Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g00120.t01
CDS Infomation

cds chromosome:12X:6:257501:259353:1 gene:VIT_06s0004g00120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGACGCAATGGGAGGAAGATACTGGTGCCATAGTTGCTCACAAGTGGTGAATCCC
ATCGCTGAAGCAGAGCCCAAGTGCCCCTTGTGTCAAGATGGATTCATTGAGGACATCGAT
GGCACTGCTTCAAGGGATCATAATGACTCCGACTCTGATCTAGCTTCCGATCGAACCCTC
TCTCTTTGGGCCCCAATCTTGTTGGGCATGATGGGTAATCCTCGTCGGCGCCGCAGATTC
AGAAGAGAAGATATAGAAGATGAGGAGGAGGACAATGAAGATGGTGAGGGTCGTAGAGGA
GGAGAGACTGAACTTGATCGGGAACTTGATTCCATAATCAGGAGGAGAAGGAGAAGTTCT
GCTACTATTCTCCAACTACTTCAAGGCATTAGAGCTGGAATGGTCTCTGAATCAGAGAAT
TCTGAAAATGATAGGGATAGGGATAGGGATAGAGAAAGAGAAAGGGAAAGAGAGCGCCTG
ATTCTAATAAATCCTTTCAATCAAACTATAATTGTTCAGGGTTCTTTTGATTCAAACCAG
GCCCAAAATCAGAATCAAAACACCATTGGCTCCCTGGGGGACTATTTCATTGGCCCCAGT
TTAGATTTGTTGCTGCAACATTTAGCAGAAAATGATCCTAATAGATATGGGACACCACCG
GCGCAAAAAGATGCAATTGAAGCAATGCCCACTGTGAAAATTAAGGAGAATTTGCAGTGT
TCAGTGTGTTTGGATGACTTTGAGATTGGCGCTGAGGCAAGGGAGATGCCATGTAAGCAT
AAATTCCACAGTGGGTGTATTCTGCCATGGCTGGAGCTTCATAGCTCTTGTCCAGTCTGC
AGGTTTCAGATAGCAGCTGATGAATCCAAGCTTGATTCAGATGCTTCTCCGAATGTTAGC
AGTAACAGTAGCGAGAGGAGTAACAATGGCCATGGTAGCAGTGAAGAGGGAGATGGGGAT
GGGAGAAGTGGAAATGGCAGAAGGTCTACGTTCAGGTGGCCTTTTACCAGTTTATTTTCT
TCCCAAGGATCACAAACTAGCAATGGGAATTCCTCATCATCAGGAGCAAATGCACCAGGG
AGTGCATCTAGGGCGAATGAGAATTGA

Peptide Sequence

PEP ID

VIT_06s0004g00120.t01
PEP Infomation

pep chromosome:12X:6:257501:259353:1 gene:VIT_06s0004g00120 transcript:VIT_06s0004g00120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEDAMGGRYWCHSCSQVVNPIAEAEPKCPLCQDGFIEDIDGTASRDHNDSDSDLASDRTL
SLWAPILLGMMGNPRRRRRFRREDIEDEEEDNEDGEGRRGGETELDRELDSIIRRRRRSS
ATILQLLQGIRAGMVSESENSENDRDRDRDRERERERERLILINPFNQTIIVQGSFDSNQ
AQNQNQNTIGSLGDYFIGPSLDLLLQHLAENDPNRYGTPPAQKDAIEAMPTVKIKENLQC
SVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRFQIAADESKLDSDASPNVS
SNSSERSNNGHGSSEEGDGDGRSGNGRRSTFRWPFTSLFSSQGSQTSNGNSSSSGANAPG
SASRANEN

Transcript Sequence

Transcript ID

VIT_06s0004g00120.t01
Transcript Infomation

cdna chromosome:12X:6:257501:259353:1 gene:VIT_06s0004g00120 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTCCAGCTGATTTTGTGGTGACTGCTGTTTGGATCGATCGCTTCATCTTGCGAGCTCT
TCTTTCGTTTCAGATAAAAGGGGGTGTTTGGAAAGAGGGAATAAAATGGAGGACGCAATG
GGAGGAAGATACTGGTGCCATAGTTGCTCACAAGTGGTGAATCCCATCGCTGAAGCAGAG
CCCAAGTGCCCCTTGTGTCAAGATGGATTCATTGAGGACATCGATGGCACTGCTTCAAGG
GATCATAATGACTCCGACTCTGATCTAGCTTCCGATCGAACCCTCTCTCTTTGGGCCCCA
ATCTTGTTGGGCATGATGGGTAATCCTCGTCGGCGCCGCAGATTCAGAAGAGAAGATATA
GAAGATGAGGAGGAGGACAATGAAGATGGTGAGGGTCGTAGAGGAGGAGAGACTGAACTT
GATCGGGAACTTGATTCCATAATCAGGAGGAGAAGGAGAAGTTCTGCTACTATTCTCCAA
CTACTTCAAGGCATTAGAGCTGGAATGGTCTCTGAATCAGAGAATTCTGAAAATGATAGG
GATAGGGATAGGGATAGAGAAAGAGAAAGGGAAAGAGAGCGCCTGATTCTAATAAATCCT
TTCAATCAAACTATAATTGTTCAGGGTTCTTTTGATTCAAACCAGGCCCAAAATCAGAAT
CAAAACACCATTGGCTCCCTGGGGGACTATTTCATTGGCCCCAGTTTAGATTTGTTGCTG
CAACATTTAGCAGAAAATGATCCTAATAGATATGGGACACCACCGGCGCAAAAAGATGCA
ATTGAAGCAATGCCCACTGTGAAAATTAAGGAGAATTTGCAGTGTTCAGTGTGTTTGGAT
GACTTTGAGATTGGCGCTGAGGCAAGGGAGATGCCATGTAAGCATAAATTCCACAGTGGG
TGTATTCTGCCATGGCTGGAGCTTCATAGCTCTTGTCCAGTCTGCAGGTTTCAGATAGCA
GCTGATGAATCCAAGCTTGATTCAGATGCTTCTCCGAATGTTAGCAGTAACAGTAGCGAG
AGGAGTAACAATGGCCATGGTAGCAGTGAAGAGGGAGATGGGGATGGGAGAAGTGGAAAT
GGCAGAAGGTCTACGTTCAGGTGGCCTTTTACCAGTTTATTTTCTTCCCAAGGATCACAA
ACTAGCAATGGGAATTCCTCATCATCAGGAGCAAATGCACCAGGGAGTGCATCTAGGGCG
AATGAGAATTGAGTACATCTTACTTGACTTTTATCATCTTCTCCCCCTTTATGTTGTTTG
CCTTGTGTACATATTTTTTTTTTTTTTTTCTTCACTTG