Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g00360.t01
CDS Infomation

cds chromosome:12X:6:490414:492859:1 gene:VIT_06s0004g00360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCCGCCGCTCGCCCTCTCGTCACCGTTCAGGTGCTCAAGTCGGATATGGCCACA
GACGGCGGCAACGCAGTCCCTCTCCCGGATGTCATGAAGGCCTCCATCCGGCCAGACATC
GTCAACTTCGTCCACTCCAACATCTCCAAAAATAGCCGCCAACCCTACGCCGTTAGCCGT
CGCGCTGGTCATCAGACCTCCGCCGAGTCCTGGGGTACTGGCCGCGCCGTCTCCCGTATC
CCTCGTGTTCCGGGTGGTGGTACTCACCGCGCTGGCCAGGGTGCCTTCGGAAACATGTGC
CGTGGCGGTAGGATGTTCGCCCCCACCAAGATCTGGCGCCGCTGGCACCGCAAGATCAAC
GTCAACCAGAAGCGGTACGCAGTGGTTTCCGCCATCGCCGCCTCAGCCGTCCCCTCACTC
GTGATGGCTCGTGGGCACAGGATTGAATCCGTCCCGGAGCTTCCTCTGGTGATCGGAGAT
TCGGCCGAGAGCGTCGAGAAAACATCGGCGGCGATTGATATTCTGAAGCAAGTTGGCGCT
TATCCTGATGCAGAGAAGGCGAAAGACAGCCATGGTATTCGTCCCGGAAAGGGTAAGATG
AGGAACCGCCGCTACATTTCAAGGAAGGGTCCGTTGATCGTCTACGGCACGGAGGGTGCG
AAGCTTGTAAAGGCTTTCCGGAACATTCCTGGGGTTGAGGTTGCTAACGTCGAGCGGCTC
AATCTTCTGAAACTCGCTCCCGGTGGCCATCTTGGAAGGTTCATTATCTGGACCAAATCG
GCAATTGAGAAGGTGGATTCAATCTATGGATCCTTTGATAAGACATCGGAGAAGAAGAAG
GGATACCTCCTGCCACGCGCAAAGATGGTAAATGCTGATTTGGCTAGGATCATCAACTCG
GACGAGGTTCAGTCTGTGGTGAGGCCAATCAAGAAGGAGGTGAAGAGGGCACCAATGAAG
AAGAACCCGCTCAAGAACTTGAATACAATGTTGAAGCTGAATCCATATGCCAAGACTGCA
AGGAGGATGGCTCTTCTGGCCGAGGCACAACGGGTCAAGGCCAAGAAGGAGAAGCTTGAC
AAGAAAAGGGCACAAATTCCTAAGGAAGAGGCAGCGGCTATCAAAGCTGCAGGCAAGGCC
TGGTACCAGACAATGATCTCAGATAGCGACTACACGGAATTTGACAACTTCTCAAAGTGG
CTTGGTGTCTCACAGTAA

Peptide Sequence

PEP ID

VIT_06s0004g00360.t01
PEP Infomation

pep chromosome:12X:6:490414:492859:1 gene:VIT_06s0004g00360 transcript:VIT_06s0004g00360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAAARPLVTVQVLKSDMATDGGNAVPLPDVMKASIRPDIVNFVHSNISKNSRQPYAVSR
RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
VNQKRYAVVSAIAASAVPSLVMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQVGA
YPDAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERL
NLLKLAPGGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNADLARIINS
DEVQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKKEKLD
KKRAQIPKEEAAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ

Transcript Sequence

Transcript ID

VIT_06s0004g00360.t01
Transcript Infomation

cdna chromosome:12X:6:490414:492859:1 gene:VIT_06s0004g00360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCACACACCCCCAGCAATGGCTGCCGCCGCTCGCCCTCTCGTCACCGTTCAGGTGCTCAA
GTCGGATATGGCCACAGACGGCGGCAACGCAGTCCCTCTCCCGGATGTCATGAAGGCCTC
CATCCGGCCAGACATCGTCAACTTCGTCCACTCCAACATCTCCAAAAATAGCCGCCAACC
CTACGCCGTTAGCCGTCGCGCTGGTCATCAGACCTCCGCCGAGTCCTGGGGTACTGGCCG
CGCCGTCTCCCGTATCCCTCGTGTTCCGGGTGGTGGTACTCACCGCGCTGGCCAGGGTGC
CTTCGGAAACATGTGCCGTGGCGGTAGGATGTTCGCCCCCACCAAGATCTGGCGCCGCTG
GCACCGCAAGATCAACGTCAACCAGAAGCGGTACGCAGTGGTTTCCGCCATCGCCGCCTC
AGCCGTCCCCTCACTCGTGATGGCTCGTGGGCACAGGATTGAATCCGTCCCGGAGCTTCC
TCTGGTGATCGGAGATTCGGCCGAGAGCGTCGAGAAAACATCGGCGGCGATTGATATTCT
GAAGCAAGTTGGCGCTTATCCTGATGCAGAGAAGGCGAAAGACAGCCATGGTATTCGTCC
CGGAAAGGGTAAGATGAGGAACCGCCGCTACATTTCAAGGAAGGGTCCGTTGATCGTCTA
CGGCACGGAGGGTGCGAAGCTTGTAAAGGCTTTCCGGAACATTCCTGGGGTTGAGGTTGC
TAACGTCGAGCGGCTCAATCTTCTGAAACTCGCTCCCGGTGGCCATCTTGGAAGGTTCAT
TATCTGGACCAAATCGGCAATTGAGAAGGTGGATTCAATCTATGGATCCTTTGATAAGAC
ATCGGAGAAGAAGAAGGGATACCTCCTGCCACGCGCAAAGATGGTAAATGCTGATTTGGC
TAGGATCATCAACTCGGACGAGGTTCAGTCTGTGGTGAGGCCAATCAAGAAGGAGGTGAA
GAGGGCACCAATGAAGAAGAACCCGCTCAAGAACTTGAATACAATGTTGAAGCTGAATCC
ATATGCCAAGACTGCAAGGAGGATGGCTCTTCTGGCCGAGGCACAACGGGTCAAGGCCAA
GAAGGAGAAGCTTGACAAGAAAAGGGCACAAATTCCTAAGGAAGAGGCAGCGGCTATCAA
AGCTGCAGGCAAGGCCTGGTACCAGACAATGATCTCAGATAGCGACTACACGGAATTTGA
CAACTTCTCAAAGTGGCTTGGTGTCTCACAGTAATTTTGCCTTATGCCTTGCATGATTTC
AGACCTCTATTTTGTTAATTTTTTTGGTTTTGGTGTACTCTATTATGGCAATTTTGATTT
TGTGGGTGAGATTAGGTGGGAGGGGAATGGTTGGAATAATTGACAGACCCTTGGCCTTTC
ACTTCCCTTTTTATTCACTTTCCTGGCTTAGGTGGGTAAAGGTTTTAGTTGAAACAGAAC
TGAAGTTACAAGTAGCTTGTTTATGCTTTATGGTTTGGACATCAGGCTTATGTTACAATC
CTGCAACATCATGTTTTCAAATTTTTATGTTTTAATCTTTTTGTGCTTGCATGTGGTTGA
TGGG