACTGTTAACTCCTC
TCATAGCTATGCAACTGGAGGGACATCGGTCGATGAGTTCTGGTCAGATCCCAAGCGGAT
GGCAACAACACTTCAGACAGAGAATGCAGAATCATGCACAACATATAACATGCTAAAGGT
TTCCCGCAACCTCTTTAGGTGGACAAAAGAAGTGGCATATGCCGATTATTACGAGCGAGC
CCTGACAAATGGCATTTTAAGCATTCAAAGAGGAACAGATCCTGGAGTGATGCTATACAT
GCTCCCGCTAGGTCATGGAAATTCCAAGGCCCGAAGCTACCATGGGTGGGGGACAAAGTT
TCACTCTTTCTGGTGCTGCTATGGGACAGGAATTGAGTCATTCTCAAAGTTAGGAGACTC
CATATACTTTGAGGAGGAGGGAGAAGTTCCTGGGCTTTACATAATTCAGTACATATCAAG
CTCACTTGACTGGAAATCTGGACAGGTGGTTCTGAACCAAAAAGTAGATACTGTTGTTTC
TTGGGATCCTTACCTTCGAATCACTTTGACATTTTCTCCAAAGAAGATGCAGGGGGCAGG
CCAATCTTCTGCCATAAATTTGCGGATACCGGTTTGGGCATATTCAAGTGGTGCCAAGGC
AGCAGTAAATGCCCAGGCTTTGCCTGTACCTGCTCCAAATAGTTTCCTATCATTCAGAAG
AAAATGGAGCCCTGATGACAAGTTGACCCTACAGCTGCCCATTGCATTAAGAACAGAGGC
TATCAAAGATGACCGGCCCAAGTATGCATGTCTTCAGGCTATACTTTATGGCCCCTACCT
TCTTGTGGGTTTGACTAACAATGACTGGGACATCCAAACCGATTTGGCTGCCTCACTTTC
AGACTGGATAACTCCAATTCCTGCCTCTCACAATTCTCATCTGATTTCGCTATCCCAAGA
GTCTGGAAACTCAAGTTTTGCCTTCACAAATTCGAACCAATCACTTACAATGGAGAGGTA
CCCTGAATCGGGTACTGATGCTTCTCTCAATGCCACTTTTAGACTCATCCTAGAAGACTC
AACTTCTTCAAAAATTTCATCACCAAAAGATGCCATTGGAAAATTCGTCATGCTAGAACC
GATTAACTTTCCTGGAATGGCAGTGGTGCAGCGAGGAACAAATGAAAGCCTTGGCATCAC
GAATTCTGCTAGTGTCGTAGGCTCTTCTTTGTTCCATTTGGTTGCAGGATTGGATGGAAA
GGATGGGACAGTTTCCTTAGAGTCAAAAACCCAGAAAGGTTGCTTCGTCTACAGTGATGT
GAACTATGATTCAGGTTCAGCCATTAAGCTCAAGTGCAAACTGGCTTCATCTGATGTTGT
TTTTAATCAGGCAACCAGCTTCACATTGAAACATGGCATCAGTGAGTATCATCCCATCAG
CTTTGTGGCAAAAGGGTTGAGAAGGGATTATCTTCTAGCACCATTGCTAAGCTTGAGAGA
TGAATCTTATACAGTGTATTTCAACATCCAAGCTTCAAATGGTTTAAGGTCCGCATCCTA
GGAATACACATATAGCTTCAACAGAGTAGGCACTTGTTACATGTAATAATTTACAAGGTT
TGATTCTGTCAATGGCTATTTGCCAGACTATTTTATTCAAATATATGCTTATTATTTTCT
G