Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g00240.t01
CDS Infomation

cds chromosome:12X:6:369013:374661:1 gene:VIT_06s0004g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCATCGGCTTTCACTACCATGTCTTCTGTTGGCTCCTTGGCTGCTCCTGGTGGTCGT
GGGATGGATAAGAAACTTGCAACTTCATCAGACAGATTATCATCTTTTGCTTCCATATCT
TCAAGCTCATTTGGTAGGAGACAAAATGTTGTTCTACGAAGGACACGATCTCCCAGGATC
AATGCTATGGCAAAGGATTTGTATTTCAACAAAGATGGCTCTGCTATCAAGAAGCTGCAG
ACTGGAGTAAATAAACTTGCTGATCTAGTGGGAGTTACTCTTGGTCCAAAAGGCAGGAAT
GTTGTCCTAGAGAGCAAGTATGGCTCCCCAAAAATTGTTAATGATGGTGTAACTGTGGCC
AAAGAGGTTGAGTTGGAGGATCCTGTTGAGAATATTGGTGCTAAATTAGTGAGACAAGCA
GCTGCCAAGACCAACGACTTGGCTGGGGATGGGACAACAACATCTGTTGTTCTTGCACAA
GGGCTTATTGCTGAAGGTGTCAAGGTGGTAGCAGCTGGTGCAAACCCTGTTCTAATCACT
CGAGGCATTGAGAAGACCACAAAATCTCTAGTGGCTGAGCTTAAGCTGATATCAAAAGAG
GTTGAAGACAGTGAGCTAGCAGATGTTGCAGCTGTTAGTGCAGGAAACAACCATGAAGTG
GGAAATATGATTGCCGAAGCAATGAGTAAAGTGGGTCGAAAGGGTGTGGTGACCCTTGAA
GAGGGAAAAAGTGCAGAGAACCACCTGTATGTTGTTGAAGGAATGCAATTTGACCGTGGT
TATATCTCACCTTACTTTGTCACCGATAGTGAGAAAATGGCAGTTGAATTCGAGAACTGC
AAGTTGCTTCTTGTAGACAAGAAGATAACAAATGCAAGAGATCTCATTAATGTTCTGGAA
GACGCTATTAGGGGTGGATACCCAATCTTGATAATTGCAGAAGATATTGAGCAGGAAGCT
TTGGCAACACTGGTTGTGAATAAGCTTAGAGGGTCATTAAAGATTGCTGCACTTAAAGCC
CCTGGATTTGGAGAGCGCAAGAGCCAGTACCTGGATGACATTGCAATTCTGACTGGAGGA
ACTGTAATTAGAGATGAGGTGGGGCTCACCCTAGACAAAGCTGAGAAGGAGGTTTTAGGC
CATGCTGCAAAGGTGGTGCTTACCAAGGATACAACCACCATTGTTGGAGATGGGAGCACC
CAGGAAGCAGTAAATAAGCGAGTTGCACAAATTAGAAACCTCATTGAGGCAGCAGAGCAA
GAATATGAGAAGGAAAAACTTAATGAAAGAATTGCAAAATTGTCAGGTGGTGTTGCTGTG
ATTCAGGTTGGAGCACAAACTGAGACAGAGCTTAAAGAAAAGAAACTGAGAGTAGAAGAC
GCTCTCAATGCAACGAAGGCAGCTGTTGAGGAAGGGATTGTTGTAGGTGGTGGGTGCACT
CTCCTGAGACTTGCCTCAAAGGTGGATGCCATCAAGGACACGCTTGATAATGATGAGGAA
AAGGTTGGAGCTGATATTGTCAAGAGAGCTTTGAGTTACCCTCTGAAGTTAATTGCCAAA
AATGCTGGTGTTAATGGAAGTGTGGTCAGTGAGAAGGTGCTCTCCAGTGACAATCCAAAA
TATGGGTTCAATGCTGCAACAGGAAAATATGAAGATCTAATGGCTGCTGGAATAATTGAC
CCTACTAAGGTGGTGAGGTGTTGCCTGGAGCATGCATCATCAGTGGCCAAAACTTTCTTG
ATGTCAGATTGTGTAGTGGTGGAAATCAAAGAGCCTGAACCAGTGGTTGCAGGAAATCCC
ATGGACAATTCAGGTTATGGATACTAG

Peptide Sequence

PEP ID

VIT_06s0004g00240.t01
PEP Infomation

pep chromosome:12X:6:369013:374661:1 gene:VIT_06s0004g00240 transcript:VIT_06s0004g00240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASAFTTMSSVGSLAAPGGRGMDKKLATSSDRLSSFASISSSSFGRRQNVVLRRTRSPRI
NAMAKDLYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA
KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
RGIEKTTKSLVAELKLISKEVEDSELADVAAVSAGNNHEVGNMIAEAMSKVGRKGVVTLE
EGKSAENHLYVVEGMQFDRGYISPYFVTDSEKMAVEFENCKLLLVDKKITNARDLINVLE
DAIRGGYPILIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGG
TVIRDEVGLTLDKAEKEVLGHAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLIEAAEQ
EYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
LLRLASKVDAIKDTLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPK
YGFNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVVAGNP
MDNSGYGY

Transcript Sequence

Transcript ID

VIT_06s0004g00240.t01
Transcript Infomation

cdna chromosome:12X:6:369013:374661:1 gene:VIT_06s0004g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATAGTAGTCGCTTCAGATATACCTGCGCACCCCCGGCGCCCCTTATCCATACCCCTCTTA
AACCCTAGCTTCTCTTCCGTTTTTAAGGAGTAAATGGCATCGGCTTTCACTACCATGTCT
TCTGTTGGCTCCTTGGCTGCTCCTGGTGGTCGTGGGATGGATAAGAAACTTGCAACTTCA
TCAGACAGATTATCATCTTTTGCTTCCATATCTTCAAGCTCATTTGGTAGGAGACAAAAT
GTTGTTCTACGAAGGACACGATCTCCCAGGATCAATGCTATGGCAAAGGATTTGTATTTC
AACAAAGATGGCTCTGCTATCAAGAAGCTGCAGACTGGAGTAAATAAACTTGCTGATCTA
GTGGGAGTTACTCTTGGTCCAAAAGGCAGGAATGTTGTCCTAGAGAGCAAGTATGGCTCC
CCAAAAATTGTTAATGATGGTGTAACTGTGGCCAAAGAGGTTGAGTTGGAGGATCCTGTT
GAGAATATTGGTGCTAAATTAGTGAGACAAGCAGCTGCCAAGACCAACGACTTGGCTGGG
GATGGGACAACAACATCTGTTGTTCTTGCACAAGGGCTTATTGCTGAAGGTGTCAAGGTG
GTAGCAGCTGGTGCAAACCCTGTTCTAATCACTCGAGGCATTGAGAAGACCACAAAATCT
CTAGTGGCTGAGCTTAAGCTGATATCAAAAGAGGTTGAAGACAGTGAGCTAGCAGATGTT
GCAGCTGTTAGTGCAGGAAACAACCATGAAGTGGGAAATATGATTGCCGAAGCAATGAGT
AAAGTGGGTCGAAAGGGTGTGGTGACCCTTGAAGAGGGAAAAAGTGCAGAGAACCACCTG
TATGTTGTTGAAGGAATGCAATTTGACCGTGGTTATATCTCACCTTACTTTGTCACCGAT
AGTGAGAAAATGGCAGTTGAATTCGAGAACTGCAAGTTGCTTCTTGTAGACAAGAAGATA
ACAAATGCAAGAGATCTCATTAATGTTCTGGAAGACGCTATTAGGGGTGGATACCCAATC
TTGATAATTGCAGAAGATATTGAGCAGGAAGCTTTGGCAACACTGGTTGTGAATAAGCTT
AGAGGGTCATTAAAGATTGCTGCACTTAAAGCCCCTGGATTTGGAGAGCGCAAGAGCCAG
TACCTGGATGACATTGCAATTCTGACTGGAGGAACTGTAATTAGAGATGAGGTGGGGCTC
ACCCTAGACAAAGCTGAGAAGGAGGTTTTAGGCCATGCTGCAAAGGTGGTGCTTACCAAG
GATACAACCACCATTGTTGGAGATGGGAGCACCCAGGAAGCAGTAAATAAGCGAGTTGCA
CAAATTAGAAACCTCATTGAGGCAGCAGAGCAAGAATATGAGAAGGAAAAACTTAATGAA
AGAATTGCAAAATTGTCAGGTGGTGTTGCTGTGATTCAGGTTGGAGCACAAACTGAGACA
GAGCTTAAAGAAAAGAAACTGAGAGTAGAAGACGCTCTCAATGCAACGAAGGCAGCTGTT
GAGGAAGGGATTGTTGTAGGTGGTGGGTGCACTCTCCTGAGACTTGCCTCAAAGGTGGAT
GCCATCAAGGACACGCTTGATAATGATGAGGAAAAGGTTGGAGCTGATATTGTCAAGAGA
GCTTTGAGTTACCCTCTGAAGTTAATTGCCAAAAATGCTGGTGTTAATGGAAGTGTGGTC
AGTGAGAAGGTGCTCTCCAGTGACAATCCAAAATATGGGTTCAATGCTGCAACAGGAAAA
TATGAAGATCTAATGGCTGCTGGAATAATTGACCCTACTAAGGTGGTGAGGTGTTGCCTG
GAGCATGCATCATCAGTGGCCAAAACTTTCTTGATGTCAGATTGTGTAGTGGTGGAAATC
AAAGAGCCTGAACCAGTGGTTGCAGGAAATCCCATGGACAATTCAGGTTATGGATACTAG
GTTGTGACAACCCAGCAGAATGATGATAGGCACTTGGTTTTAATTTTTCACCTCTTTATT
TTTGGGGTAGAATTGAATGGTTTTATGGTGGTAGAAAATATAACTCCAGGTGAGATTGGG
TCGCCGGAGTTCGGCTTGTATCGACTTGCAATTCAGTGTATAAGGTTATAAAAACCATTT
TTGCATA