Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_06s0004g01500.t01
CDS Infomation	cds chromosome:12X:6:1860596:1868697:1 gene:VIT_06s0004g01500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6GUA5]
Sequence	ATGGCTAATTGGATCATAGATACGGGATTGGAGAAAAAACCGATTGGCCGGTATGCTCAT CGAGTAGGTCAAAAGGATGGGGAGGCTATTTACGAGTCAAATTTTGAGATTCCTGGTGAT TTTGGGGAGATAGGTGCAGTTTTAGTGCAGAATGAACTCCGCAATGAGATGTACCTCAAG TATATAGTCCTCAATGGCCTTCCCAGTGGCCCTATTGCATTCAACTGTGGTTCATGGGTT GAGTCAAAGTTTGATAACCCTGAGAAGAGGATCTTTTTCAGCAACAAGTCATGCTTACCA TTGCAAACGCCAAGAGGCCTCAAGGGTATGAGAGAAAAAGAGCTTGCAAGTTTGCGAGGT AATGGTGAAGGGGAGCGCAAGACCTCCGATAGGATCTATGATTATGGTGTTTATAATGAT CTGGGTAACCCTGATAGCAAGTCTGAATTGGGGCGACCAGTGCTTGGTGGCAGCAAGAAT TTTCCATATCCTAGGCGATGTAGAACTGGACGTCCACGGTCCAAGACTGATCCTCATTCA GAGACAAGGAGTGGCACCTTCTATGTGCCAAGGGATGAAGAATTTTCTGAGGTGAAGGAG GCTTCGTTCATAACGAAGACAGCAGACTCAGTGTTGCACGCATTAATACCTTCCCTAGAG ACATCCCTACTTGACAGTAATCTTGGATTTCCACTCTTCTCCGATATAGATCAATTATAC AAAGAAGGAATCACCATTCCCAAGCTTAAAAATCAAGGACTTTTGCGACGTGTACTGCCC AGACTAGTGAAGGCCGTTTCTGAGGCTAAAGATGATATCGTGAAATTTGACAGCCCCGCA ATGTTTCAGAGGGACAAGTTTTCTTGGTTTCGGGATGAGGAATTCTCACGCCAAACTCTA GCTGGTGTTAACCCATATAGTATAAAGTTGGTTATGGAATGGCCATTGAAGAGTGGACTG GCCCCTGATGTCTATGGCCCACCTGAATCGGCAATCACCACAGAGTTGGTTGAGCGAGAG ATAAAAGGCTTCATGACAGTAGACGAGGCATTAGAACAAAAGAAGCTATTCATCATAGAT TACCATGACTTGTTATTACCATATGTGAGCAAAGTAAGGCAGATCGAAGGGACAACACTA TATGGCTCCAGGGCACTTTTCTTCCTAACCCCTGATTGCACCTTGAAGCCTCTAGCCATC GAGCTCACTCGCCCACCAATGGATGGAAAGCCACAGTGGAAGCAAGTTTTCACGCCCAGT TTGGAAGCTACAGGTTGCTGGCTTTGGAGGTTTGCCAAAGCCCATTTCCTTGCTCATGAC TCCGGTTATCATGAGCTTGTTAGTCACTGGTTGAGAACTCACTGTGCAACAGAACCTTAC ATAATTGCAACAAATCGGCAACTCAGCGCGATGCACCCAATCTATAAGCTATTGCATCCT CATTTCCGCTATACAATGCAGATCAATGCCCTTGCTAGACAAGCCCTCATCAATGCGGAT GGGATCATTGAGACTTCATTCTCGCCCAGCAAATATTCTATGGAGCTTAGCTCTGTTGCT TATGACCAGCTGTGGCGGTTTGATAAGGAAGCATTACCAGCAGACCTAATAAACAGGGGA ATTGCTGTTGAGGATCCAACTGCTCCCCATGGCCTAAAGCTACTGATCGAAGACTATCCT TTTGCCAACGATGGTCTCATACTATGGGATGCCTTAAAACAATGGGTTGCAGACTATGTC AATTACTACTACAAGGACGCGAGCATGGTACAGTCTGATCCAGAGCTTCAAGCATGGTGG ACGGAAATCCGAACGAAAGGTCATGAGGACAAAAAAGATGAACCATGGTGGCCAGTCCTC AAAACACCAGAAGACCTCATTGGAATAATCACAACTATAGTGTGGGTGGCCTCCGCTCAC GACTCAGCCGTCAATTTTGGACAATATGCTTTTGCTGGTTACTTCCCCAATAGGCCTACC ATTGCTAGAACCAATATGCCCTCTGAAGACCCAACAAGAGAAGGATGGAAACGATTTTTG GACAATCCCGAATTTGAACTCTTGGTATGCTTCCCTTCACAGATTCAAGCAACAAAAGTT ATGGCTATTTTAGATGTGTTATCGAATCATTCTCCAGATGAGGAGTATCTAGGGGAGCAC ATGGAGCCAGCATGGGGTGAAGAACCAGTTATAAAGGAAGCATTTGAAAGGTTTTCTGCG AAGTTAAAGGAACTCGGAGTAATTATTGATTCTAGGAATGCAGACGATAGTTTGAAGAAC AGAGGCGGAGCTGGGGTGGTTCCATATGAGCTCTTGAAGCCATTTTCTGAAGCTGGGGTG ACAGGAAAGGGAGTTCCATACAGCATCTCCATCTGA

Peptide Sequence

PEP ID	VIT_06s0004g01500.t01
PEP Infomation	pep chromosome:12X:6:1860596:1868697:1 gene:VIT_06s0004g01500 transcript:VIT_06s0004g01500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6GUA5]
Sequence	MANWIIDTGLEKKPIGRYAHRVGQKDGEAIYESNFEIPGDFGEIGAVLVQNELRNEMYLK YIVLNGLPSGPIAFNCGSWVESKFDNPEKRIFFSNKSCLPLQTPRGLKGMREKELASLRG NGEGERKTSDRIYDYGVYNDLGNPDSKSELGRPVLGGSKNFPYPRRCRTGRPRSKTDPHS ETRSGTFYVPRDEEFSEVKEASFITKTADSVLHALIPSLETSLLDSNLGFPLFSDIDQLY KEGITIPKLKNQGLLRRVLPRLVKAVSEAKDDIVKFDSPAMFQRDKFSWFRDEEFSRQTL AGVNPYSIKLVMEWPLKSGLAPDVYGPPESAITTELVEREIKGFMTVDEALEQKKLFIID YHDLLLPYVSKVRQIEGTTLYGSRALFFLTPDCTLKPLAIELTRPPMDGKPQWKQVFTPS LEATGCWLWRFAKAHFLAHDSGYHELVSHWLRTHCATEPYIIATNRQLSAMHPIYKLLHP HFRYTMQINALARQALINADGIIETSFSPSKYSMELSSVAYDQLWRFDKEALPADLINRG IAVEDPTAPHGLKLLIEDYPFANDGLILWDALKQWVADYVNYYYKDASMVQSDPELQAWW TEIRTKGHEDKKDEPWWPVLKTPEDLIGIITTIVWVASAHDSAVNFGQYAFAGYFPNRPT IARTNMPSEDPTREGWKRFLDNPEFELLVCFPSQIQATKVMAILDVLSNHSPDEEYLGEH MEPAWGEEPVIKEAFERFSAKLKELGVIIDSRNADDSLKNRGGAGVVPYELLKPFSEAGV TGKGVPYSISI

Transcript Sequence

Transcript ID	VIT_06s0004g01500.t01
Transcript Infomation	cdna chromosome:12X:6:1860596:1868697:1 gene:VIT_06s0004g01500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6GUA5]
Sequence	ATGGCTAATTGGATCATAGATACGGGATTGGAGAAAAAACCGATTGGCCGGTATGCTCAT CGAGTAGGTCAAAAGGATGGGGAGGCTATTTACGAGTCAAATTTTGAGATTCCTGGTGAT TTTGGGGAGATAGGTGCAGTTTTAGTGCAGAATGAACTCCGCAATGAGATGTACCTCAAG TATATAGTCCTCAATGGCCTTCCCAGTGGCCCTATTGCATTCAACTGTGGTTCATGGGTT GAGTCAAAGTTTGATAACCCTGAGAAGAGGATCTTTTTCAGCAACAAGTCATGCTTACCA TTGCAAACGCCAAGAGGCCTCAAGGGTATGAGAGAAAAAGAGCTTGCAAGTTTGCGAGGT AATGGTGAAGGGGAGCGCAAGACCTCCGATAGGATCTATGATTATGGTGTTTATAATGAT CTGGGTAACCCTGATAGCAAGTCTGAATTGGGGCGACCAGTGCTTGGTGGCAGCAAGAAT TTTCCATATCCTAGGCGATGTAGAACTGGACGTCCACGGTCCAAGACTGATCCTCATTCA GAGACAAGGAGTGGCACCTTCTATGTGCCAAGGGATGAAGAATTTTCTGAGGTGAAGGAG GCTTCGTTCATAACGAAGACAGCAGACTCAGTGTTGCACGCATTAATACCTTCCCTAGAG ACATCCCTACTTGACAGTAATCTTGGATTTCCACTCTTCTCCGATATAGATCAATTATAC AAAGAAGGAATCACCATTCCCAAGCTTAAAAATCAAGGACTTTTGCGACGTGTACTGCCC AGACTAGTGAAGGCCGTTTCTGAGGCTAAAGATGATATCGTGAAATTTGACAGCCCCGCA ATGTTTCAGAGGGACAAGTTTTCTTGGTTTCGGGATGAGGAATTCTCACGCCAAACTCTA GCTGGTGTTAACCCATATAGTATAAAGTTGGTTATGGAATGGCCATTGAAGAGTGGACTG GCCCCTGATGTCTATGGCCCACCTGAATCGGCAATCACCACAGAGTTGGTTGAGCGAGAG ATAAAAGGCTTCATGACAGTAGACGAGGCATTAGAACAAAAGAAGCTATTCATCATAGAT TACCATGACTTGTTATTACCATATGTGAGCAAAGTAAGGCAGATCGAAGGGACAACACTA TATGGCTCCAGGGCACTTTTCTTCCTAACCCCTGATTGCACCTTGAAGCCTCTAGCCATC GAGCTCACTCGCCCACCAATGGATGGAAAGCCACAGTGGAAGCAAGTTTTCACGCCCAGT TTGGAAGCTACAGGTTGCTGGCTTTGGAGGTTTGCCAAAGCCCATTTCCTTGCTCATGAC TCCGGTTATCATGAGCTTGTTAGTCACTGGTTGAGAACTCACTGTGCAACAGAACCTTAC ATAATTGCAACAAATCGGCAACTCAGCGCGATGCACCCAATCTATAAGCTATTGCATCCT CATTTCCGCTATACAATGCAGATCAATGCCCTTGCTAGACAAGCCCTCATCAATGCGGAT GGGATCATTGAGACTTCATTCTCGCCCAGCAAATATTCTATGGAGCTTAGCTCTGTTGCT TATGACCAGCTGTGGCGGTTTGATAAGGAAGCATTACCAGCAGACCTAATAAACAGGGGA ATTGCTGTTGAGGATCCAACTGCTCCCCATGGCCTAAAGCTACTGATCGAAGACTATCCT TTTGCCAACGATGGTCTCATACTATGGGATGCCTTAAAACAATGGGTTGCAGACTATGTC AATTACTACTACAAGGACGCGAGCATGGTACAGTCTGATCCAGAGCTTCAAGCATGGTGG ACGGAAATCCGAACGAAAGGTCATGAGGACAAAAAAGATGAACCATGGTGGCCAGTCCTC AAAACACCAGAAGACCTCATTGGAATAATCACAACTATAGTGTGGGTGGCCTCCGCTCAC GACTCAGCCGTCAATTTTGGACAATATGCTTTTGCTGGTTACTTCCCCAATAGGCCTACC ATTGCTAGAACCAATATGCCCTCTGAAGACCCAACAAGAGAAGGATGGAAACGATTTTTG GACAATCCCGAATTTGAACTCTTGGTATGCTTCCCTTCACAGATTCAAGCAACAAAAGTT ATGGCTATTTTAGATGTGTTATCGAATCATTCTCCAGATGAGGAGTATCTAGGGGAGCAC ATGGAGCCAGCATGGGGTGAAGAACCAGTTATAAAGGAAGCATTTGAAAGGTTTTCTGCG AAGTTAAAGGAACTCGGAGTAATTATTGATTCTAGGAATGCAGACGATAGTTTGAAGAAC AGAGGCGGAGCTGGGGTGGTTCCATATGAGCTCTTGAAGCCATTTTCTGAAGCTGGGGTG ACAGGAAAGGGAGTTCCATACAGCATCTCCATCTGAAGT