Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g00200.t01
CDS Infomation

cds chromosome:12X:6:326435:331213:-1 gene:VIT_06s0004g00200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGCTGTTGCTCCTCCTGCGGATCAAGCTGCAGAGTTGCTTCAGAAATTGTCATTG
GATTCTCAAACCAAAACTTTGGAAATCCCTGAGCCAACTAAAAAGCCTTCTGGTAATCAA
TTTGGGGCTGTTGATGGGGGTGATGCTGCAAATGGTCAGAACCAGTCATGTGAGAGGTCT
GTGACCCCATTACTACAGGAATTTATGGATCCATCCGTGTGCTATGTCCCTAATGGCTAT
TCATCATATTATTATGGAGGTTATGATGGAACTACAAATGAGTGGGAAGACTATTCCAGA
TATATGAATCCAGAGGGAGTTGAGATGCCTGCCGGAGTTTATGGGGATAATGGATCACTC
ATGTATCACCATGGATATGGATATGCACCTTATGGCCCATATCCACCAGCCGGTTCCCCA
GTTCCAACTGTTGGACATGATGGTCAGCTATATGGGCCTCAGCACTACCAGTATCCCGCC
CCATACTTTCAGCCACCTACTCCAACCAGTGGACCTTACAACCCTAGTCCAGGTGCCCCT
CCCCCGGGAGAGGTTACCACCTCTGTGGCTGCTGACCAAAAGCCTTTGTCTGTAGAAACT
GCTAATGGTAATTCTAATGGTATTGCAAGTGGTGGGGCTATGAAAGGGAATAATGGTTCC
GCACCTGTGAAACCAACATATCAGAACTCGCCATTTAATTCAAATGGTTCCTATGGAAGA
GGTGCATTGCCAGGGGGGGTTCCCGCTTCTGGTTATCAGGATCCAAGATTTGCTTTTGAT
GGGCTACGATCTCCTCTCCCATGGTTAGATGGCCCAGTTTTTTCTGATCCAAGGCCTGTG
ACTAGCACCTCAATCACCTCATCAATTTCAAACGCCAATAATGTTACAGCTTCGAGGAAT
CTCCGGCCACATTCTCATTTCATGGGTTTGCAACATCCAAGACCAATGTCTGGCATGGGT
ACAGCTCATGGATTTATGAATAGAATGTATCCAAACAAGTTATATGGTCAGTATGGAAAC
ACAGTTAGATCTGGTCTAGGTTTTGGATCTAATGCTTATGATTCACGAACAAATGGGCGT
AGTTGGTTGGCTGTTGATAACAAATACAAACCCAGGGGACGAGGCATTGGTTTCTTTGGT
TATGGTAACGAGAACATGGATGGTTTGAATGAGCTAAACAGGGGGCCAAGAGCCAAGAGC
TCTAAAAACCAAAAGGGGCTTGCACCAGTCACAGCCAAGGGCCAGAATGTTCAATCCAAT
GGATCTAATGATGAGGAGAAGGATAGGACTAGTGTGTTCCCTGACCGTGATCAGTACAAT
CATGCAGATTTCCCTGTGGAACATACTGAGGCTAAGTTCTTCATCATTAAGTCTTATAGT
GAAGATGATGTCCATAAGAGCATCAAGTATAATGTATGGGCCAGCACACCAAATGGCAAC
AAGAAACTTGATGCAGCTTACAGGGAAGCTCAGGAGAAATCTGCTGGCTGTCCTGTATTT
CTTTTCTTCTCGGTCAATACAAGTGGGCAATTTGTTGGCCTTGCGGAGATGGTGGGCCAT
GTTGATTTTCACAAGAATGTGGAGTACTGGCAACAAGACAAGTGGAATGGATGTTTCTCT
GTGAAGTGGCATGTTGTAAAGGATGTACCGAATAGTTTGTTGAAGCACATCACCCTTGAA
AACAATGAGAACAAACCTGTTACAAATAGTAGGGACACTCAAGAGGTTAAGTTAGAGCAG
GGGCTTCAGATGCTCAAAATATTTAAGGAACACTGCAGCAAAACGTGCATCTTGGATGAT
TTTGCATTTTATGAGTCTCGCCAGAAAACAATTCAGGAGAAAAAGGCTAAACAACAGCAG
TTTCAGAAACAGGTATGGGAAGGGAAGCCCACTGATGAGAAGAATGGGGAACTAAAACCA
CAGAAGTCATTGGAGGTTGCCTCGGATTTGATTAAGGAATCAACACCAGCTGTCCAGGCT
AATGGGGATCGGAAGGTTTTTGAAAATGGATCAGTTGCCAAATCTGGAGATGCTCCAAAG
GCTTTTAAACCGAGTATAGTGTCTGAAAAGAGGATTGTTGCCAACGGGGTTGCAAATGGG
GTGGCAAATGGTTGCTAG

Peptide Sequence

PEP ID

VIT_06s0004g00200.t01
PEP Infomation

pep chromosome:12X:6:326435:331213:-1 gene:VIT_06s0004g00200 transcript:VIT_06s0004g00200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAVAPPADQAAELLQKLSLDSQTKTLEIPEPTKKPSGNQFGAVDGGDAANGQNQSCERS
VTPLLQEFMDPSVCYVPNGYSSYYYGGYDGTTNEWEDYSRYMNPEGVEMPAGVYGDNGSL
MYHHGYGYAPYGPYPPAGSPVPTVGHDGQLYGPQHYQYPAPYFQPPTPTSGPYNPSPGAP
PPGEVTTSVAADQKPLSVETANGNSNGIASGGAMKGNNGSAPVKPTYQNSPFNSNGSYGR
GALPGGVPASGYQDPRFAFDGLRSPLPWLDGPVFSDPRPVTSTSITSSISNANNVTASRN
LRPHSHFMGLQHPRPMSGMGTAHGFMNRMYPNKLYGQYGNTVRSGLGFGSNAYDSRTNGR
SWLAVDNKYKPRGRGIGFFGYGNENMDGLNELNRGPRAKSSKNQKGLAPVTAKGQNVQSN
GSNDEEKDRTSVFPDRDQYNHADFPVEHTEAKFFIIKSYSEDDVHKSIKYNVWASTPNGN
KKLDAAYREAQEKSAGCPVFLFFSVNTSGQFVGLAEMVGHVDFHKNVEYWQQDKWNGCFS
VKWHVVKDVPNSLLKHITLENNENKPVTNSRDTQEVKLEQGLQMLKIFKEHCSKTCILDD
FAFYESRQKTIQEKKAKQQQFQKQVWEGKPTDEKNGELKPQKSLEVASDLIKESTPAVQA
NGDRKVFENGSVAKSGDAPKAFKPSIVSEKRIVANGVANGVANGC

Transcript Sequence

Transcript ID

VIT_06s0004g00200.t01
Transcript Infomation

cdna chromosome:12X:6:326435:331213:-1 gene:VIT_06s0004g00200 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCCCCCAAAAACCCAAACCCTTGGCGGCTGACCTCCCCGTTTTTCTCTCTCCTAGGGTT
TCTCTCTCTCTCTCTCTCTTCCCAAAACCCCCGCTTGATTCTCGTCATGGCTGCTGTTGC
TCCTCCTGCGGATCAAGCTGCAGAGTTGCTTCAGAAATTGTCATTGGATTCTCAAACCAA
AACTTTGGAAATCCCTGAGCCAACTAAAAAGCCTTCTGGTAATCAATTTGGGGCTGTTGA
TGGGGGTGATGCTGCAAATGGTCAGAACCAGTCATGTGAGAGGTCTGTGACCCCATTACT
ACAGGAATTTATGGATCCATCCGTGTGCTATGTCCCTAATGGCTATTCATCATATTATTA
TGGAGGTTATGATGGAACTACAAATGAGTGGGAAGACTATTCCAGATATATGAATCCAGA
GGGAGTTGAGATGCCTGCCGGAGTTTATGGGGATAATGGATCACTCATGTATCACCATGG
ATATGGATATGCACCTTATGGCCCATATCCACCAGCCGGTTCCCCAGTTCCAACTGTTGG
ACATGATGGTCAGCTATATGGGCCTCAGCACTACCAGTATCCCGCCCCATACTTTCAGCC
ACCTACTCCAACCAGTGGACCTTACAACCCTAGTCCAGGTGCCCCTCCCCCGGGAGAGGT
TACCACCTCTGTGGCTGCTGACCAAAAGCCTTTGTCTGTAGAAACTGCTAATGGTAATTC
TAATGGTATTGCAAGTGGTGGGGCTATGAAAGGGAATAATGGTTCCGCACCTGTGAAACC
AACATATCAGAACTCGCCATTTAATTCAAATGGTTCCTATGGAAGAGGTGCATTGCCAGG
GGGGGTTCCCGCTTCTGGTTATCAGGATCCAAGATTTGCTTTTGATGGGCTACGATCTCC
TCTCCCATGGTTAGATGGCCCAGTTTTTTCTGATCCAAGGCCTGTGACTAGCACCTCAAT
CACCTCATCAATTTCAAACGCCAATAATGTTACAGCTTCGAGGAATCTCCGGCCACATTC
TCATTTCATGGGTTTGCAACATCCAAGACCAATGTCTGGCATGGGTACAGCTCATGGATT
TATGAATAGAATGTATCCAAACAAGTTATATGGTCAGTATGGAAACACAGTTAGATCTGG
TCTAGGTTTTGGATCTAATGCTTATGATTCACGAACAAATGGGCGTAGTTGGTTGGCTGT
TGATAACAAATACAAACCCAGGGGACGAGGCATTGGTTTCTTTGGTTATGGTAACGAGAA
CATGGATGGTTTGAATGAGCTAAACAGGGGGCCAAGAGCCAAGAGCTCTAAAAACCAAAA
GGGGCTTGCACCAGTCACAGCCAAGGGCCAGAATGTTCAATCCAATGGATCTAATGATGA
GGAGAAGGATAGGACTAGTGTGTTCCCTGACCGTGATCAGTACAATCATGCAGATTTCCC
TGTGGAACATACTGAGGCTAAGTTCTTCATCATTAAGTCTTATAGTGAAGATGATGTCCA
TAAGAGCATCAAGTATAATGTATGGGCCAGCACACCAAATGGCAACAAGAAACTTGATGC
AGCTTACAGGGAAGCTCAGGAGAAATCTGCTGGCTGTCCTGTATTTCTTTTCTTCTCGGT
CAATACAAGTGGGCAATTTGTTGGCCTTGCGGAGATGGTGGGCCATGTTGATTTTCACAA
GAATGTGGAGTACTGGCAACAAGACAAGTGGAATGGATGTTTCTCTGTGAAGTGGCATGT
TGTAAAGGATGTACCGAATAGTTTGTTGAAGCACATCACCCTTGAAAACAATGAGAACAA
ACCTGTTACAAATAGTAGGGACACTCAAGAGGTTAAGTTAGAGCAGGGGCTTCAGATGCT
CAAAATATTTAAGGAACACTGCAGCAAAACGTGCATCTTGGATGATTTTGCATTTTATGA
GTCTCGCCAGAAAACAATTCAGGAGAAAAAGGCTAAACAACAGCAGTTTCAGAAACAGGT
ATGGGAAGGGAAGCCCACTGATGAGAAGAATGGGGAACTAAAACCACAGAAGTCATTGGA
GGTTGCCTCGGATTTGATTAAGGAATCAACACCAGCTGTCCAGGCTAATGGGGATCGGAA
GGTTTTTGAAAATGGATCAGTTGCCAAATCTGGAGATGCTCCAAAGGCTTTTAAACCGAG
TATAGTGTCTGAAAAGAGGATTGTTGCCAACGGGGTTGCAAATGGGGTGGCAAATGGTTG
CTAGCTTTACCTGGCCACAAAAGGGCGGTCCATGGTCTTCTATAGTTTCTTGCAAGAAGT
TGTATCAGAAGTTTTGCTGGTTAGATTAGAGGGCATAGGCGACTGCTAGCAAATTCTCCT
TCAGACTGGCCGCCAGAATTGGATCTGTCTTGCTGCTTCCAAGGATCAATAAAACAGAGA
TTAAAATAGCTCTTCAGATTTTTCAGGTGTGGCAAGGCAGGCTATGCTTCACAGAATCCC
AGTACCAAAGCCCATTTTTCTTTATCATGGGTCTGTTGTTATAGTTGTTAGCCCCTAACA
GGTTTTCTTCCTTAGGAGTTTGGGTTTAGGGTTTCTCTTTTGGTGGCTTTATATCCTTAT
TGCTCTTTTTTTTTTCTTTTTTCTTTTTTCTTTTTTTTTTCCCCTTTTTTGCCCTTTTTT
CCTTTTACCTTTTCTTCTTTTTCCTGTTCTGCCTTTTTCCCATCTTGTAAATCTAGTTCT
ACTGTGGGCCAGCCGTTGCTTTTGAATTGTAAGAGAGCTAGAGGCAGGGTGGGAAAAGTA
TTGCAATATAGTTGGGTTTTAAGAAGCTTTTCATTTCAACTTCAGTCAATGTTTTAGTCT
TGTTACTACCATTATTGCTATAACATCAATCTTATGTTTTTGTTGTCTTAATACAGGGTA
AATTTTATCTTGC