Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g00800.t01
CDS Infomation

cds chromosome:12X:6:906419:908409:-1 gene:VIT_06s0004g00800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCTGCAGAAGCAAAACCGGAGTCCATGGCTTTTTCTTCCCCAACCCCAGACACG
GCTCAAGAACTCCCCACCTCCACAGCCACACCCACCACCAAGGCCTCAAAGAAACTGAGC
CTTATCCCACTGATCTTCCTCATCTACTTTGAGGTTGCTGGTGGCCCCTTTGGAGAAGAG
CCTGCAGTGAAGGCAGCGGGGCCTTTGCTGGCAATTTTGGGCTTCCTGATCTTCCCTTTC
ATATGGAGCATCCCAGAGGCTCTCATCACTGCTGAGCTCTCCACTGCCTTTCCTGGTAAC
GGGGGTTTTGTGATATGGGCAGATCAAGCATTTGGCCCCTTTTGGGGGTCTCTCATGGGG
ACATTGAAATTCTTCAGTGGGGTCGTCAATGTGGCTGCTTTCCCTGTCTTGTGTATGGAC
TACCTGGAGCAGCTTTTCACAGTTTTCTCCTCTGGTCTGCCCAGAAGGCTTGCTCTGTTG
GGTTTCACTCTGACATTTTCTTTTCTGAATTATATGGGTTTGGTCATTGTGGGGTATACT
GCAGTTGTTTTGGGTGTGATTTCTCTCTTCCCTTTTATACTCATGTCTTTTATTGCAATC
CCCAAGATTCATCCCCACAGATGGGTGAGTTTAGGGCAGAAGGGTGTGAAGAAAGATTGG
AATCTCTACTTCAATACCCTCTTCTGGAACTTGAACTTTTGGGACAGTGTGAGCACACTA
GCAGGGGAAGTAGAAAAACCCCAGAAAACCTTTCCTCTGGCGCTGTTTTGTGCTGTGATT
TTCACTTGTGTTGCTTACTTGATTCCTCTTTTTGCCATCACTGGCGCTGTGTCCGTGGAC
CAGAGTGAGTGGGAGTCGGGATTCTTTGCCAATGCTGCTGCCATAGTCTCTGGAAAATGG
CTGAAAGTCTGGATTGAAATAGGTGCAGTTCTGTCCTCAATTGGCCTTTTTGAAGCTCAG
CTGAGCAGCTGTGTGTACCAGCTTGTGGGCATGGCAGATTTAGGATTATTGCCCCGATTC
TTTGCCATCCGATCAAAATGGTTCGACACTCCATGGGTGGGCATACTGCTGTCCACTGCG
ATCACCATTGGAGTTTCCTATATGGACTTCTCTAACATAGTATCTTCTGCAAACTTCTTA
TACAGCTTGGGGATGTTGCTGGAGTTTGCCTCCTACCTCTGGCTGAGGAGGAAGCAGCCC
ACCCTGAAGAGGCCATACCGGGTTCCAATGAGGCTGCCTGGATTGATCATAATGTGCCTG
ATTCCATCTGGGTTTCTGATTGTCATAATGGCCATTGCCACCAAGATTGTGTACTTGATC
AGTGGTCTGGTGACAGTGTTTGGAATTGGATGGTACTATCTGATGAAGTTCTGCAAGAAA
AAGAAATGGTTCAAGTTCAGCCATGAAGTTCAACAATATGAACATGAAGTTCAACAATAT
GAACAAGAATGA

Peptide Sequence

PEP ID

VIT_06s0004g00800.t01
PEP Infomation

pep chromosome:12X:6:906419:908409:-1 gene:VIT_06s0004g00800 transcript:VIT_06s0004g00800.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAAEAKPESMAFSSPTPDTAQELPTSTATPTTKASKKLSLIPLIFLIYFEVAGGPFGEE
PAVKAAGPLLAILGFLIFPFIWSIPEALITAELSTAFPGNGGFVIWADQAFGPFWGSLMG
TLKFFSGVVNVAAFPVLCMDYLEQLFTVFSSGLPRRLALLGFTLTFSFLNYMGLVIVGYT
AVVLGVISLFPFILMSFIAIPKIHPHRWVSLGQKGVKKDWNLYFNTLFWNLNFWDSVSTL
AGEVEKPQKTFPLALFCAVIFTCVAYLIPLFAITGAVSVDQSEWESGFFANAAAIVSGKW
LKVWIEIGAVLSSIGLFEAQLSSCVYQLVGMADLGLLPRFFAIRSKWFDTPWVGILLSTA
ITIGVSYMDFSNIVSSANFLYSLGMLLEFASYLWLRRKQPTLKRPYRVPMRLPGLIIMCL
IPSGFLIVIMAIATKIVYLISGLVTVFGIGWYYLMKFCKKKKWFKFSHEVQQYEHEVQQY
EQE

Transcript Sequence

Transcript ID

VIT_06s0004g00800.t01
Transcript Infomation

cdna chromosome:12X:6:906419:908409:-1 gene:VIT_06s0004g00800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGTGGGTTAAGGAAAGAGGGAGAGTACAAATACAACTCTCCCATTTGCCCATCCTCATAC
GAAGAATAGTCATTTTCCTTATACTAAAAGATAGGCTAATGTAACAATGAAGTCTCTGTC
ACATAGAAAGTCTCCAAAAGCAGCCAGAAATAGCTATGTCACCAGTCTCTCTCTGCCTTC
CCCAGATGTCCAAAATTTCTGTTGATCCACATAAAATCCGCAGCCCTCTGCAGAAGATTC
TTCACTGATTTACTCTCTGAAAACCCTCTTCAATGGAATAGGAATCAGCATCATCTTCTT
CTTCTCCTTCCCCAATCCAATCAGAAGCCATGGCTGCTGCAGAAGCAAAACCGGAGTCCA
TGGCTTTTTCTTCCCCAACCCCAGACACGGCTCAAGAACTCCCCACCTCCACAGCCACAC
CCACCACCAAGGCCTCAAAGAAACTGAGCCTTATCCCACTGATCTTCCTCATCTACTTTG
AGGTTGCTGGTGGCCCCTTTGGAGAAGAGCCTGCAGTGAAGGCAGCGGGGCCTTTGCTGG
CAATTTTGGGCTTCCTGATCTTCCCTTTCATATGGAGCATCCCAGAGGCTCTCATCACTG
CTGAGCTCTCCACTGCCTTTCCTGGTAACGGGGGTTTTGTGATATGGGCAGATCAAGCAT
TTGGCCCCTTTTGGGGGTCTCTCATGGGGACATTGAAATTCTTCAGTGGGGTCGTCAATG
TGGCTGCTTTCCCTGTCTTGTGTATGGACTACCTGGAGCAGCTTTTCACAGTTTTCTCCT
CTGGTCTGCCCAGAAGGCTTGCTCTGTTGGGTTTCACTCTGACATTTTCTTTTCTGAATT
ATATGGGTTTGGTCATTGTGGGGTATACTGCAGTTGTTTTGGGTGTGATTTCTCTCTTCC
CTTTTATACTCATGTCTTTTATTGCAATCCCCAAGATTCATCCCCACAGATGGGTGAGTT
TAGGGCAGAAGGGTGTGAAGAAAGATTGGAATCTCTACTTCAATACCCTCTTCTGGAACT
TGAACTTTTGGGACAGTGTGAGCACACTAGCAGGGGAAGTAGAAAAACCCCAGAAAACCT
TTCCTCTGGCGCTGTTTTGTGCTGTGATTTTCACTTGTGTTGCTTACTTGATTCCTCTTT
TTGCCATCACTGGCGCTGTGTCCGTGGACCAGAGTGAGTGGGAGTCGGGATTCTTTGCCA
ATGCTGCTGCCATAGTCTCTGGAAAATGGCTGAAAGTCTGGATTGAAATAGGTGCAGTTC
TGTCCTCAATTGGCCTTTTTGAAGCTCAGCTGAGCAGCTGTGTGTACCAGCTTGTGGGCA
TGGCAGATTTAGGATTATTGCCCCGATTCTTTGCCATCCGATCAAAATGGTTCGACACTC
CATGGGTGGGCATACTGCTGTCCACTGCGATCACCATTGGAGTTTCCTATATGGACTTCT
CTAACATAGTATCTTCTGCAAACTTCTTATACAGCTTGGGGATGTTGCTGGAGTTTGCCT
CCTACCTCTGGCTGAGGAGGAAGCAGCCCACCCTGAAGAGGCCATACCGGGTTCCAATGA
GGCTGCCTGGATTGATCATAATGTGCCTGATTCCATCTGGGTTTCTGATTGTCATAATGG
CCATTGCCACCAAGATTGTGTACTTGATCAGTGGTCTGGTGACAGTGTTTGGAATTGGAT
GGTACTATCTGATGAAGTTCTGCAAGAAAAAGAAATGGTTCAAGTTCAGCCATGAAGTTC
AACAATATGAACATGAAGTTCAACAATATGAACAAGAATGACAGCCAATGCTATCTTATA
TTGGAATCAAAGGCTGATACCAGCAAAATTGAATTGAATACAGAGAGCATTCGGGTGGAT
TTACCTACAAAGCGTAGGTTCAATTTGATGCCTATGGTCATTTTCTTTTGTGTTCATTTA
GAGTTTTTTTTAGTAATTCTATAAATGACTTTTAATATTTTTAATAGTTAAAAATTTTCA
TCATTCAAGTG