Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g00140.t01
CDS Infomation

cds chromosome:12X:6:264400:274920:-1 gene:VIT_06s0004g00140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGATATATATAGTTATTCACAACCTCTTCTTGATTTTGGGAGTGTTATTTATATCT
CAGATAGGTAGATCAGCATCAAAATCTCTGCTTTCCACAAACCCATTTCTGGGAATTGCT
CCTCAAGATGAGAACTACTACAAGACTTCATCAGAGATATTCAAATGCAAAGATGGATCA
AAGAAATTGAACAGAGCACAGGTCAATGACGACTTCTGCGATTGCCCTGATGCCTCCGAT
GAGCCTGGAACTTCGGCATGCCCGGGTGGAAAATTCTATTGTCGGAATGCAGGACATGTT
CCTCTGTTGTTATTTTCCTCTAGAGTGAACGATGGTATCTGCGATTGCTGCGATGGGAGT
GATGAGTATGATGGTAAAGTAAAATGTCCAAACACATGTTGGGAGGCTGGAAAAGTGGCC
AGAGATAAGTTAAAGAAAAAGATTGTAACATATAAAGAAGGAGTCACTCTACGGAAGCAA
CAGATTGAGCAAGCAAAACTGGCAATAGCTAAAGAGGAGGAAGAATTATCAAAGCTAAAA
AGTGAAGAGAAAATATTGAAAGGGCTTGTTCAGCAGCTCAAGGACCGTAAAGAACAGATA
GAGAAGGCAGAGGAGAAAGAGCGCCTACAGAAAGAAGAAGAAGAGAAGAAGCGGAGAGAG
GCTGAGGAGGAAGCTAATAAGGAGAAAAGCAAAGCTGAGAAGGAAGCTAATCAGGAGAAA
AATGAAGTTAAGGAGCAAGTTGGCAGTGAAGAAGAACCTATGGAAAGTACCCATGATGAT
AAAATTGGAGTTTTGGATCAGGATGTAGAAGAGGACAAAAGCAACTCAGTAGCTGAAGTT
GAGCATACTGATAAATCTGAAAATGCATCTCCAACTGATGGAATTGAGCAGCATGCAGCA
GAAGGCAAGGAAGAGTCCCCAGTCGTACATGAAACTGACCTTCATGCTGGAAATGAGGTG
TCTCCAACTTCCGATCAAGCTACAAAACAGGAGAATGATGTAGCTGAAAATACTGAGGGA
TTGTCAAGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGGGAAAATACTGGG
CAGCACACTGAGGAAGTTGATGCTGTGAAACATGATCATCATGAAAGCCACGAAGAGACA
CCAGAGGACACACATGCTGAGGAATATGACGGCTATGCATCAGAAACCGATGATGACAGC
CAAAGATATGACAATGATGATATGGAAGATCCAGTTGATGAAGATTTTGGAGAGGATGAT
CACTATGATTCAAGCCCTCCATACAAATCTGACACAGAAGATGAATCAGATTTTTCAGAT
ATAACAAGCACAAGTAACCCATCGTGGTTGGAGAAGATACAACAAACAGTGCGGAACATT
CTAAATGCTGTTAACTTGTTCCAGACCCCAGTAGATAAATCAGAGGCTGCTCACATACGC
AAGGAATATGACGAGTCCAGTGCCAAGTTGTCTAAGATGCAGTCTAGAATATCAAGTTTG
ACACAAAAGCTAAAGCATGATTTTGGGCCTGAGAAGGAATTCTATTCATTCTATGATCAA
TGTTTTGAGAGCAAGGAGAACAAGTATGTATACAAATTATGCCCATTTAAACAAGCTTCC
CAGGAGGAGGGCCATAGTACTACTCGTTTGGGGCGCTGGGATAAATTTGAAGATTCATAC
AGAACTATGCTGTTTTCAAATGGCGAAAAATGCTGGAATGGACCTGATAGGAGTTTGAAG
GTCAAGCTAAGATGTGGGTTGAAAAATGAGGTTACTGATGTTGATGAACCAAGCAGATGC
GAATATGTGGCATTGTTATCCACCCCAGCTCTTTGCCTAGAAGAAAAGCTGAAGGAACTA
CAACAGAAACTAGAGTTGATGAACCAGGAACAACCTCAGGGCCGTGATGAACTCTAA

Peptide Sequence

PEP ID

VIT_06s0004g00140.t01
PEP Infomation

pep chromosome:12X:6:264400:274920:-1 gene:VIT_06s0004g00140 transcript:VIT_06s0004g00140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKIYIVIHNLFLILGVLFISQIGRSASKSLLSTNPFLGIAPQDENYYKTSSEIFKCKDGS
KKLNRAQVNDDFCDCPDASDEPGTSACPGGKFYCRNAGHVPLLLFSSRVNDGICDCCDGS
DEYDGKVKCPNTCWEAGKVARDKLKKKIVTYKEGVTLRKQQIEQAKLAIAKEEEELSKLK
SEEKILKGLVQQLKDRKEQIEKAEEKERLQKEEEEKKRREAEEEANKEKSKAEKEANQEK
NEVKEQVGSEEEPMESTHDDKIGVLDQDVEEDKSNSVAEVEHTDKSENASPTDGIEQHAA
EGKEESPVVHETDLHAGNEVSPTSDQATKQENDVAENTEGLSREELGRLVASRWTGENTG
QHTEEVDAVKHDHHESHEETPEDTHAEEYDGYASETDDDSQRYDNDDMEDPVDEDFGEDD
HYDSSPPYKSDTEDESDFSDITSTSNPSWLEKIQQTVRNILNAVNLFQTPVDKSEAAHIR
KEYDESSAKLSKMQSRISSLTQKLKHDFGPEKEFYSFYDQCFESKENKYVYKLCPFKQAS
QEEGHSTTRLGRWDKFEDSYRTMLFSNGEKCWNGPDRSLKVKLRCGLKNEVTDVDEPSRC
EYVALLSTPALCLEEKLKELQQKLELMNQEQPQGRDEL

Transcript Sequence

Transcript ID

VIT_06s0004g00140.t01
Transcript Infomation

cdna chromosome:12X:6:264400:274920:-1 gene:VIT_06s0004g00140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGGGGGAAAGGGTTGTAGAATTGCTGCCTCTGTCGACAAGTTGGTGGAGGTTTCTACGA
GAAGAATGAAGATATATATAGTTATTCACAACCTCTTCTTGATTTTGGGAGTGTTATTTA
TATCTCAGATAGGTAGATCAGCATCAAAATCTCTGCTTTCCACAAACCCATTTCTGGGAA
TTGCTCCTCAAGATGAGAACTACTACAAGACTTCATCAGAGATATTCAAATGCAAAGATG
GATCAAAGAAATTGAACAGAGCACAGGTCAATGACGACTTCTGCGATTGCCCTGATGCCT
CCGATGAGCCTGGAACTTCGGCATGCCCGGGTGGAAAATTCTATTGTCGGAATGCAGGAC
ATGTTCCTCTGTTGTTATTTTCCTCTAGAGTGAACGATGGTATCTGCGATTGCTGCGATG
GGAGTGATGAGTATGATGGTAAAGTAAAATGTCCAAACACATGTTGGGAGGCTGGAAAAG
TGGCCAGAGATAAGTTAAAGAAAAAGATTGTAACATATAAAGAAGGAGTCACTCTACGGA
AGCAACAGATTGAGCAAGCAAAACTGGCAATAGCTAAAGAGGAGGAAGAATTATCAAAGC
TAAAAAGTGAAGAGAAAATATTGAAAGGGCTTGTTCAGCAGCTCAAGGACCGTAAAGAAC
AGATAGAGAAGGCAGAGGAGAAAGAGCGCCTACAGAAAGAAGAAGAAGAGAAGAAGCGGA
GAGAGGCTGAGGAGGAAGCTAATAAGGAGAAAAGCAAAGCTGAGAAGGAAGCTAATCAGG
AGAAAAATGAAGTTAAGGAGCAAGTTGGCAGTGAAGAAGAACCTATGGAAAGTACCCATG
ATGATAAAATTGGAGTTTTGGATCAGGATGTAGAAGAGGACAAAAGCAACTCAGTAGCTG
AAGTTGAGCATACTGATAAATCTGAAAATGCATCTCCAACTGATGGAATTGAGCAGCATG
CAGCAGAAGGCAAGGAAGAGTCCCCAGTCGTACATGAAACTGACCTTCATGCTGGAAATG
AGGTGTCTCCAACTTCCGATCAAGCTACAAAACAGGAGAATGATGTAGCTGAAAATACTG
AGGGATTGTCAAGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGGGAAAATA
CTGGGCAGCACACTGAGGAAGTTGATGCTGTGAAACATGATCATCATGAAAGCCACGAAG
AGACACCAGAGGACACACATGCTGAGGAATATGACGGCTATGCATCAGAAACCGATGATG
ACAGCCAAAGATATGACAATGATGATATGGAAGATCCAGTTGATGAAGATTTTGGAGAGG
ATGATCACTATGATTCAAGCCCTCCATACAAATCTGACACAGAAGATGAATCAGATTTTT
CAGATATAACAAGCACAAGTAACCCATCGTGGTTGGAGAAGATACAACAAACAGTGCGGA
ACATTCTAAATGCTGTTAACTTGTTCCAGACCCCAGTAGATAAATCAGAGGCTGCTCACA
TACGCAAGGAATATGACGAGTCCAGTGCCAAGTTGTCTAAGATGCAGTCTAGAATATCAA
GTTTGACACAAAAGCTAAAGCATGATTTTGGGCCTGAGAAGGAATTCTATTCATTCTATG
ATCAATGTTTTGAGAGCAAGGAGAACAAGTATGTATACAAATTATGCCCATTTAAACAAG
CTTCCCAGGAGGAGGGCCATAGTACTACTCGTTTGGGGCGCTGGGATAAATTTGAAGATT
CATACAGAACTATGCTGTTTTCAAATGGCGAAAAATGCTGGAATGGACCTGATAGGAGTT
TGAAGGTCAAGCTAAGATGTGGGTTGAAAAATGAGGTTACTGATGTTGATGAACCAAGCA
GATGCGAATATGTGGCATTGTTATCCACCCCAGCTCTTTGCCTAGAAGAAAAGCTGAAGG
AACTACAACAGAAACTAGAGTTGATGAACCAGGAACAACCTCAGGGCCGTGATGAACTCT
AATCTGTCTGGGATGGAATGGATTTACCCCAGACTTTTGCTGACTGCTTAAATTGATTCA
TCATTGCCCATCTTGAAAGATAAAAGAGACACATATTGGCAGCCCTTCTGAGCAAGGTTG
GCTGAAGAAATTTGAAGCAAAAGATTTGAAGTGGATCCTGGAATTTTAATGTTACTGGAG
CTCGCTTGATATTGAGGCTTTGGAGTAGTGGTGAGAGTCAAGCTCAGCTAACCTGATCTT
GATGTTCTTCACACTGTTCTAATCTTTTCGAATTGAGTTTAGAATAATGACATAGTAATC
AAACAATTAAAGGGCAGAAATGTTTATTGGGACTCTTTATCAAATA