Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_06s0004g01470.t01
CDS Infomation	cds chromosome:12X:6:1819011:1825968:1 gene:VIT_06s0004g01470 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6GUA7]
Sequence	ATGGCAACTCAGAATTTAGATATGCTCAAGACTCAGATCCACCGGCCAGACAATGCCCGG ACGTTCTTCTTACTGAACAAACCATGCTTCCCCAGCCACAGTTTTGATTCATTTTCCTTC CGGCCAGGGCCACAACTCCAGAAAAAGTATAGGAATATTAGGGCTGGTTATGTCCTTAAC AATGCTAAAGCTGTAGCAGGTGGAACCCGCATGTCCACTTCTGTTAAGGCAACTGTTACC GTGAAATTAAGCGATGGAGGGTGCTTCTTCAACTTGGTAGGGTTGAGCCATGGGTCCGAT GATATATTGGACTTACTTGGTAAATCACTCCTTTTAGAGATTGTTAGTGCAGAGCTTGAT CCTAAGACGGGATTAGAGAAGAAACCAATTAGCGGGTATGCTCGCCGAACAGGCCAAAAG GATGGGGAGGTGATTTACGAGTCAGAGTTCGTGATTCCTGGTGACTTTGGGGAGATAGGT GCAGTTCTAGTCGAGAATGAACACAAGAATGAAATGTACCTCAAGCATATAGTCCTCAAT GGCCTCCCAAATGGCCCTATTGAGTTCAACTGTGATTCATGGGTTGAGCCAAAGTTTGAT AAGCCTGAGAAGAGGGTCTTTTTCACCTTCAAGTCATACTTACCATCACAAACACCAAGA GGCCTCAACAGTTTAAGAGAAAAAGATCTTGTAAGTTTACGAGGAAATGGTAAAGGCGAA CGCAAGACTTCCGATAGAATCTATGATTATGATGTGTATAATGATCTGGGTGACCCTGAT AGCAAGTCTGAATTGGCCCGACCAGTGCTTGGTGGTAGCAAGAAGTACCCATACCCTAGG CGATGTAGGACGGGATGTCCACGGTCCAAGATTGATCCCCTTTCGGAGACAAGGACTGGC ACCTTCTATGTGCCAAGGGATGAAGAATTTTCTGAGGTGAAGCAGAACTCATTCATAACA AAGACAGCAGAGTCAGTGTTGGACGCGTTATTACCATCCCTAAAGGCAGTCCTACTTGAC GACCCTGGTCTTGGATTTCAACACTTCTCAGATATAGACCAATTATACAATCAAGGAATG CCCATTCCTAAGGTTAAAAATCAAGGACCTTTGCAAAGTATAGTGCTGAGACTAGTGAAG GCCATTGAAGATGCAGACGATGTCGTGAAATTTGAAACCCCTGCAATGTTTCATAAGGAC AAGTTCTCTTGGCTTCGGGATGAGGAATTCTCACGCCAAACCCTTGCTGGTGTTAACCCA TACAGTATAAAGTTAGTTACGGAATGGCCATTGAAGAGCACACTGGATCCTGATGTCTAT GGTCCACCCGAATCGGCAATCACCACAGAGTTGGTCGGGCGAGAGATAAAAGACTTCATG ACAGTAGACAAGGCATTAGAACAGAAGAAGCTATTCATCATAGATTACCATGACTTATTA TTACCATTTGTAAGCAAAGTAAGGCGGATCAAAGGGACAACACTGTATGGCTCAAGGGCA CTTTTCTTCCTAACACCTGATGGCACCTTGAAGCCTCTAGCCATCGAGCTCACTCGCCCC CCAATGGATGGAAAACCACAGTGGAACAAAGTTTTCACGCCCAGTTCGGAAGCTACAGGT TTGTGGCTTTGGAGGTTTGCCAAAGCCCATTTCCTCGCCCATGACTCCGGTTATCATGAG CTTGTTAGTCACTGGTTGAGAACTCACTGTGCGACAGAACCTTACATAATTGCAACAAAT AGGCAACTCAGTGTAATGCACCCAATCTATAGATTATTATATCCTCATTGCCGGTACACA ATGAAGATCAATGCTCTTGCCCGACAAGTTCTCATCAGTGCAGATGGGGTCATTGAGAGT TCATTCTCGCCTAGCAAATATTCTATGGAGCTTAGCTCCGTCGCTTATGACCAGCAGTGG CGGTTTGATAGGGAAGCTCTGCCAGCAGACCTAATAAATAGGGGAATTGCCATTGAGGAT CCAACTGCTCCCCATGGCCTAAAGCTACTGATCGCAGACTATCCTTTTGCCAACGACGGT CTGGTCCTATGGGATGCCTTAAAACAATGGGTTGCAGATTATGTCAATTACTACTACAAG AACGCAAGCATGGTGCAGTCTGATCCAGAGCTCCAAGCATGGTGGACAGAAATCCGAACC AAAGGTCATGAGGATAAGAAAGATGAACCATGGTGGCCAGTCCTCAAAACACCAGAAGAT CTCATCGGAATTATCACAACTATAGTGTGGGTGGCCTCTGCTCACCACTCAGCCGTCAAC TTTGGGCAATATGCTTTTGCTGGCTACTTCCCCAATAGGCCTACGATTGCGAGAATCAAC ATGCCCTGTGAAGACCCAACAAAAGAAGAATGGAAACAATATCCCGATTCTGAACTTTTG GTATGCTTCCCTTCACAGATTCAAGCAACAAAAGTTATGGCTATTTTAGATGTGTTATCG AATCATTCCCCGGATGAAGAGTATCTAGGGAAGCATATGGAGCCAACATGGGGTAAAGAA CCAGCAATAAAGAAAGCATTTGAAAGGTTTGCAGAGAGATTAAAGGAACTCGAAAAAATT ATTAATGCTAGGAATAAAGACAATAGTTTGAAGAACAGAGGCGGAGCTGGGGTGGTTCCA TATGATGTTTTGAAGCCATTTTCTAAACAGGGGGTGACAGGAGAAGGAGTTCCATACAGC ATCTCCATCTGA

Peptide Sequence

PEP ID	VIT_06s0004g01470.t01
PEP Infomation	pep chromosome:12X:6:1819011:1825968:1 gene:VIT_06s0004g01470 transcript:VIT_06s0004g01470.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6GUA7]
Sequence	MATQNLDMLKTQIHRPDNARTFFLLNKPCFPSHSFDSFSFRPGPQLQKKYRNIRAGYVLN NAKAVAGGTRMSTSVKATVTVKLSDGGCFFNLVGLSHGSDDILDLLGKSLLLEIVSAELD PKTGLEKKPISGYARRTGQKDGEVIYESEFVIPGDFGEIGAVLVENEHKNEMYLKHIVLN GLPNGPIEFNCDSWVEPKFDKPEKRVFFTFKSYLPSQTPRGLNSLREKDLVSLRGNGKGE RKTSDRIYDYDVYNDLGDPDSKSELARPVLGGSKKYPYPRRCRTGCPRSKIDPLSETRTG TFYVPRDEEFSEVKQNSFITKTAESVLDALLPSLKAVLLDDPGLGFQHFSDIDQLYNQGM PIPKVKNQGPLQSIVLRLVKAIEDADDVVKFETPAMFHKDKFSWLRDEEFSRQTLAGVNP YSIKLVTEWPLKSTLDPDVYGPPESAITTELVGREIKDFMTVDKALEQKKLFIIDYHDLL LPFVSKVRRIKGTTLYGSRALFFLTPDGTLKPLAIELTRPPMDGKPQWNKVFTPSSEATG LWLWRFAKAHFLAHDSGYHELVSHWLRTHCATEPYIIATNRQLSVMHPIYRLLYPHCRYT MKINALARQVLISADGVIESSFSPSKYSMELSSVAYDQQWRFDREALPADLINRGIAIED PTAPHGLKLLIADYPFANDGLVLWDALKQWVADYVNYYYKNASMVQSDPELQAWWTEIRT KGHEDKKDEPWWPVLKTPEDLIGIITTIVWVASAHHSAVNFGQYAFAGYFPNRPTIARIN MPCEDPTKEEWKQYPDSELLVCFPSQIQATKVMAILDVLSNHSPDEEYLGKHMEPTWGKE PAIKKAFERFAERLKELEKIINARNKDNSLKNRGGAGVVPYDVLKPFSKQGVTGEGVPYS ISI

Transcript Sequence

Transcript ID	VIT_06s0004g01470.t01
Transcript Infomation	cdna chromosome:12X:6:1819011:1825968:1 gene:VIT_06s0004g01470 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6GUA7]
Sequence	CTATGGCAACTCAGAATTTAGATATGCTCAAGACTCAGATCCACCGGCCAGACAATGCCC GGACGTTCTTCTTACTGAACAAACCATGCTTCCCCAGCCACAGTTTTGATTCATTTTCCT TCCGGCCAGGGCCACAACTCCAGAAAAAGTATAGGAATATTAGGGCTGGTTATGTCCTTA ACAATGCTAAAGCTGTAGCAGGTGGAACCCGCATGTCCACTTCTGTTAAGGCAACTGTTA CCGTGAAATTAAGCGATGGAGGGTGCTTCTTCAACTTGGTAGGGTTGAGCCATGGGTCCG ATGATATATTGGACTTACTTGGTAAATCACTCCTTTTAGAGATTGTTAGTGCAGAGCTTG ATCCTAAGACGGGATTAGAGAAGAAACCAATTAGCGGGTATGCTCGCCGAACAGGCCAAA AGGATGGGGAGGTGATTTACGAGTCAGAGTTCGTGATTCCTGGTGACTTTGGGGAGATAG GTGCAGTTCTAGTCGAGAATGAACACAAGAATGAAATGTACCTCAAGCATATAGTCCTCA ATGGCCTCCCAAATGGCCCTATTGAGTTCAACTGTGATTCATGGGTTGAGCCAAAGTTTG ATAAGCCTGAGAAGAGGGTCTTTTTCACCTTCAAGTCATACTTACCATCACAAACACCAA GAGGCCTCAACAGTTTAAGAGAAAAAGATCTTGTAAGTTTACGAGGAAATGGTAAAGGCG AACGCAAGACTTCCGATAGAATCTATGATTATGATGTGTATAATGATCTGGGTGACCCTG ATAGCAAGTCTGAATTGGCCCGACCAGTGCTTGGTGGTAGCAAGAAGTACCCATACCCTA GGCGATGTAGGACGGGATGTCCACGGTCCAAGATTGATCCCCTTTCGGAGACAAGGACTG GCACCTTCTATGTGCCAAGGGATGAAGAATTTTCTGAGGTGAAGCAGAACTCATTCATAA CAAAGACAGCAGAGTCAGTGTTGGACGCGTTATTACCATCCCTAAAGGCAGTCCTACTTG ACGACCCTGGTCTTGGATTTCAACACTTCTCAGATATAGACCAATTATACAATCAAGGAA TGCCCATTCCTAAGGTTAAAAATCAAGGACCTTTGCAAAGTATAGTGCTGAGACTAGTGA AGGCCATTGAAGATGCAGACGATGTCGTGAAATTTGAAACCCCTGCAATGTTTCATAAGG ACAAGTTCTCTTGGCTTCGGGATGAGGAATTCTCACGCCAAACCCTTGCTGGTGTTAACC CATACAGTATAAAGTTAGTTACGGAATGGCCATTGAAGAGCACACTGGATCCTGATGTCT ATGGTCCACCCGAATCGGCAATCACCACAGAGTTGGTCGGGCGAGAGATAAAAGACTTCA TGACAGTAGACAAGGCATTAGAACAGAAGAAGCTATTCATCATAGATTACCATGACTTAT TATTACCATTTGTAAGCAAAGTAAGGCGGATCAAAGGGACAACACTGTATGGCTCAAGGG CACTTTTCTTCCTAACACCTGATGGCACCTTGAAGCCTCTAGCCATCGAGCTCACTCGCC CCCCAATGGATGGAAAACCACAGTGGAACAAAGTTTTCACGCCCAGTTCGGAAGCTACAG GTTTGTGGCTTTGGAGGTTTGCCAAAGCCCATTTCCTCGCCCATGACTCCGGTTATCATG AGCTTGTTAGTCACTGGTTGAGAACTCACTGTGCGACAGAACCTTACATAATTGCAACAA ATAGGCAACTCAGTGTAATGCACCCAATCTATAGATTATTATATCCTCATTGCCGGTACA CAATGAAGATCAATGCTCTTGCCCGACAAGTTCTCATCAGTGCAGATGGGGTCATTGAGA GTTCATTCTCGCCTAGCAAATATTCTATGGAGCTTAGCTCCGTCGCTTATGACCAGCAGT GGCGGTTTGATAGGGAAGCTCTGCCAGCAGACCTAATAAATAGGGGAATTGCCATTGAGG ATCCAACTGCTCCCCATGGCCTAAAGCTACTGATCGCAGACTATCCTTTTGCCAACGACG GTCTGGTCCTATGGGATGCCTTAAAACAATGGGTTGCAGATTATGTCAATTACTACTACA AGAACGCAAGCATGGTGCAGTCTGATCCAGAGCTCCAAGCATGGTGGACAGAAATCCGAA CCAAAGGTCATGAGGATAAGAAAGATGAACCATGGTGGCCAGTCCTCAAAACACCAGAAG ATCTCATCGGAATTATCACAACTATAGTGTGGGTGGCCTCTGCTCACCACTCAGCCGTCA ACTTTGGGCAATATGCTTTTGCTGGCTACTTCCCCAATAGGCCTACGATTGCGAGAATCA ACATGCCCTGTGAAGACCCAACAAAAGAAGAATGGAAACAATATCCCGATTCTGAACTTT TGGTATGCTTCCCTTCACAGATTCAAGCAACAAAAGTTATGGCTATTTTAGATGTGTTAT CGAATCATTCCCCGGATGAAGAGTATCTAGGGAAGCATATGGAGCCAACATGGGGTAAAG AACCAGCAATAAAGAAAGCATTTGAAAGGTTTGCAGAGAGATTAAAGGAACTCGAAAAAA TTATTAATGCTAGGAATAAAGACAATAGTTTGAAGAACAGAGGCGGAGCTGGGGTGGTTC CATATGATGTTTTGAAGCCATTTTCTAAACAGGGGGTGACAGGAGAAGGAGTTCCATACA GCATCTCCATCTGAAGTTACAATATATATGGAAGAGATAATAATTGATGTAACATGTGAA CTTTGTGC