Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g01110.t01
CDS Infomation

cds chromosome:12X:6:1206783:1210849:-1 gene:VIT_06s0004g01110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACGGTGATTCGGGTTCGGAACCGAAATCTCCGCTGTTGTCAAAGAGTGATGGTTGG
AGGTTCAGTGAGAGCCGCAGACGCGGCCGACTCAGTCGCCGGAATTCATCAAACTCGCTC
AGGAACGAGTTCGTTTCAAGGTTGCCCGAGAAGATCCGCTCCGGCATCGACGTCGAGTCT
CCGTCTCACCTTGACCTCTCCAAATCCAAAGGCTTGAGCGAAGGAGAAAAGGAATACTAC
GAAAGACAATGGGCTACACTGAAATCCTTTGAGGAAGTGGACTCTTTGATGACATCGAAC
TACATTGATGAGGAAGACCTTGTAGAACAAGCCGAACAAGCCGAACAAGCCCAACAAGAA
ATGGCAATGAGAATATCTAACTATGCAAATGTCGTGCTGCTTGCATTTAAGATATATGCC
ACAATAAAGAGTGGATCCATAGCTATTGCTGCATCAACATTAGACTCATTACTAGATCTC
ATGGCTGGTGGCATACTTTGGTTCACTCACCTATCAATGAAAAACATAAACATCTACCAA
TATCCCATTGGAAAATTGCGGGTGCAACCAGTAGGCATAATCATCTTTGCAGCTATCATG
GCTACTCTAGGCTTTCAAATATTGATCGAGGCTGTAGAAGAACTCGTTAAAGATAAAGCT
TCAGATAAGATGAGCTCAGACCAGTTGATCTGGTTATACACAATCATGTTATCTGCTACT
GCGGTAAAACTTGCACTTTGGCTTTACTGCAGAACTTCTAGAAACAAGATCGTCCGTGCC
TATGCAAATGATCACTATTTCGATGTGATAACGAATGTGGTAGGCTTAGTCGCTGCTGTT
CTTGGAGACAAATTTTACTGGTGGATTGACCCTGTTGGAGCTATTTTCCTTGCGGTTTAC
ACAATTACCAACTGGTCTCAAACTGTTTTAGAAAATGCAGTTTCTCTTGTGGGGCAATCT
GCGGCTCCTGAAGTTCTGCAGAAATTGACGTATCTTGTGATAAGGCACCCTCAGGTCAAG
CGTATTGATACTGTTCGGGCTTATACCTTTGGAGTTCTTTATTTTGTGGAGGTTGATATT
GAACTCCCAGAAGATTTACCCCTGAAAGAAGCTCATACCATAGGAGAGACCTTGCAGATA
AAGATCGAGAGGCTTCCTGAAGTTGAGCGGGCGTTTGTTCATCTGGATTTTGAATGTGAT
CACAAGCCAGAGCACTCTATTCTCAGTAGGCTGCCTAACAGTCAGCCTTGA

Peptide Sequence

PEP ID

VIT_06s0004g01110.t01
PEP Infomation

pep chromosome:12X:6:1206783:1210849:-1 gene:VIT_06s0004g01110 transcript:VIT_06s0004g01110.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDGDSGSEPKSPLLSKSDGWRFSESRRRGRLSRRNSSNSLRNEFVSRLPEKIRSGIDVES
PSHLDLSKSKGLSEGEKEYYERQWATLKSFEEVDSLMTSNYIDEEDLVEQAEQAEQAQQE
MAMRISNYANVVLLAFKIYATIKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKNINIYQ
YPIGKLRVQPVGIIIFAAIMATLGFQILIEAVEELVKDKASDKMSSDQLIWLYTIMLSAT
AVKLALWLYCRTSRNKIVRAYANDHYFDVITNVVGLVAAVLGDKFYWWIDPVGAIFLAVY
TITNWSQTVLENAVSLVGQSAAPEVLQKLTYLVIRHPQVKRIDTVRAYTFGVLYFVEVDI
ELPEDLPLKEAHTIGETLQIKIERLPEVERAFVHLDFECDHKPEHSILSRLPNSQP

Transcript Sequence

Transcript ID

VIT_06s0004g01110.t01
Transcript Infomation

cdna chromosome:12X:6:1206783:1210849:-1 gene:VIT_06s0004g01110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACTTCTTGTCTTGAGAGGAACTCTGAAGCTCCGAAAGGTTGGTTTCGGGTTGAGATGGAC
GGTGATTCGGGTTCGGAACCGAAATCTCCGCTGTTGTCAAAGAGTGATGGTTGGAGGTTC
AGTGAGAGCCGCAGACGCGGCCGACTCAGTCGCCGGAATTCATCAAACTCGCTCAGGAAC
GAGTTCGTTTCAAGGTTGCCCGAGAAGATCCGCTCCGGCATCGACGTCGAGTCTCCGTCT
CACCTTGACCTCTCCAAATCCAAAGGCTTGAGCGAAGGAGAAAAGGAATACTACGAAAGA
CAATGGGCTACACTGAAATCCTTTGAGGAAGTGGACTCTTTGATGACATCGAACTACATT
GATGAGGAAGACCTTGTAGAACAAGCCGAACAAGCCGAACAAGCCCAACAAGAAATGGCA
ATGAGAATATCTAACTATGCAAATGTCGTGCTGCTTGCATTTAAGATATATGCCACAATA
AAGAGTGGATCCATAGCTATTGCTGCATCAACATTAGACTCATTACTAGATCTCATGGCT
GGTGGCATACTTTGGTTCACTCACCTATCAATGAAAAACATAAACATCTACCAATATCCC
ATTGGAAAATTGCGGGTGCAACCAGTAGGCATAATCATCTTTGCAGCTATCATGGCTACT
CTAGGCTTTCAAATATTGATCGAGGCTGTAGAAGAACTCGTTAAAGATAAAGCTTCAGAT
AAGATGAGCTCAGACCAGTTGATCTGGTTATACACAATCATGTTATCTGCTACTGCGGTA
AAACTTGCACTTTGGCTTTACTGCAGAACTTCTAGAAACAAGATCGTCCGTGCCTATGCA
AATGATCACTATTTCGATGTGATAACGAATGTGGTAGGCTTAGTCGCTGCTGTTCTTGGA
GACAAATTTTACTGGTGGATTGACCCTGTTGGAGCTATTTTCCTTGCGGTTTACACAATT
ACCAACTGGTCTCAAACTGTTTTAGAAAATGCAGTTTCTCTTGTGGGGCAATCTGCGGCT
CCTGAAGTTCTGCAGAAATTGACGTATCTTGTGATAAGGCACCCTCAGGTCAAGCGTATT
GATACTGTTCGGGCTTATACCTTTGGAGTTCTTTATTTTGTGGAGGTTGATATTGAACTC
CCAGAAGATTTACCCCTGAAAGAAGCTCATACCATAGGAGAGACCTTGCAGATAAAGATC
GAGAGGCTTCCTGAAGTTGAGCGGGCGTTTGTTCATCTGGATTTTGAATGTGATCACAAG
CCAGAGCACTCTATTCTCAGTAGGCTGCCTAACAGTCAGCCTTGATTTCTTTTCGGGTTC
CTCGGTTGCTGTGGACTCGTCAACTTTTGTTCTTCTACAACACCCTATCATCTTCTGCCC
CAACTGAGTATTTGCTAAGCTTTCTTCTTCACAGAAACAAAAAGCCT