Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g01220.t01
CDS Infomation

cds chromosome:12X:6:1415130:1421640:-1 gene:VIT_06s0004g01220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGATTGAGATCGCAAATCTAGGGTTTCAGTTGAATCCACTTCCCACATTCTCACCA
GTCTTCGTTCCAAGAACGGTCCTCAAATCCTCTAAACGGTGTCGTTTCGATCGGAGAAAC
CTTCTTCTTCTTCGCCCTCCGGCCTCGTCTCTCGTCGACGAACAGCCACAGGTCTCCTTC
ACGGAACCGGAGAATCGCCTTATCGATTCACTCGTCGGAATACAAGGTCGCGGTCGCTCG
GCGTCTCCTCAGCAGCTCAGTGATGTTGAAAGTGCAGTGCAAGCTTTGGAAGGTTTAGGA
GGTGTGCCTGATCCGACAAGCTCTAGTTTAATTGAAGGTCGATGGCAGTTAATGTTCACA
ACAAGACCCGGAACTGCATCCCCAATTCAGAGAACATTTGTGGGAGTTGACAACTTCAAT
GTCTTTCAAGAGGTATACCTTCGGACAGATGACCCACGTGTGTCCAATATCGTAAGATTC
TCTGAAGCAATAGGCGAGCTAAAAGTAGAGGCAGCAGCATCAATTAAAGATGGAAAGCGG
ATCCTTTTCCGGTTTGATAGAGCAGCCTTTTCTTTCAAATTTTTGCCATTTAAGGTTCCA
TATCCAGTGCCGTTTAGGCTTCTAGGAGACGAAGCAAAGGGTTGGTTAGACACTACATAT
TTGTCACAATCTGGAAATCTTCGTATCTCAAGAGGAAACAAGGGCACCACGTTTGTTCTG
CAAAAGAACACTGAACCAAGACAAAGATTTCTATCAGTCATTTCCAAGGGTACAGGAGTA
ATGGAGGCAATTAATGAGTTCATCTCCCTAAATCAGAACAAGGCTACAGGTGAACCACAG
CTCTTAGAGGGAGAATGGCAAATGATTTGGAGCTCCCAGCAAGAGACAGACAGTTGGCTA
GAAAATGCTGCCAATGGCCTTATGGGGACGCAGATTGTGAAGGGTGAACAATTGAAGTTT
GTGGTGGACATTTTGCTTGGGTTCAGATTTTCCATGATCGGCACATTCGTGAAAACTGGA
GCAACCACGTATGAAGTTACAATGAATGATGCAGCCATCGTGGCTGGCCCAGTCGGGCTT
CCAATGGAAATGGAAAGCAAGTTCAACTTAGAGTTGCTATACACTGATGACAAGATTAGA
ATCACCCGAGGTTTCAGAAATATTACTTTCGTCCATTTACGTGTGGGCTGA

Peptide Sequence

PEP ID

VIT_06s0004g01220.t01
PEP Infomation

pep chromosome:12X:6:1415130:1421640:-1 gene:VIT_06s0004g01220 transcript:VIT_06s0004g01220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAIEIANLGFQLNPLPTFSPVFVPRTVLKSSKRCRFDRRNLLLLRPPASSLVDEQPQVSF
TEPENRLIDSLVGIQGRGRSASPQQLSDVESAVQALEGLGGVPDPTSSSLIEGRWQLMFT
TRPGTASPIQRTFVGVDNFNVFQEVYLRTDDPRVSNIVRFSEAIGELKVEAAASIKDGKR
ILFRFDRAAFSFKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSQSGNLRISRGNKGTTFVL
QKNTEPRQRFLSVISKGTGVMEAINEFISLNQNKATGEPQLLEGEWQMIWSSQQETDSWL
ENAANGLMGTQIVKGEQLKFVVDILLGFRFSMIGTFVKTGATTYEVTMNDAAIVAGPVGL
PMEMESKFNLELLYTDDKIRITRGFRNITFVHLRVG

Transcript Sequence

Transcript ID

VIT_06s0004g01220.t01
Transcript Infomation

cdna chromosome:12X:6:1415130:1421640:-1 gene:VIT_06s0004g01220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGAAGAGGAAAGAAGAAGAATTAGCAGTGAAGTAGAAGAATGGCGATTGAGATCGCAA
ATCTAGGGTTTCAGTTGAATCCACTTCCCACATTCTCACCAGTCTTCGTTCCAAGAACGG
TCCTCAAATCCTCTAAACGGTGTCGTTTCGATCGGAGAAACCTTCTTCTTCTTCGCCCTC
CGGCCTCGTCTCTCGTCGACGAACAGCCACAGGTCTCCTTCACGGAACCGGAGAATCGCC
TTATCGATTCACTCGTCGGAATACAAGGTCGCGGTCGCTCGGCGTCTCCTCAGCAGCTCA
GTGATGTTGAAAGTGCAGTGCAAGCTTTGGAAGGTTTAGGAGGTGTGCCTGATCCGACAA
GCTCTAGTTTAATTGAAGGTCGATGGCAGTTAATGTTCACAACAAGACCCGGAACTGCAT
CCCCAATTCAGAGAACATTTGTGGGAGTTGACAACTTCAATGTCTTTCAAGAGGTATACC
TTCGGACAGATGACCCACGTGTGTCCAATATCGTAAGATTCTCTGAAGCAATAGGCGAGC
TAAAAGTAGAGGCAGCAGCATCAATTAAAGATGGAAAGCGGATCCTTTTCCGGTTTGATA
GAGCAGCCTTTTCTTTCAAATTTTTGCCATTTAAGGTTCCATATCCAGTGCCGTTTAGGC
TTCTAGGAGACGAAGCAAAGGGTTGGTTAGACACTACATATTTGTCACAATCTGGAAATC
TTCGTATCTCAAGAGGAAACAAGGGCACCACGTTTGTTCTGCAAAAGAACACTGAACCAA
GACAAAGATTTCTATCAGTCATTTCCAAGGGTACAGGAGTAATGGAGGCAATTAATGAGT
TCATCTCCCTAAATCAGAACAAGGCTACAGGTGAACCACAGCTCTTAGAGGGAGAATGGC
AAATGATTTGGAGCTCCCAGCAAGAGACAGACAGTTGGCTAGAAAATGCTGCCAATGGCC
TTATGGGGACGCAGATTGTGAAGGGTGAACAATTGAAGTTTGTGGTGGACATTTTGCTTG
GGTTCAGATTTTCCATGATCGGCACATTCGTGAAAACTGGAGCAACCACGTATGAAGTTA
CAATGAATGATGCAGCCATCGTGGCTGGCCCAGTCGGGCTTCCAATGGAAATGGAAAGCA
AGTTCAACTTAGAGTTGCTATACACTGATGACAAGATTAGAATCACCCGAGGTTTCAGAA
ATATTACTTTCGTCCATTTACGTGTGGGCTGATCCGATCCCGAATATATATCCATTTATC
CATTTGAACGAAGAAATTGCTCTATCGTTCTGTACATTTTAGTATAAATATAAATCTCAG
TACCACTTTATTTATATTCTATGGAACGGGAATGACCACAATATAT