Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g00610.t01
CDS Infomation

cds chromosome:12X:6:769211:772779:-1 gene:VIT_06s0004g00610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGCTCTGAGGCCTTGTATTGTCCCAGCAAGGCTTCCTACAGCCTCATATGAGAAA
CCCATGTTGCATCTTCCATTTAGATCGGTACCCACTTCGATTTTCCCACCGATTCGTCAA
TGTACTGCAAGATCCAGGGTTGTCACGGCTGTTTCATCCACTGTTTCGACTGAACCCGTG
AACCCAGTTGAGCCAGAGGTCCAGAGTCACAGCCAGGAAGAGAAGTTCAATTGGCTGTTG
CAGTGGTATCCTGTTATGCCTGTGTGTGACCTTGACAAGAGGATTCCACATGCCAAGAAG
GTGATCGGTCTTGATGTGGTGGTGTGGTGGGACAGGAATGAAAATGCTTGGAAGGTGTTT
GATGACATGTGTCCTCATAGGCTGGCTCCACTGTCTGAAGGGAGGATTGATCAGTGGGGC
AGGTTGCAGTGTGTCTACCATGGTTGGTGTTTCAATGGCTCAGGTGACTGCAAATTCATT
CCACAGGCCCCACCAGATGGTCCTCCGGTTCACACATTCAAGAAAGCATGTGTATCTGTT
TATCCAAGTACTGTGCAGAATGACATTGTCTGGTTTTGGCCAAATACGGATCCTCAATAC
AAAGACATTCTTATGAAGAACAAGCCTCCCTACATCCCAGAATTGGATGACCCCTCGTAT
ACTAGGTTAATGGGTAACAGAGAGATTCCATACGGGTACGAGGTTCTGATTGAAAATCTA
ATGGACCCTGCTCATGTTCCCTATGCACATTATGGAATAATGACAGCTGACAGAGAAGGG
GGCAGACCGTTGGAAATGAAAATACAGAAATTAGATCGCAGTGGTTTCATTGGAAAGCAA
GAGGGGGGTACTAGCAAATTTATACCACCTTGTGTGTTTTATGTTTCTAGCGATCTTTTC
ATAGATAAAACTAATGGCTCTGCATCATCAGTGGAAACCAAAAAGGAGGTGCAACGAAGG
ATGCTTCTGATTTTTATTTGCATTCCAGTTAGTCCGGGTAATAGCAGACTGATATGGACC
TTTCCAAGAAATTTTGGAGTTTGGGTTGACCGAGTGGTTCCCCGATGGATGTTTCATGTG
GGACAGAACCTCATTCTAGATTCCGACTTGTATCTTCTTCATGTGGAGGAGCGCAAGATA
ATGGATATTGGCCCTTCCAACTGGCAAAAAGCTTGTTTTGTGCCAACAAAGTCAGATGCC
TGTGTGGTTGGCTTCAGAAAGTGGTTAAACAAGTATGCAGGGGGTCAAGTTGACTGGGGA
ACCAAGTTCAGTGGAGCTCTTCCCCCAACTCCTCCTAGAGAGCAGCTAATGGACAGGTAC
TGGTCTCATGTGGTGAACTGCAGCAGTTGCAGAGTGGCAATCAAAGGTCTGAATGCGCTC
GAGGTTGTCTTACAAGTCATCTCAGTTGCTTCAATTGGGATCGTTGCTGCAACTAAGCAA
AGCCTGATGTCGGTTGCTGCTAGAACTGCACTGGTCTCCATGGCAGTCATATGCTTTGCT
GCTTCAAGGTGGTTGTCTCACTTCATCTACAAAATCTTCCACTTCCATGACTACAACCAT
GCTCTTAGATGA

Peptide Sequence

PEP ID

VIT_06s0004g00610.t01
PEP Infomation

pep chromosome:12X:6:769211:772779:-1 gene:VIT_06s0004g00610 transcript:VIT_06s0004g00610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEALRPCIVPARLPTASYEKPMLHLPFRSVPTSIFPPIRQCTARSRVVTAVSSTVSTEPV
NPVEPEVQSHSQEEKFNWLLQWYPVMPVCDLDKRIPHAKKVIGLDVVVWWDRNENAWKVF
DDMCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKACVSV
YPSTVQNDIVWFWPNTDPQYKDILMKNKPPYIPELDDPSYTRLMGNREIPYGYEVLIENL
MDPAHVPYAHYGIMTADREGGRPLEMKIQKLDRSGFIGKQEGGTSKFIPPCVFYVSSDLF
IDKTNGSASSVETKKEVQRRMLLIFICIPVSPGNSRLIWTFPRNFGVWVDRVVPRWMFHV
GQNLILDSDLYLLHVEERKIMDIGPSNWQKACFVPTKSDACVVGFRKWLNKYAGGQVDWG
TKFSGALPPTPPREQLMDRYWSHVVNCSSCRVAIKGLNALEVVLQVISVASIGIVAATKQ
SLMSVAARTALVSMAVICFAASRWLSHFIYKIFHFHDYNHALR

Transcript Sequence

Transcript ID

VIT_06s0004g00610.t01
Transcript Infomation

cdna chromosome:12X:6:769211:772779:-1 gene:VIT_06s0004g00610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGCTCTGAGGCCTTGTATTGTCCCAGCAAGGCTTCCTACAGCCTCATATGAGAAA
CCCATGTTGCATCTTCCATTTAGATCGGTACCCACTTCGATTTTCCCACCGATTCGTCAA
TGTACTGCAAGATCCAGGGTTGTCACGGCTGTTTCATCCACTGTTTCGACTGAACCCGTG
AACCCAGTTGAGCCAGAGGTCCAGAGTCACAGCCAGGAAGAGAAGTTCAATTGGCTGTTG
CAGTGGTATCCTGTTATGCCTGTGTGTGACCTTGACAAGAGGATTCCACATGCCAAGAAG
GTGATCGGTCTTGATGTGGTGGTGTGGTGGGACAGGAATGAAAATGCTTGGAAGGTGTTT
GATGACATGTGTCCTCATAGGCTGGCTCCACTGTCTGAAGGGAGGATTGATCAGTGGGGC
AGGTTGCAGTGTGTCTACCATGGTTGGTGTTTCAATGGCTCAGGTGACTGCAAATTCATT
CCACAGGCCCCACCAGATGGTCCTCCGGTTCACACATTCAAGAAAGCATGTGTATCTGTT
TATCCAAGTACTGTGCAGAATGACATTGTCTGGTTTTGGCCAAATACGGATCCTCAATAC
AAAGACATTCTTATGAAGAACAAGCCTCCCTACATCCCAGAATTGGATGACCCCTCGTAT
ACTAGGTTAATGGGTAACAGAGAGATTCCATACGGGTACGAGGTTCTGATTGAAAATCTA
ATGGACCCTGCTCATGTTCCCTATGCACATTATGGAATAATGACAGCTGACAGAGAAGGG
GGCAGACCGTTGGAAATGAAAATACAGAAATTAGATCGCAGTGGTTTCATTGGAAAGCAA
GAGGGGGGTACTAGCAAATTTATACCACCTTGTGTGTTTTATGTTTCTAGCGATCTTTTC
ATAGATAAAACTAATGGCTCTGCATCATCAGTGGAAACCAAAAAGGAGGTGCAACGAAGG
ATGCTTCTGATTTTTATTTGCATTCCAGTTAGTCCGGGTAATAGCAGACTGATATGGACC
TTTCCAAGAAATTTTGGAGTTTGGGTTGACCGAGTGGTTCCCCGATGGATGTTTCATGTG
GGACAGAACCTCATTCTAGATTCCGACTTGTATCTTCTTCATGTGGAGGAGCGCAAGATA
ATGGATATTGGCCCTTCCAACTGGCAAAAAGCTTGTTTTGTGCCAACAAAGTCAGATGCC
TGTGTGGTTGGCTTCAGAAAGTGGTTAAACAAGTATGCAGGGGGTCAAGTTGACTGGGGA
ACCAAGTTCAGTGGAGCTCTTCCCCCAACTCCTCCTAGAGAGCAGCTAATGGACAGGTAC
TGGTCTCATGTGGTGAACTGCAGCAGTTGCAGAGTGGCAATCAAAGGTCTGAATGCGCTC
GAGGTTGTCTTACAAGTCATCTCAGTTGCTTCAATTGGGATCGTTGCTGCAACTAAGCAA
AGCCTGATGTCGGTTGCTGCTAGAACTGCACTGGTCTCCATGGCAGTCATATGCTTTGCT
GCTTCAAGGTGGTTGTCTCACTTCATCTACAAAATCTTCCACTTCCATGACTACAACCAT
GCTCTTAGATGAAACCGGTATTTTCTATTGTGTAGCTTTTGAACCCCCAAGTTCTGGGTT
TGCATAGATAGGGCTTCTTTCCATATACATGTACAGGATAGCTATATTCAGCCAGCAGAG
TAAGAATGAACAAGTTGCTAAGTTTTC