Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g01540.t01
CDS Infomation

cds chromosome:12X:6:1905313:1913636:1 gene:VIT_06s0004g01540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAACCCACCTCAGATCGCCGTTCTTGGTGGTGGTATCTTTGTAAGGACTCAGTAC
ATTCCCAGATTGGCTGAGATCTCTCATCTCTTTGTTCTCAAAGCTATTTGGAGCCGTTCC
CAGGAATCTGCCAATATCACTGTTGAGCTTGCCCGGAAAAATTTTCCTGATGTAGAATGT
AAGTGGGGTGAAGATGGTCTTGATGAGATTATTAATGATTCTTCTATAACTGGGGTTGCA
GTGGTTCTTGCCGGACAGTTTCAGGTGGAGATGTCACTTAGACTGCTAAAGGCAGGGAAG
CATGTTCTTCAAGAGAAACCGGCAGCAGCTTCTATTAGTGAGGCAGAAACTGCACTCTCA
CACTACAATTCAATTTGTGCCAGCATCCCTGGCCAACCTATTTGGGCTGTTGCAGAGAAT
TACCGGTTTGAACCTGCTTTTGTTGAGTGCAAGAAACTAATGGAAGAGATTGGAGATATG
ATGAGCATCCAAGTTATTGTTGAGGGATCAATGAACAGTTCAAACCCTTATTTCTCAAGT
TCTTGGAGACGCAATTTTACAGGTGGTTTCATTCTGGATATGGGGGTACATTTCATTGCA
GGATTGAGGATGCTTGTTGGATGTGAAATTGCCTCAGTTTCGGCTATCACTTCTCATGTA
GATACGATGCTGCCTCCACCGGATAACATATCCTCTGTCTTTCAACTGGAGAATGGATGT
TCTGGTGTCTTTGTAATGGTAGTTTCCACGAGGGCTCCTAAGATATTCTGGCGAGTTGTT
GGCTTAAAAGGAACACTGCAACTTGAGCGAGGGAACAAAGAGGGAAGTCATGGTTACCAG
TTTTCATTTCATGGTGCTGATGGGCAATGCAAAAGCTCCTTCTACCCGTTCAGTGGGGTG
ACTGAGGAATTAAAAACTTTTATACATGACATTTCACAGGCCACCCTTAAGAAGGGAAGT
AGCTATGAAGCCGAAACCCGCCTCTCCTTTGTTGAAGGTGCCCGGGATGTTGCTATTCTA
GATGCAATGCTTGAATCTGGGATGAGGCAGGGAGCCCTTATTCAGGTGAAAAAGTTTTAG

Peptide Sequence

PEP ID

VIT_06s0004g01540.t01
PEP Infomation

pep chromosome:12X:6:1905313:1913636:1 gene:VIT_06s0004g01540 transcript:VIT_06s0004g01540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MENPPQIAVLGGGIFVRTQYIPRLAEISHLFVLKAIWSRSQESANITVELARKNFPDVEC
KWGEDGLDEIINDSSITGVAVVLAGQFQVEMSLRLLKAGKHVLQEKPAAASISEAETALS
HYNSICASIPGQPIWAVAENYRFEPAFVECKKLMEEIGDMMSIQVIVEGSMNSSNPYFSS
SWRRNFTGGFILDMGVHFIAGLRMLVGCEIASVSAITSHVDTMLPPPDNISSVFQLENGC
SGVFVMVVSTRAPKIFWRVVGLKGTLQLERGNKEGSHGYQFSFHGADGQCKSSFYPFSGV
TEELKTFIHDISQATLKKGSSYEAETRLSFVEGARDVAILDAMLESGMRQGALIQVKKF

Transcript Sequence

Transcript ID

VIT_06s0004g01540.t01
Transcript Infomation

cdna chromosome:12X:6:1905313:1913636:1 gene:VIT_06s0004g01540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAAAATTCAGATTATTTACAGAACTGATCATTTCACCAATCACAAGAAGTGGCTGAATC
TGAGTTTGGTGAAGGTTATTAGGAATTTGCAGAGATGGAGAACCCACCTCAGATCGCCGT
TCTTGGTGGTGGTATCTTTGTAAGGACTCAGTACATTCCCAGATTGGCTGAGATCTCTCA
TCTCTTTGTTCTCAAAGCTATTTGGAGCCGTTCCCAGGAATCTGCCAATATCACTGTTGA
GCTTGCCCGGAAAAATTTTCCTGATGTAGAATGTAAGTGGGGTGAAGATGGTCTTGATGA
GATTATTAATGATTCTTCTATAACTGGGGTTGCAGTGGTTCTTGCCGGACAGTTTCAGGT
GGAGATGTCACTTAGACTGCTAAAGGCAGGGAAGCATGTTCTTCAAGAGAAACCGGCAGC
AGCTTCTATTAGTGAGGCAGAAACTGCACTCTCACACTACAATTCAATTTGTGCCAGCAT
CCCTGGCCAACCTATTTGGGCTGTTGCAGAGAATTACCGGTTTGAACCTGCTTTTGTTGA
GTGCAAGAAACTAATGGAAGAGATTGGAGATATGATGAGCATCCAAGTTATTGTTGAGGG
ATCAATGAACAGTTCAAACCCTTATTTCTCAAGTTCTTGGAGACGCAATTTTACAGGTGG
TTTCATTCTGGATATGGGGGTACATTTCATTGCAGGATTGAGGATGCTTGTTGGATGTGA
AATTGCCTCAGTTTCGGCTATCACTTCTCATGTAGATACGATGCTGCCTCCACCGGATAA
CATATCCTCTGTCTTTCAACTGGAGAATGGATGTTCTGGTGTCTTTGTAATGGTAGTTTC
CACGAGGGCTCCTAAGATATTCTGGCGAGTTGTTGGCTTAAAAGGAACACTGCAACTTGA
GCGAGGGAACAAAGAGGGAAGTCATGGTTACCAGTTTTCATTTCATGGTGCTGATGGGCA
ATGCAAAAGCTCCTTCTACCCGTTCAGTGGGGTGACTGAGGAATTAAAAACTTTTATACA
TGACATTTCACAGGCCACCCTTAAGAAGGGAAGTAGCTATGAAGCCGAAACCCGCCTCTC
CTTTGTTGAAGGTGCCCGGGATGTTGCTATTCTAGATGCAATGCTTGAATCTGGGATGAG
GCAGGGAGCCCTTATTCAGGTGAAAAAGTTTTAGCTTATTGATGCAGATCCCTCTGTTGC
TGACATGGTTATATCAGCTATGAAGATGATTTTTTAGGTGCTTTAGAATCTCCATCCCTT
TTAAGATTAATATATGAATTCACCCTTGTTATGGATATTATTTCTTTTGCCCACTCAATC
CTATAAAGCAAAGTTGAGT