Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g01360.t01
CDS Infomation

cds chromosome:12X:6:1609324:1614951:1 gene:VIT_06s0004g01360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGCGTCGCCTTCGGCCGATGCTGCCGCGACGGTGGAGTCTTTGGCGGACGGGCTG
AGGAATCAGAGGCTGGGGAGCGAGAATAGGGTTTTGTTGAGGCTTGAGGATCTGAATTGG
GACCATTCGTTTGTTCATGAGTTGCCTGGTGATCCGAGGACCGATCCTATTCCGCGGCAG
GTATTGCATGCTTGTTATACAAAAATATCCCCATCAGCTGAAGTGGAGAATCCTCAGCTT
GTTGCATGGTTAGAATCAGTTGCTGAGTTGCTTGATTTGGATCCTAAAGAATTTGAACGC
CCAGATTTCCCACTAATTTTTTCTGGGGCATCCCTTCTTGTGGGAGGGTTGCCCTATGCT
CAATGCTATGGAGGTCATCAATTTGGCATGTGGGCTGGTCAGTTAGGCGATGGTCGGGCC
ATAACACTAGGAGAGCTTCTGAATTCCAAGTCCGAACGATGGGAATTGCAGCTGAAAGGT
GCTGGTAGGACTCCATACAGCCGATTTGCAGATGGCCTTGCAGTTTTACGAAGTAGCATT
CGAGAATTCCTTTGTAGCGAAGCAATGCACAGCCTTGGAATTCCAACAACACGTGCACTT
TGTCTTGTGACGACTGGGAAGTATGTCACCCGGGACATGTTTTATGATGGCAATCCAAAG
GAAGAACCTGGTGCAATTGTTTGTAGAGTTGCTCAATCCTTTTTGCGATTTGGTTCTTAC
CAAATACATGCTGCTAGAGGGAAGGAGGATCTTGGCATTGTTCGTGCTTTGGCAGACTAC
ACTATTAGGCATCACTTCCCTCATATCGAGAACATGACCAGGAGTGAGGGTTTATCTTTC
AGCACAGGAGAACAAGATGAATCAATTGTGGACTTAACTTCAAACAAGTATGCTGCTTGG
TCGGTGGAGGTGGCAGAACGTACTGCTTCCTTAGTTGCAAGCTGGCAGGGGGTTGGTTTC
ACCCATGGTGTGTTGAACACTGACAACATGAGTGTGTTGGGTCTCACCATCGACTATGGT
CCATTTGGATTTTTGGATGCTTTTGATCCCAGTTACACTCCAAATACCACAGATCTTCCA
GGTCGAAGATACTGTTTTGCAAATCAACCTGATATTGGTTTATGGAATATAGCTCAGTTC
ACATCAACCCTAATGTCTGCTGAGTTGATAAATGATAAGGAGGCAAACTATGCCATGGAA
AGATATGGAACCAAATTTATGGATGAGTATCAAGCTATAATGACCAGAAAACTTGGCCTG
CCAAAGTATAATAAACAGTTGATCAGCAAACTTCTTAACAATATGGCTGTTGATAAAGTC
GATTATACAAATTTCTTTCGCTTGCTTTCCAACATTAAAGCTGATCCAACGATTCCACAA
GACGAGTTGTTAACTCCACTGAAAGCTGTTCTGTTAGACATCGGCAAGGAACGCAAGGAG
TCTTGGATTAGCTGGGTGCAATCCTACATTCAGGAGTTGGCTGCTAGTGGAATTTCAGAT
GAGGAGAGGAAGGCCTCGATGAATTCTGTTAATCCCAAATACGTTCTCAGGAACTATCTA
TGCCAAAGTGCCATAGATGCGGCTGAACAAGGTGATTTTGGAGTGGTTCGCAGGATACTG
AAAATTATGGAACGCCCATATGACGAGCAACCAGGAATGGAGAAATACGCCCGGTTGCCC
CCAGCTTGGGCTTATCGGCCAGGTGTGTGCATGCTTTCCTGTTCTTCATGA

Peptide Sequence

PEP ID

VIT_06s0004g01360.t01
PEP Infomation

pep chromosome:12X:6:1609324:1614951:1 gene:VIT_06s0004g01360 transcript:VIT_06s0004g01360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEASPSADAAATVESLADGLRNQRLGSENRVLLRLEDLNWDHSFVHELPGDPRTDPIPRQ
VLHACYTKISPSAEVENPQLVAWLESVAELLDLDPKEFERPDFPLIFSGASLLVGGLPYA
QCYGGHQFGMWAGQLGDGRAITLGELLNSKSERWELQLKGAGRTPYSRFADGLAVLRSSI
REFLCSEAMHSLGIPTTRALCLVTTGKYVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSY
QIHAARGKEDLGIVRALADYTIRHHFPHIENMTRSEGLSFSTGEQDESIVDLTSNKYAAW
SVEVAERTASLVASWQGVGFTHGVLNTDNMSVLGLTIDYGPFGFLDAFDPSYTPNTTDLP
GRRYCFANQPDIGLWNIAQFTSTLMSAELINDKEANYAMERYGTKFMDEYQAIMTRKLGL
PKYNKQLISKLLNNMAVDKVDYTNFFRLLSNIKADPTIPQDELLTPLKAVLLDIGKERKE
SWISWVQSYIQELAASGISDEERKASMNSVNPKYVLRNYLCQSAIDAAEQGDFGVVRRIL
KIMERPYDEQPGMEKYARLPPAWAYRPGVCMLSCSS

Transcript Sequence

Transcript ID

VIT_06s0004g01360.t01
Transcript Infomation

cdna chromosome:12X:6:1609324:1614951:1 gene:VIT_06s0004g01360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGAAAAAAAGGGAGAAGAGTCAAGCTATGCTTTCCCATTTATCATCTGCCTCACTTCC
ACTAAAACCCTCCACCGTCACCGCCACCGCCTTCCTCCGCCTATCCTCCCGCAACCTCCA
CTTCTCTTATTCCTCCTGCCCCATTTTTTCTCCTTTTTTCCGCTCCCATCCCTCCCTTTC
CTCCAAACTTTCCCGTTCTTTTCATTTCCGCCCCGGTGTTTCGTCGGAATCTGCTTTCTC
CCCCTCCAGATCCATGGAGGCGTCGCCTTCGGCCGATGCTGCCGCGACGGTGGAGTCTTT
GGCGGACGGGCTGAGGAATCAGAGGCTGGGGAGCGAGAATAGGGTTTTGTTGAGGCTTGA
GGATCTGAATTGGGACCATTCGTTTGTTCATGAGTTGCCTGGTGATCCGAGGACCGATCC
TATTCCGCGGCAGGTATTGCATGCTTGTTATACAAAAATATCCCCATCAGCTGAAGTGGA
GAATCCTCAGCTTGTTGCATGGTTAGAATCAGTTGCTGAGTTGCTTGATTTGGATCCTAA
AGAATTTGAACGCCCAGATTTCCCACTAATTTTTTCTGGGGCATCCCTTCTTGTGGGAGG
GTTGCCCTATGCTCAATGCTATGGAGGTCATCAATTTGGCATGTGGGCTGGTCAGTTAGG
CGATGGTCGGGCCATAACACTAGGAGAGCTTCTGAATTCCAAGTCCGAACGATGGGAATT
GCAGCTGAAAGGTGCTGGTAGGACTCCATACAGCCGATTTGCAGATGGCCTTGCAGTTTT
ACGAAGTAGCATTCGAGAATTCCTTTGTAGCGAAGCAATGCACAGCCTTGGAATTCCAAC
AACACGTGCACTTTGTCTTGTGACGACTGGGAAGTATGTCACCCGGGACATGTTTTATGA
TGGCAATCCAAAGGAAGAACCTGGTGCAATTGTTTGTAGAGTTGCTCAATCCTTTTTGCG
ATTTGGTTCTTACCAAATACATGCTGCTAGAGGGAAGGAGGATCTTGGCATTGTTCGTGC
TTTGGCAGACTACACTATTAGGCATCACTTCCCTCATATCGAGAACATGACCAGGAGTGA
GGGTTTATCTTTCAGCACAGGAGAACAAGATGAATCAATTGTGGACTTAACTTCAAACAA
GTATGCTGCTTGGTCGGTGGAGGTGGCAGAACGTACTGCTTCCTTAGTTGCAAGCTGGCA
GGGGGTTGGTTTCACCCATGGTGTGTTGAACACTGACAACATGAGTGTGTTGGGTCTCAC
CATCGACTATGGTCCATTTGGATTTTTGGATGCTTTTGATCCCAGTTACACTCCAAATAC
CACAGATCTTCCAGGTCGAAGATACTGTTTTGCAAATCAACCTGATATTGGTTTATGGAA
TATAGCTCAGTTCACATCAACCCTAATGTCTGCTGAGTTGATAAATGATAAGGAGGCAAA
CTATGCCATGGAAAGATATGGAACCAAATTTATGGATGAGTATCAAGCTATAATGACCAG
AAAACTTGGCCTGCCAAAGTATAATAAACAGTTGATCAGCAAACTTCTTAACAATATGGC
TGTTGATAAAGTCGATTATACAAATTTCTTTCGCTTGCTTTCCAACATTAAAGCTGATCC
AACGATTCCACAAGACGAGTTGTTAACTCCACTGAAAGCTGTTCTGTTAGACATCGGCAA
GGAACGCAAGGAGTCTTGGATTAGCTGGGTGCAATCCTACATTCAGGAGTTGGCTGCTAG
TGGAATTTCAGATGAGGAGAGGAAGGCCTCGATGAATTCTGTTAATCCCAAATACGTTCT
CAGGAACTATCTATGCCAAAGTGCCATAGATGCGGCTGAACAAGGTGATTTTGGAGTGGT
TCGCAGGATACTGAAAATTATGGAACGCCCATATGACGAGCAACCAGGAATGGAGAAATA
CGCCCGGTTGCCCCCAGCTTGGGCTTATCGGCCAGGTGTGTGCATGCTTTCCTGTTCTTC
ATGAACTGCTCGCTACAATTACACAAATACCAAAAACAAAAAAAAAAGGAAAAAAGGAAT
GTAGGTTGCTGTATATAACAGTTAAATCGAAGGTTTTTTCTCATGTAATAAACCGCAGTT
GTATACATTCCACTGTCTTCTTTATTCAGTGAATGCATTTTGTGTAATACAGTTGGAAGC
AGATACATATGCTCTCTTTTAAGTTAATTATTTTGA