Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g00750.t01
CDS Infomation

cds chromosome:12X:6:869799:880092:1 gene:VIT_06s0004g00750 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGATGAGGGTAGCTGAAGTGGGAGTGGGGGAGCTGGTGAAGGCGGGATTATCCATG
GAAGAAGCTCAAGAATTTGAGAGAATTTTGAAGGCAGCAGTGGGCGGAGCCAGAGGGTCG
GACCCAAGTGAGGTGTGGCGCGAGGTGGTGGCTCGGAGGGTGCTGAGCCCATCGCACCCA
CATGGGTTGCACCGGCTGGTCTTCCACTCGGTCTATGCTGAATGGGATGAGTCCATCAGA
GGCCCTCCTCTCTACTGGTTCCCTTCTCTATATGAGTCTATGCATACGAACTTGGGTAGA
TTGATGGAAACCTATGGTCCACGGCTACTAGGGTTATCATACAAGGATCCTATAACAAGT
TACAGCCTCTTTCAGAAGTTCTCTGTTCAAAATCTTGAGGTCTACTGGTCGATGGTTCTA
AAAGAGCTTTCAGTTTTGTTCCATAGAGCCCCAAGGTGCATCCTAGATACAACTGACAAA
TCAAAGCATGGGGGAACATGGCTTCCTGGTGCGGTTTTGAATATTGCTGAATGTTGTTTG
CTACCTGTAAGTTACCCGAGAAAGCATGATAACAGTTTGGCTGTTGTATGGAGAGATGAA
GGCAATGATGATTCTCCTGTTAATCGGTTGACATTAAAAGAACTCCGAGAACAAGTAATG
ATGGTGGCAAATGTGTTGGATGCTACTTTCTCAAAGGGCGATGCAATTGCGATTGACATG
CCGATGACAGTCCATGCAGTTATCATATACTTGGCAATTGTTCTAGCAGGATTTGTTGTT
GTATCAATAGCCGACAGCTTTGCAGCCAAGGAAATTGCAACTCGTTTGCACGTTTCAAAA
GCAAAGGGTATCTTCACTCAGGACTTCATTGTAAGAGGGGGTCGAAAATTTCCTTTGTAC
AGTCGAGTTGTAGAAGCTGCTCCACATAAAGTGATTGTGCTCCCTGCAATTGGAACAGAT
GTAGATGTTCAATTAAGAGAACAAGATTTATCATGGAAAGATTTCCTTTCCCATGCTGAT
CATCTTCCAAGACCGAATAACTACTCACCTGTCTATCAACCAATAGATGCTGTGACTAAT
ATCCTCTTTTCATCTGGAACCACAGGAGATCCTAAAGCTATTCCATGGACTCAAGTTTCT
CCAATTAGATCTTCTGCTGATGCATGGGCACAGATCAATATTCAAGTTGGAGATGTCTTC
TGCTGGCCAACAAATCTAGGATGGGTGATGGGACCTACTATACTTTATGCATCATTTCTA
ACTGGTGCAGCTCTAGCTCTCTATCATGGATCTCCTCTTGACCGTGGCTTTGGAAAGTTT
GTTCAGGATGCGGGAGTAACTGTCTTGGGTACAGTTCCAAGCCTAGTGAAGACTTGGAAA
AATACAGGATGCATGGAAGGCTTAGATTGGACAAAGATAAAGTCGTTTGCTTCCACTGGA
GAAACATCCAATGTTGATGACGACCTTTGGCTTTCTTCAAGGGCTTATTACAAACCCATT
ATTGAATGTTGTGGAGGCACAGAGCTTGCTTCAAGCTACATCCAAGGAAGCGTGTTGCAA
CCTCAAGCTTTTGGAACTTTTAGCACTGCTGCAATGACAACAGGCTTTGTCATTCTTGAT
GAAAATGGTGTTCCCTATCCAGACGATCAACCTTGTGTTGGTGAAGTGGGTTTGTTCCCT
CTAATCATGGGAGCAACTGATTGGTTACTAAATGCTGACCATGAGGAGGTCTACTTCAAG
GGAATGCCAATGTACAAAGGAATGCACCTCAGGAGACATGGGGACATCATTAAGAGGACT
GTAGGAGGCTATTTTGTTGTACAAGGCAGAGCTGATGACACCATGAATCTTGGGGGCATC
AAGACAAGTTCAGTTGAAATTGAACGTGTGTGTGACAAGGCTGATGAAAGTGTTTTGGAA
AGTGCTGCAATTAGTACTGCACCACTAAATGGTGGTCCAGAACTGTTGGTTGTATTTGTG
GTACTGAAGAAAGGATATGATTGTGAACCCAATGAACTGAAGATGAAATTCTCAAAAGCC
ATACAGCGGAACCTTAACCCTTTGTTTAAGGTGAACTTTGTTAAGATTGTCCCCGAGTTT
CCTCGAACTGCTTCTAACAAGATACTGAGGCGAGTTTTGAGGGACCAAATTAAGCATGAG
CTTTCAGTTCGGAGTAGAATTTAA

Peptide Sequence

PEP ID

VIT_06s0004g00750.t01
PEP Infomation

pep chromosome:12X:6:869799:880092:1 gene:VIT_06s0004g00750 transcript:VIT_06s0004g00750.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGMRVAEVGVGELVKAGLSMEEAQEFERILKAAVGGARGSDPSEVWREVVARRVLSPSHP
HGLHRLVFHSVYAEWDESIRGPPLYWFPSLYESMHTNLGRLMETYGPRLLGLSYKDPITS
YSLFQKFSVQNLEVYWSMVLKELSVLFHRAPRCILDTTDKSKHGGTWLPGAVLNIAECCL
LPVSYPRKHDNSLAVVWRDEGNDDSPVNRLTLKELREQVMMVANVLDATFSKGDAIAIDM
PMTVHAVIIYLAIVLAGFVVVSIADSFAAKEIATRLHVSKAKGIFTQDFIVRGGRKFPLY
SRVVEAAPHKVIVLPAIGTDVDVQLREQDLSWKDFLSHADHLPRPNNYSPVYQPIDAVTN
ILFSSGTTGDPKAIPWTQVSPIRSSADAWAQINIQVGDVFCWPTNLGWVMGPTILYASFL
TGAALALYHGSPLDRGFGKFVQDAGVTVLGTVPSLVKTWKNTGCMEGLDWTKIKSFASTG
ETSNVDDDLWLSSRAYYKPIIECCGGTELASSYIQGSVLQPQAFGTFSTAAMTTGFVILD
ENGVPYPDDQPCVGEVGLFPLIMGATDWLLNADHEEVYFKGMPMYKGMHLRRHGDIIKRT
VGGYFVVQGRADDTMNLGGIKTSSVEIERVCDKADESVLESAAISTAPLNGGPELLVVFV
VLKKGYDCEPNELKMKFSKAIQRNLNPLFKVNFVKIVPEFPRTASNKILRRVLRDQIKHE
LSVRSRI

Transcript Sequence

Transcript ID

VIT_06s0004g00750.t01
Transcript Infomation

cdna chromosome:12X:6:869799:880092:1 gene:VIT_06s0004g00750 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCGACATCATCAATTGTTGTGGGTGTGATAACTTTTGAGAGATGTGTGATTGGATTATC
CCAAAGGTCATTGTGTCAATGTTACTAAAGGGAGATCCTAGAGAGAGAAAGTCTGCCACT
TTCATCGATCTTAGAAAGAGAAGGGGGTGGTCTGGAGATGGGGATGAGGGTAGCTGAAGT
GGGAGTGGGGGAGCTGGTGAAGGCGGGATTATCCATGGAAGAAGCTCAAGAATTTGAGAG
AATTTTGAAGGCAGCAGTGGGCGGAGCCAGAGGGTCGGACCCAAGTGAGGTGTGGCGCGA
GGTGGTGGCTCGGAGGGTGCTGAGCCCATCGCACCCACATGGGTTGCACCGGCTGGTCTT
CCACTCGGTCTATGCTGAATGGGATGAGTCCATCAGAGGCCCTCCTCTCTACTGGTTCCC
TTCTCTATATGAGTCTATGCATACGAACTTGGGTAGATTGATGGAAACCTATGGTCCACG
GCTACTAGGGTTATCATACAAGGATCCTATAACAAGTTACAGCCTCTTTCAGAAGTTCTC
TGTTCAAAATCTTGAGGTCTACTGGTCGATGGTTCTAAAAGAGCTTTCAGTTTTGTTCCA
TAGAGCCCCAAGGTGCATCCTAGATACAACTGACAAATCAAAGCATGGGGGAACATGGCT
TCCTGGTGCGGTTTTGAATATTGCTGAATGTTGTTTGCTACCTGTAAGTTACCCGAGAAA
GCATGATAACAGTTTGGCTGTTGTATGGAGAGATGAAGGCAATGATGATTCTCCTGTTAA
TCGGTTGACATTAAAAGAACTCCGAGAACAAGTAATGATGGTGGCAAATGTGTTGGATGC
TACTTTCTCAAAGGGCGATGCAATTGCGATTGACATGCCGATGACAGTCCATGCAGTTAT
CATATACTTGGCAATTGTTCTAGCAGGATTTGTTGTTGTATCAATAGCCGACAGCTTTGC
AGCCAAGGAAATTGCAACTCGTTTGCACGTTTCAAAAGCAAAGGGTATCTTCACTCAGGA
CTTCATTGTAAGAGGGGGTCGAAAATTTCCTTTGTACAGTCGAGTTGTAGAAGCTGCTCC
ACATAAAGTGATTGTGCTCCCTGCAATTGGAACAGATGTAGATGTTCAATTAAGAGAACA
AGATTTATCATGGAAAGATTTCCTTTCCCATGCTGATCATCTTCCAAGACCGAATAACTA
CTCACCTGTCTATCAACCAATAGATGCTGTGACTAATATCCTCTTTTCATCTGGAACCAC
AGGAGATCCTAAAGCTATTCCATGGACTCAAGTTTCTCCAATTAGATCTTCTGCTGATGC
ATGGGCACAGATCAATATTCAAGTTGGAGATGTCTTCTGCTGGCCAACAAATCTAGGATG
GGTGATGGGACCTACTATACTTTATGCATCATTTCTAACTGGTGCAGCTCTAGCTCTCTA
TCATGGATCTCCTCTTGACCGTGGCTTTGGAAAGTTTGTTCAGGATGCGGGAGTAACTGT
CTTGGGTACAGTTCCAAGCCTAGTGAAGACTTGGAAAAATACAGGATGCATGGAAGGCTT
AGATTGGACAAAGATAAAGTCGTTTGCTTCCACTGGAGAAACATCCAATGTTGATGACGA
CCTTTGGCTTTCTTCAAGGGCTTATTACAAACCCATTATTGAATGTTGTGGAGGCACAGA
GCTTGCTTCAAGCTACATCCAAGGAAGCGTGTTGCAACCTCAAGCTTTTGGAACTTTTAG
CACTGCTGCAATGACAACAGGCTTTGTCATTCTTGATGAAAATGGTGTTCCCTATCCAGA
CGATCAACCTTGTGTTGGTGAAGTGGGTTTGTTCCCTCTAATCATGGGAGCAACTGATTG
GTTACTAAATGCTGACCATGAGGAGGTCTACTTCAAGGGAATGCCAATGTACAAAGGAAT
GCACCTCAGGAGACATGGGGACATCATTAAGAGGACTGTAGGAGGCTATTTTGTTGTACA
AGGCAGAGCTGATGACACCATGAATCTTGGGGGCATCAAGACAAGTTCAGTTGAAATTGA
ACGTGTGTGTGACAAGGCTGATGAAAGTGTTTTGGAAAGTGCTGCAATTAGTACTGCACC
ACTAAATGGTGGTCCAGAACTGTTGGTTGTATTTGTGGTACTGAAGAAAGGATATGATTG
TGAACCCAATGAACTGAAGATGAAATTCTCAAAAGCCATACAGCGGAACCTTAACCCTTT
GTTTAAGGTGAACTTTGTTAAGATTGTCCCCGAGTTTCCTCGAACTGCTTCTAACAAGAT
ACTGAGGCGAGTTTTGAGGGACCAAATTAAGCATGAGCTTTCAGTTCGGAGTAGAATTTA
AAGCAACATCATCAATTGTTTGTGGGTGTGATATGAACTTTTGAGAGATGTATGATTAGA
TTATCCTAAAGGTCAGTGTGTCAATGTTACTAATAA