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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g00070.t01
CDS Infomation

cds chromosome:12X:6:173176:174251:1 gene:VIT_06s0004g00070 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5B0D6]
Sequence

ATGGATTTCCTAGGATATATCATAGTAGCTCTTCTCACAGGGTTGAAGAGTGTTGAGGGA
TTTGGAGGTGGATGGTCTAATGCCCATGCTACTTTCTATGGAGGTGGCGATGCCTCCGGA
ACAATGGGAGGGGCCTGTGGATATGGCAATCTTTACAGTCAGGGGTATGGGACAAACACA
GCTGCATTGAGCACAGCTCTTTTCAACAATGGGTTGAGCTGTGGAGCTTGCTATGAGGTT
AAATGTGTGAATGATAAGAGATGGTGTTTACCGGGATCCATCACAGTCACAGCAACTAAC
TTCTGCCCACCAAACAATGCTCTGACTAATAATGCAGGAGGCTGGTGTAATCCTCCCCTG
CAGCACTTCGATCTTTCTCAACCTGTTTTCCAGCACATTGCTCAGTACAAAGCTGGAATA
GTTCCCGTTCAGTACAGAAGAGTTGCATGCAAGAAGACCGGTGGAATCAGATTCACAGTC
AATGGTCATTCATACTTCAATCTTGTTCTCATTACAAATGTTGGTGGAGCTGGTGATGTA
GTCTCTGTATCCATCAAAGGCTCTAAAACCAGTTGGCAAGCAATGTCTCGCAACTGGGGA
CAAAACTGGCAGAGTAACACTTACCTTAACGGTCAAGCCCTCTCCTTCAAGGTCACTACC
AGCGATGGCCGCTCTGTAGTGTCGAACAATGTGGCTCCACCCAACTGGGATTTTGGACAA
ACCTTCAATGGGAGACAGTTCTGA

Peptide Sequence

PEP ID

VIT_06s0004g00070.t01
PEP Infomation

pep chromosome:12X:6:173176:174251:1 gene:VIT_06s0004g00070 transcript:VIT_06s0004g00070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5B0D6]
Sequence

MDFLGYIIVALLTGLKSVEGFGGGWSNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT
AALSTALFNNGLSCGACYEVKCVNDKRWCLPGSITVTATNFCPPNNALTNNAGGWCNPPL
QHFDLSQPVFQHIAQYKAGIVPVQYRRVACKKTGGIRFTVNGHSYFNLVLITNVGGAGDV
VSVSIKGSKTSWQAMSRNWGQNWQSNTYLNGQALSFKVTTSDGRSVVSNNVAPPNWDFGQ
TFNGRQF

Transcript Sequence

Transcript ID

VIT_06s0004g00070.t01
Transcript Infomation

cdna chromosome:12X:6:173176:174251:1 gene:VIT_06s0004g00070 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:A5B0D6]
Sequence

ATGGATTTCCTAGGATATATCATAGTAGCTCTTCTCACAGGGTTGAAGAGTGTTGAGGGA
TTTGGAGGTGGATGGTCTAATGCCCATGCTACTTTCTATGGAGGTGGCGATGCCTCCGGA
ACAATGGGAGGGGCCTGTGGATATGGCAATCTTTACAGTCAGGGGTATGGGACAAACACA
GCTGCATTGAGCACAGCTCTTTTCAACAATGGGTTGAGCTGTGGAGCTTGCTATGAGGTT
AAATGTGTGAATGATAAGAGATGGTGTTTACCGGGATCCATCACAGTCACAGCAACTAAC
TTCTGCCCACCAAACAATGCTCTGACTAATAATGCAGGAGGCTGGTGTAATCCTCCCCTG
CAGCACTTCGATCTTTCTCAACCTGTTTTCCAGCACATTGCTCAGTACAAAGCTGGAATA
GTTCCCGTTCAGTACAGAAGAGTTGCATGCAAGAAGACCGGTGGAATCAGATTCACAGTC
AATGGTCATTCATACTTCAATCTTGTTCTCATTACAAATGTTGGTGGAGCTGGTGATGTA
GTCTCTGTATCCATCAAAGGCTCTAAAACCAGTTGGCAAGCAATGTCTCGCAACTGGGGA
CAAAACTGGCAGAGTAACACTTACCTTAACGGTCAAGCCCTCTCCTTCAAGGTCACTACC
AGCGATGGCCGCTCTGTAGTGTCGAACAATGTGGCTCCACCCAACTGGGATTTTGGACAA
ACCTTCAATGGGAGACAGTTCTGA