Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g01580.t01
CDS Infomation

cds chromosome:12X:6:1988366:1989856:-1 gene:VIT_06s0004g01580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGTTTATTTTATCTGCTGCAGACATATCTTCCAAGTGAAACACCAGGGCCCCTACGC
AAGTACAGAGAAGGTGAACTGGTGAATCTGAGGGGAGATGGAACCGGAGAGCTTAAGGAA
TGGGATCGAGTGTATGACTATGCTTACTATAATGATTTGGGGAATCCAGACAGGGATCTC
AAATACACCCGCCCTGTGCTGGGAGGATCTGCGGAGTATCCTTATCCCAGGAGGGGAAGA
ACTGGTAGACCACCATCTGAAAAAGATCCCAACACCGAGAGCATATTACCACTTCTGATG
AGCTTAAACATATATGTTCCAAGAGATGAACGATTTGGTCACCTCAAGATGTTAGACTTC
CTGGCTTATGCCCTGAAATCCATAGTTCAATTCCTTCTCCCTGAGTTTGAGGCTCTATGT
GACAGCACCCCCAATGAGTTTGACAGCTTCCAAGATGTATTAGACCTCTACGAAGGAGGA
ATCAAGGTCCCAGAGGGCACTTTACTTGACAAAATTAAGGACAACATCCCTCTTGAGATG
CTCAAGGAACTTGTTCGTACTGATGGGGAACATCTCTTCAAGTTCCCAATGCCCCAAGTC
ATCAAAGAGGATAAGTCTGCATGGAGGACTGATGAAGAATTTGCTAGAGAAATGCTGGCT
GGACTCAACCCTGTTGTCATCCGTCTACTCCAAGAGTTTCCTCCAAAAAGCAAGCTGGAT
CTTGAAGTTTATGGCAACCAAAACAGTTCAATAACCAAAGAACACATAGAGAATCACCTA
GATGGCCTTACTATAAACAAGGCAATGAAGAAGAAGAGGCTATTCATATTAGATGACCAT
GATGTTTTCATGCCATACCGGAGGAGGATAAACACAACTTCCATGAAAACTTATGCCTCA
AGGACTCTCCTCTTCCTGAAAGACGACAGAACTTTGAAGCCCCTAGCGATTGAATTGAGC
CTACCACATCCCAATGGCATGGTTCAAAGTCGCGGTATCGGTCACTGA

Peptide Sequence

PEP ID

VIT_06s0004g01580.t01
PEP Infomation

pep chromosome:12X:6:1988366:1989856:-1 gene:VIT_06s0004g01580 transcript:VIT_06s0004g01580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MCLFYLLQTYLPSETPGPLRKYREGELVNLRGDGTGELKEWDRVYDYAYYNDLGNPDRDL
KYTRPVLGGSAEYPYPRRGRTGRPPSEKDPNTESILPLLMSLNIYVPRDERFGHLKMLDF
LAYALKSIVQFLLPEFEALCDSTPNEFDSFQDVLDLYEGGIKVPEGTLLDKIKDNIPLEM
LKELVRTDGEHLFKFPMPQVIKEDKSAWRTDEEFAREMLAGLNPVVIRLLQEFPPKSKLD
LEVYGNQNSSITKEHIENHLDGLTINKAMKKKRLFILDDHDVFMPYRRRINTTSMKTYAS
RTLLFLKDDRTLKPLAIELSLPHPNGMVQSRGIGH

Transcript Sequence

Transcript ID

VIT_06s0004g01580.t01
Transcript Infomation

cdna chromosome:12X:6:1988366:1989856:-1 gene:VIT_06s0004g01580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTAGGCAAGGAGAATTGTCTGCTAAAGGAATGTGTTTATTTTATCTGCTGCAGACATAT
CTTCCAAGTGAAACACCAGGGCCCCTACGCAAGTACAGAGAAGGTGAACTGGTGAATCTG
AGGGGAGATGGAACCGGAGAGCTTAAGGAATGGGATCGAGTGTATGACTATGCTTACTAT
AATGATTTGGGGAATCCAGACAGGGATCTCAAATACACCCGCCCTGTGCTGGGAGGATCT
GCGGAGTATCCTTATCCCAGGAGGGGAAGAACTGGTAGACCACCATCTGAAAAAGATCCC
AACACCGAGAGCATATTACCACTTCTGATGAGCTTAAACATATATGTTCCAAGAGATGAA
CGATTTGGTCACCTCAAGATGTTAGACTTCCTGGCTTATGCCCTGAAATCCATAGTTCAA
TTCCTTCTCCCTGAGTTTGAGGCTCTATGTGACAGCACCCCCAATGAGTTTGACAGCTTC
CAAGATGTATTAGACCTCTACGAAGGAGGAATCAAGGTCCCAGAGGGCACTTTACTTGAC
AAAATTAAGGACAACATCCCTCTTGAGATGCTCAAGGAACTTGTTCGTACTGATGGGGAA
CATCTCTTCAAGTTCCCAATGCCCCAAGTCATCAAAGAGGATAAGTCTGCATGGAGGACT
GATGAAGAATTTGCTAGAGAAATGCTGGCTGGACTCAACCCTGTTGTCATCCGTCTACTC
CAAGAGTTTCCTCCAAAAAGCAAGCTGGATCTTGAAGTTTATGGCAACCAAAACAGTTCA
ATAACCAAAGAACACATAGAGAATCACCTAGATGGCCTTACTATAAACAAGGCAATGAAG
AAGAAGAGGCTATTCATATTAGATGACCATGATGTTTTCATGCCATACCGGAGGAGGATA
AACACAACTTCCATGAAAACTTATGCCTCAAGGACTCTCCTCTTCCTGAAAGACGACAGA
ACTTTGAAGCCCCTAGCGATTGAATTGAGCCTACCACATCCCAATGGCATGGTTCAAAGT
CGCGGTATCGGTCACTGA