Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g00620.t01
CDS Infomation

cds chromosome:12X:6:772780:783373:-1 gene:VIT_06s0004g00620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACTTGCCTAGACCATCTCACCATGGAGAAGAGAAGTTTGACTGGCTTTCACAGTGG
TATCCAGTTGCCCCAGTCTGTGATCTTGACAAGAGAAAGCCGCATTCCAAGAGGGTGATT
GGTCTTGATGTAGTTGTGTGGTGGGATAGAAATGAAAGTGAATGGAAAGTGTTTGATGAT
GCTTGTGCTCATAGGTTGGCTCCATTGTCTGAAGGGAGGATTGATCAGTGGGGCCGGTTG
CAGTGTGTGTACCATGGCTGGTGTTTTAATGGCTCTGGTGACTGCAAATTCATTCCTCAG
GCACCCCCAGATGGTCCTCCGGTTCACACATTCAAGAAAGCACGTGCAGCTGTTTATCCA
AGTGCTGTACAGCATGGAATTGTCTGGTTTTGGCCAAACACCGATCCTCAATTCAAAGAT
ATTTTTACGAAGAAAAGGCCTCCTTACATCCCAGAATTGGATGACCTATCATATACCAAG
TCGATGGGAGCTAGAGATTTTCCATTCGGGTATGAGATTCTGATGGAAAATGTCATGGAC
CCTGCTCATGTTGCATATGCACATTACGGGATAGCAGATAGAGAAGGGGGGACACCAATT
GAGATCAGTGTGAAGAGATCAGCCATAGATGGTTTTGATGCAGAGAGGGAGCTTGCCAGG
AGCAAATTTATTCCACCCTGTTTGTACTATACCTGTTTGGATTTTCCGGCATATCAAAGT
AATGAATCTGTGTCATCAGGCCTTACCAAAGAGGAACCATCGTCTCACATGTCTCCAAAA
AGAGCACTTCTGATTCTTATCTGTGTTCCAGTAAGTCCAGGAAATAGCAGATTGATATGG
ACTTTTCCAAGAAACTTTGGATTGTGGACTGATCATATCATTCCGCGATGGATGCTTCAT
ATGAGTCAAAACCTTATTCTAGATTCAGATTTATATCTTCTCCATTTAGAGGAGCGTAAG
ATTATGAAGGCTGGCCCTTCCAACTGGCACAAGGCTTGTTTTGTGCCAACAAAGTCGGAT
GCCCACATCGTTGCCTTCAGAGCATGGTTGAGGAAGTACTCAGGTGGCCAACTTGATTGG
GGAACCAATTTCAGCAGTGCCCTGCCCCCAACTCCTCCTAAAGAGCAGTTAATGGACAGG
TACTGGTCTCATGTGGTGAACTGCAGCAGCTGTAGTGTTGCATATAAAGGTCTCCAGGTG
CTTGAGGTGGTGTTGCAGATCTTCTCAATTGCTCTAATCGGGATTCCTGTGATCAACCAT
GGTGTGATGTCAGTGGCTGCAAGGATTACAGCGGTATCCATGGCGATTCTATGTTTTGCA
GCTTCAAGGTGGTTGTCTTACTTCATCTACAAAACCTTCCATTTCCATGACTACACACAT
GCCTTCTGCTGA

Peptide Sequence

PEP ID

VIT_06s0004g00620.t01
PEP Infomation

pep chromosome:12X:6:772780:783373:-1 gene:VIT_06s0004g00620 transcript:VIT_06s0004g00620.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLPRPSHHGEEKFDWLSQWYPVAPVCDLDKRKPHSKRVIGLDVVVWWDRNESEWKVFDD
ACAHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKARAAVYP
SAVQHGIVWFWPNTDPQFKDIFTKKRPPYIPELDDLSYTKSMGARDFPFGYEILMENVMD
PAHVAYAHYGIADREGGTPIEISVKRSAIDGFDAERELARSKFIPPCLYYTCLDFPAYQS
NESVSSGLTKEEPSSHMSPKRALLILICVPVSPGNSRLIWTFPRNFGLWTDHIIPRWMLH
MSQNLILDSDLYLLHLEERKIMKAGPSNWHKACFVPTKSDAHIVAFRAWLRKYSGGQLDW
GTNFSSALPPTPPKEQLMDRYWSHVVNCSSCSVAYKGLQVLEVVLQIFSIALIGIPVINH
GVMSVAARITAVSMAILCFAASRWLSYFIYKTFHFHDYTHAFC

Transcript Sequence

Transcript ID

VIT_06s0004g00620.t01
Transcript Infomation

cdna chromosome:12X:6:772780:783373:-1 gene:VIT_06s0004g00620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAGCCATGGAAGCTCTCAGAGCTCCCTCGTTTCCTTCATTTCATTTGTCAGTGCTCCCAA
CTAGATTTCATACCAGGTCATATGACAAACCCTTGTTGCATCTTCCCTTTAATCCATTAC
TCAATCCTTCTTTTTCATCAATTTGTGGAAACTTTTCAAAATCAAAGCCTTGCACAGCCA
GATCTTCCGCTAGTTCAAGTGAAGCCATGGACTTGCCTAGACCATCTCACCATGGAGAAG
AGAAGTTTGACTGGCTTTCACAGTGGTATCCAGTTGCCCCAGTCTGTGATCTTGACAAGA
GAAAGCCGCATTCCAAGAGGGTGATTGGTCTTGATGTAGTTGTGTGGTGGGATAGAAATG
AAAGTGAATGGAAAGTGTTTGATGATGCTTGTGCTCATAGGTTGGCTCCATTGTCTGAAG
GGAGGATTGATCAGTGGGGCCGGTTGCAGTGTGTGTACCATGGCTGGTGTTTTAATGGCT
CTGGTGACTGCAAATTCATTCCTCAGGCACCCCCAGATGGTCCTCCGGTTCACACATTCA
AGAAAGCACGTGCAGCTGTTTATCCAAGTGCTGTACAGCATGGAATTGTCTGGTTTTGGC
CAAACACCGATCCTCAATTCAAAGATATTTTTACGAAGAAAAGGCCTCCTTACATCCCAG
AATTGGATGACCTATCATATACCAAGTCGATGGGAGCTAGAGATTTTCCATTCGGGTATG
AGATTCTGATGGAAAATGTCATGGACCCTGCTCATGTTGCATATGCACATTACGGGATAG
CAGATAGAGAAGGGGGGACACCAATTGAGATCAGTGTGAAGAGATCAGCCATAGATGGTT
TTGATGCAGAGAGGGAGCTTGCCAGGAGCAAATTTATTCCACCCTGTTTGTACTATACCT
GTTTGGATTTTCCGGCATATCAAAGTAATGAATCTGTGTCATCAGGCCTTACCAAAGAGG
AACCATCGTCTCACATGTCTCCAAAAAGAGCACTTCTGATTCTTATCTGTGTTCCAGTAA
GTCCAGGAAATAGCAGATTGATATGGACTTTTCCAAGAAACTTTGGATTGTGGACTGATC
ATATCATTCCGCGATGGATGCTTCATATGAGTCAAAACCTTATTCTAGATTCAGATTTAT
ATCTTCTCCATTTAGAGGAGCGTAAGATTATGAAGGCTGGCCCTTCCAACTGGCACAAGG
CTTGTTTTGTGCCAACAAAGTCGGATGCCCACATCGTTGCCTTCAGAGCATGGTTGAGGA
AGTACTCAGGTGGCCAACTTGATTGGGGAACCAATTTCAGCAGTGCCCTGCCCCCAACTC
CTCCTAAAGAGCAGTTAATGGACAGGTACTGGTCTCATGTGGTGAACTGCAGCAGCTGTA
GTGTTGCATATAAAGGTCTCCAGGTGCTTGAGGTGGTGTTGCAGATCTTCTCAATTGCTC
TAATCGGGATTCCTGTGATCAACCATGGTGTGATGTCAGTGGCTGCAAGGATTACAGCGG
TATCCATGGCGATTCTATGTTTTGCAGCTTCAAGGTGGTTGTCTTACTTCATCTACAAAA
CCTTCCATTTCCATGACTACACACATGCCTTCTGCTGAGACCAGTGTTTCACTTGGTATT
CAGAAATCACCAAAATCAAGAATATTGAAGTCAAAGAAAGGGTTCCATAGGTTCCAACTC
AAGAACCTAATATCGTCTAATGAGATAACTACAATTTTGAGTGTGAATTACATGGAACCT
AATATTGTCTGATAAAATAACTACAATTTTGAGTGTGAATTACAACTAGTACTGCACGAT
ACAATATACAAATACTGCAAGGATTTGATTCGCATTGCAATATGATCTCGTGCAAATGGG
GAAACATTCTCGTCAGCAGCACCCATAAATGTAGGTAAAAAATAAAAAAGCTGCCGCGAC
ACTTTTCCAACTCCACTCATGCCATTAAACTTCTATCCATAATCACCCAACCAGGTGACG
GTGCCATTGAAGTAATTGTTGAGTCGGAGGGAGGCAGCC