Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g00600.t01
CDS Infomation

cds chromosome:12X:6:765694:767656:-1 gene:VIT_06s0004g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAAGAAGACTCCAATTTGACTGAGCCCATTGGGCAAAACCTAATCAAAGTGATTAGC
AATGTCTGCTTCTCAGTCTTCGTCTTCGCTGTTCTCATCTTCACTGTAATTGCAATCACC
TACCAGCCTCCAGATCCATGGCTGGAATCCTCACCGGCCCTCACCAAACTCTTCACCCAA
TTCCACAACGCCACCTTCCAGAACGACAATTCCGTCCTTAAAACCGGCGAGGATTTGCCT
GATTTCGGGGTCGCTGAGACCCCCGCGGTTGCTCCGGCCGTCATGCCGATCACCGAGGCG
GTGATTGAGGAGAAGGAGGAGAGGGTGACCAATATGTCATTGAAATCGGATTGTGATCTG
ACAGGGCCGGTGAATTGTTCGGACCCTCGTGTTTTGATTGCTATCGAGAGGTTCAACTTG
AGGTTTTTTAAGGCAATTGTGTTTTTGGAGTATCAGACACCGGTGAGCGGATCGGCTCCA
AATGAGTGTGATGTGTCGTGGAGGTTTCGGAACAAGAAGGAGAAATCATGGCGGAAGTAT
AGGGATTTTAGGAGGTTTAGGATTGGTGTAGGTGAGAATTGCACGTATCGTGTGACTGGT
GCAAATGGTTGGCATTCCGGTGTCAATGCTCGGCGGCAAAGGAGTAGAGTTAATGCCACG
AGGAGTGGTGGGGGCATTGGTAGAATTGCCCCACCAGTCCGTGATGAAGAGATCAATGAT
ACGATCCCAGTTTTGGGATCAGAGATGACTTTTCGGAAGGGGAAGTACTTGTATTATTCA
CGTGGAGGGGATTATTGTAAAGGGATGAATCATTTTCTTTGGAGTTTCTTGTGTGGCCTT
GGGGAGGCTCAGTATTTGAACAGGACATTTGTGATGGATTTGAGTATCTGTTTGGCAGCA
ACGTATAATCCAAGTAATAAGGATGAGGAAGGAAAGGATTTTCGGTATTATTTTGATTTC
GAGCATCTTAAGGAGGTGGCATCAATCGTTGAGGAGGGAGAGTTTTTGAGAGATTGGAAA
AAGTGGGATCATTCGCGGAAAAGGAAAGTTCCAGTTAGAAAGGTTGCGACCTATAAGGTT
ACACCAATGCAACTAAGTAAGGATAGGAGCACAATTATCTATAGGCAGTTTGATGCACCG
GAGCCAGAAAATTATTGGTATAGAGTATGTGAAGGGCAAGCTGCAAAGTATATTCAGAGG
CCATGGCATGCACTGTGGAAATCAAAACGGTTGATGAATATTGTTACAGAGATCAGTGGG
CGAATGGACTGGGATTTTGATGCAGTCCATGTGGTTCGAGGTGAGAAAGCACAGAATAAA
GAGCTATGGCCCCATTTGGATTCTGATACTTCACCTGACGCCCTCCTTGCTAAGCTGAAG
GAGATGGTTCATCCATGGAGGAACCTGTATATTGCAACCAACGAGCCATTTTATAATTAT
TTTGATAAACTGAGGTCTCAATACAAGGTTCATTTGCTTGATGATTACAAGGAGTTGTGG
GGAAATACAAGTGACTGGTACAATGAAACGAGGCTTCTAAATCGGGGCCGTCCTGTTGAA
TTTGATGGATACATGAAAGTGGCAGTGGATACTGAGGTTCTTTACAGAGCAAAAACACGG
GTGGAAACATTCTATAACTTGACCAAGGATTGCAAGGATGGTATTAATACGTGCTGA

Peptide Sequence

PEP ID

VIT_06s0004g00600.t01
PEP Infomation

pep chromosome:12X:6:765694:767656:-1 gene:VIT_06s0004g00600 transcript:VIT_06s0004g00600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKEDSNLTEPIGQNLIKVISNVCFSVFVFAVLIFTVIAITYQPPDPWLESSPALTKLFTQ
FHNATFQNDNSVLKTGEDLPDFGVAETPAVAPAVMPITEAVIEEKEERVTNMSLKSDCDL
TGPVNCSDPRVLIAIERFNLRFFKAIVFLEYQTPVSGSAPNECDVSWRFRNKKEKSWRKY
RDFRRFRIGVGENCTYRVTGANGWHSGVNARRQRSRVNATRSGGGIGRIAPPVRDEEIND
TIPVLGSEMTFRKGKYLYYSRGGDYCKGMNHFLWSFLCGLGEAQYLNRTFVMDLSICLAA
TYNPSNKDEEGKDFRYYFDFEHLKEVASIVEEGEFLRDWKKWDHSRKRKVPVRKVATYKV
TPMQLSKDRSTIIYRQFDAPEPENYWYRVCEGQAAKYIQRPWHALWKSKRLMNIVTEISG
RMDWDFDAVHVVRGEKAQNKELWPHLDSDTSPDALLAKLKEMVHPWRNLYIATNEPFYNY
FDKLRSQYKVHLLDDYKELWGNTSDWYNETRLLNRGRPVEFDGYMKVAVDTEVLYRAKTR
VETFYNLTKDCKDGINTC

Transcript Sequence

Transcript ID

VIT_06s0004g00600.t01
Transcript Infomation

cdna chromosome:12X:6:765694:767656:-1 gene:VIT_06s0004g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAACCATCCATCTCCAATCACTCCCATGGCTTCAACTCCAATTCATCTACGCATCTGAG
GTAAGCAAACCCTTACCCTAGCTCTCTCTTTCTGCTCTAAGATTCATTCTTTGATAGAAT
CTCATATCCTAGGGTTTCTCCGAGCGAAAACCCCCATGAAAGAAGACTCCAATTTGACTG
AGCCCATTGGGCAAAACCTAATCAAAGTGATTAGCAATGTCTGCTTCTCAGTCTTCGTCT
TCGCTGTTCTCATCTTCACTGTAATTGCAATCACCTACCAGCCTCCAGATCCATGGCTGG
AATCCTCACCGGCCCTCACCAAACTCTTCACCCAATTCCACAACGCCACCTTCCAGAACG
ACAATTCCGTCCTTAAAACCGGCGAGGATTTGCCTGATTTCGGGGTCGCTGAGACCCCCG
CGGTTGCTCCGGCCGTCATGCCGATCACCGAGGCGGTGATTGAGGAGAAGGAGGAGAGGG
TGACCAATATGTCATTGAAATCGGATTGTGATCTGACAGGGCCGGTGAATTGTTCGGACC
CTCGTGTTTTGATTGCTATCGAGAGGTTCAACTTGAGGTTTTTTAAGGCAATTGTGTTTT
TGGAGTATCAGACACCGGTGAGCGGATCGGCTCCAAATGAGTGTGATGTGTCGTGGAGGT
TTCGGAACAAGAAGGAGAAATCATGGCGGAAGTATAGGGATTTTAGGAGGTTTAGGATTG
GTGTAGGTGAGAATTGCACGTATCGTGTGACTGGTGCAAATGGTTGGCATTCCGGTGTCA
ATGCTCGGCGGCAAAGGAGTAGAGTTAATGCCACGAGGAGTGGTGGGGGCATTGGTAGAA
TTGCCCCACCAGTCCGTGATGAAGAGATCAATGATACGATCCCAGTTTTGGGATCAGAGA
TGACTTTTCGGAAGGGGAAGTACTTGTATTATTCACGTGGAGGGGATTATTGTAAAGGGA
TGAATCATTTTCTTTGGAGTTTCTTGTGTGGCCTTGGGGAGGCTCAGTATTTGAACAGGA
CATTTGTGATGGATTTGAGTATCTGTTTGGCAGCAACGTATAATCCAAGTAATAAGGATG
AGGAAGGAAAGGATTTTCGGTATTATTTTGATTTCGAGCATCTTAAGGAGGTGGCATCAA
TCGTTGAGGAGGGAGAGTTTTTGAGAGATTGGAAAAAGTGGGATCATTCGCGGAAAAGGA
AAGTTCCAGTTAGAAAGGTTGCGACCTATAAGGTTACACCAATGCAACTAAGTAAGGATA
GGAGCACAATTATCTATAGGCAGTTTGATGCACCGGAGCCAGAAAATTATTGGTATAGAG
TATGTGAAGGGCAAGCTGCAAAGTATATTCAGAGGCCATGGCATGCACTGTGGAAATCAA
AACGGTTGATGAATATTGTTACAGAGATCAGTGGGCGAATGGACTGGGATTTTGATGCAG
TCCATGTGGTTCGAGGTGAGAAAGCACAGAATAAAGAGCTATGGCCCCATTTGGATTCTG
ATACTTCACCTGACGCCCTCCTTGCTAAGCTGAAGGAGATGGTTCATCCATGGAGGAACC
TGTATATTGCAACCAACGAGCCATTTTATAATTATTTTGATAAACTGAGGTCTCAATACA
AGGTTCATTTGCTTGATGATTACAAGGAGTTGTGGGGAAATACAAGTGACTGGTACAATG
AAACGAGGCTTCTAAATCGGGGCCGTCCTGTTGAATTTGATGGATACATGAAAGTGGCAG
TGGATACTGAGGTTCTTTACAGAGCAAAAACACGGGTGGAAACATTCTATAACTTGACCA
AGGATTGCAAGGATGGTATTAATACGTGCTGACCAGGTTGGGGATGCCATTTATTGCTTT
TAGTTCTTCATTCAGTTTTGGGATGATATTGCTGGGTTCATTTCAGTCTTCTTGTAATAG
CACTTTGTTCTTTTATATGTTGATTGGCAATTTCCAGTGCCCA