Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0124g00530.t01
CDS Infomation

cds chromosome:12X:5:21118536:21124131:-1 gene:VIT_05s0124g00530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTACACAGCAACACCCACCACCGACTCCAAACCTCCTCAGGAGACCTTTAATCAAG
GTCTTCTTCGTTGCCATTGTATTCTGTGCCTGCTACTTTCTTGGCTCCTACAGCAATCCC
AGTTCGACACTCTCCACAATTCAGGCCCACCCACAGCACTGTTTCCCCTCAAATGCCTCA
ACTCCTAAACACCCTTCACCTTCACTGGTTCTAGACTTTGAAGCTCACCACATTCTCCCT
CTTCCCCAAGAAAGCTCACAAAGTGGGGGTTTCTTTGAATTATGCCCCAGCAATTTCACA
CATTACTGCCCATGTCAAGACCCTTCAAGAGCGAAGGAGTTCAATGTGACTAAGTTTTTC
CATAGGGAGAGGCATTGCCCTGGGAGCCACCAGGCCTTGAGGTGCTTGGTGCCTAGGCCT
AAAGGGTACAGGAGGCCATTTCCGTGGCCAAAAAGTAGAGACTACGCATGGTTCAACAAC
GTGCCTTTCCCAAAGTTGTCTGTGTACAAGAAATCCCAGAATTGGGTTCGAGTGGAAGGC
GATCGGCTTGTTTTTCCAGGCGGTGGGACTTCGTTTCCAAAGGGGGTGAAGGACTATGTG
GATGAGATTAGGCGGGTCGTGCCATTGAAGTCTGGGAACATAAGAACAGCTCTTGATGTT
GGATGTGGGGTTGCAAGCTTTGGAGCCTCTCTAATGGATTATAACATCTTGACAATGTCA
ATTGCACCAATGGATATACATGAAGCTCAAGTACAGTTCGCCTTGGAAAGAGGACTTCCA
GCCATGCTTGGTATTCTAAGCACCTACAGATTACCATACCCATCAAGATCTTTTGATATG
GCACACTGCTCCAGATGCCTTGTGCCATGGACTGCTTACGATGGAGTATATCTGATGGAA
ATTGACCGAGTTTTGCGTCCTGGTGGCTACTGGGTAGTGTCTGGGCCACCAATAAGTTGG
AAGTCTAGCTACAAGGGTTGGGAGAGAAAGGCTCAGGACTTGGAAAAGGAGCAAATCAGT
TTAGAAGATCTTGCGAGGCGGCTATGCTGGAAAAAGATTGCAGAGAGGGGACCAATTGCA
GTATGGAGAAAGCCCACTAATCATATCCACTGCATCCAAAAGTTGAAGGCTTGGAAGTCT
CCTCATTTCTGTGCTGAAACTGACCCTGATGCGGGTTGGTATAAGGAGATGGATCCATGC
ATTACTCCTCTTCCAAAAGTGACGGACATCCGCAGTATATCTGGAGGTGCACTTGAAAGA
TGGCCTAAAATGTTGAATACTGCTCCACCCAGGATTAGAAATGGGGTTACTAGAGGAGCC
ACTGTCAATACCTTTAATAAAGACAATCAAATATGGATAAAAAGAGTTTCATACTACGGA
AGTGTTCTCAAATCTCTTGGTGCAGGTAAATATAGAAATATCATGGATATGAATGCAGGC
CTAGGTGGTTTTGCAGCTGCAATTTCTAAGCAACAAGTTTGGGTTATGAATGTTGTTCCT
TTTGATGCACAAAACAACACTCTTGGGATTGTCTATGAGCGTGGCCTCATTGGAACTTAC
ATGAACTGGTGTGAGGCCTTCTCAACATATCCTCGAACATATGATTTGATACATGCTCAT
GGAGTCTTCAGCATGTACATGGGCAAATGTGACATTCTTGATATTCTCTTTGAGATGTAC
CGAATTCTTCGTCCTGAAGGGGCTGCTATAATCAGAGATCACATTGACATCATTGTGAAA
GTAAAAGGCATCACAGATCGAATGAGATGGAAAAGCAAAATTCTACACAGCGAGTATGGA
CCTTTCCATCCAGAGAAGATACTCTTTGTAGACAACTCTGAAGCCTGA

Peptide Sequence

PEP ID

VIT_05s0124g00530.t01
PEP Infomation

pep chromosome:12X:5:21118536:21124131:-1 gene:VIT_05s0124g00530 transcript:VIT_05s0124g00530.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATQQHPPPTPNLLRRPLIKVFFVAIVFCACYFLGSYSNPSSTLSTIQAHPQHCFPSNAS
TPKHPSPSLVLDFEAHHILPLPQESSQSGGFFELCPSNFTHYCPCQDPSRAKEFNVTKFF
HRERHCPGSHQALRCLVPRPKGYRRPFPWPKSRDYAWFNNVPFPKLSVYKKSQNWVRVEG
DRLVFPGGGTSFPKGVKDYVDEIRRVVPLKSGNIRTALDVGCGVASFGASLMDYNILTMS
IAPMDIHEAQVQFALERGLPAMLGILSTYRLPYPSRSFDMAHCSRCLVPWTAYDGVYLME
IDRVLRPGGYWVVSGPPISWKSSYKGWERKAQDLEKEQISLEDLARRLCWKKIAERGPIA
VWRKPTNHIHCIQKLKAWKSPHFCAETDPDAGWYKEMDPCITPLPKVTDIRSISGGALER
WPKMLNTAPPRIRNGVTRGATVNTFNKDNQIWIKRVSYYGSVLKSLGAGKYRNIMDMNAG
LGGFAAAISKQQVWVMNVVPFDAQNNTLGIVYERGLIGTYMNWCEAFSTYPRTYDLIHAH
GVFSMYMGKCDILDILFEMYRILRPEGAAIIRDHIDIIVKVKGITDRMRWKSKILHSEYG
PFHPEKILFVDNSEA

Transcript Sequence

Transcript ID

VIT_05s0124g00530.t01
Transcript Infomation

cdna chromosome:12X:5:21118536:21124131:-1 gene:VIT_05s0124g00530 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCCAGAATTCGACAGAAAAATGGCTACACAGCAACACCCACCACCGACTCCAAACCTCC
TCAGGAGACCTTTAATCAAGGTCTTCTTCGTTGCCATTGTATTCTGTGCCTGCTACTTTC
TTGGCTCCTACAGCAATCCCAGTTCGACACTCTCCACAATTCAGGCCCACCCACAGCACT
GTTTCCCCTCAAATGCCTCAACTCCTAAACACCCTTCACCTTCACTGGTTCTAGACTTTG
AAGCTCACCACATTCTCCCTCTTCCCCAAGAAAGCTCACAAAGTGGGGGTTTCTTTGAAT
TATGCCCCAGCAATTTCACACATTACTGCCCATGTCAAGACCCTTCAAGAGCGAAGGAGT
TCAATGTGACTAAGTTTTTCCATAGGGAGAGGCATTGCCCTGGGAGCCACCAGGCCTTGA
GGTGCTTGGTGCCTAGGCCTAAAGGGTACAGGAGGCCATTTCCGTGGCCAAAAAGTAGAG
ACTACGCATGGTTCAACAACGTGCCTTTCCCAAAGTTGTCTGTGTACAAGAAATCCCAGA
ATTGGGTTCGAGTGGAAGGCGATCGGCTTGTTTTTCCAGGCGGTGGGACTTCGTTTCCAA
AGGGGGTGAAGGACTATGTGGATGAGATTAGGCGGGTCGTGCCATTGAAGTCTGGGAACA
TAAGAACAGCTCTTGATGTTGGATGTGGGGTTGCAAGCTTTGGAGCCTCTCTAATGGATT
ATAACATCTTGACAATGTCAATTGCACCAATGGATATACATGAAGCTCAAGTACAGTTCG
CCTTGGAAAGAGGACTTCCAGCCATGCTTGGTATTCTAAGCACCTACAGATTACCATACC
CATCAAGATCTTTTGATATGGCACACTGCTCCAGATGCCTTGTGCCATGGACTGCTTACG
ATGGAGTATATCTGATGGAAATTGACCGAGTTTTGCGTCCTGGTGGCTACTGGGTAGTGT
CTGGGCCACCAATAAGTTGGAAGTCTAGCTACAAGGGTTGGGAGAGAAAGGCTCAGGACT
TGGAAAAGGAGCAAATCAGTTTAGAAGATCTTGCGAGGCGGCTATGCTGGAAAAAGATTG
CAGAGAGGGGACCAATTGCAGTATGGAGAAAGCCCACTAATCATATCCACTGCATCCAAA
AGTTGAAGGCTTGGAAGTCTCCTCATTTCTGTGCTGAAACTGACCCTGATGCGGGTTGGT
ATAAGGAGATGGATCCATGCATTACTCCTCTTCCAAAAGTGACGGACATCCGCAGTATAT
CTGGAGGTGCACTTGAAAGATGGCCTAAAATGTTGAATACTGCTCCACCCAGGATTAGAA
ATGGGGTTACTAGAGGAGCCACTGTCAATACCTTTAATAAAGACAATCAAATATGGATAA
AAAGAGTTTCATACTACGGAAGTGTTCTCAAATCTCTTGGTGCAGGTAAATATAGAAATA
TCATGGATATGAATGCAGGCCTAGGTGGTTTTGCAGCTGCAATTTCTAAGCAACAAGTTT
GGGTTATGAATGTTGTTCCTTTTGATGCACAAAACAACACTCTTGGGATTGTCTATGAGC
GTGGCCTCATTGGAACTTACATGAACTGGTGTGAGGCCTTCTCAACATATCCTCGAACAT
ATGATTTGATACATGCTCATGGAGTCTTCAGCATGTACATGGGCAAATGTGACATTCTTG
ATATTCTCTTTGAGATGTACCGAATTCTTCGTCCTGAAGGGGCTGCTATAATCAGAGATC
ACATTGACATCATTGTGAAAGTAAAAGGCATCACAGATCGAATGAGATGGAAAAGCAAAA
TTCTACACAGCGAGTATGGACCTTTCCATCCAGAGAAGATACTCTTTGTAGACAACTCTG
AAGCCTGAATAGGTAAATTTTGCTAGCTGCTTTGTGAAATTTTCTTGTTATTGATCCAAA
GCATTAAATACACATAAATCATGTTAATAGGATAGAGATTCTGATTGATTTTTAGTGCTC
TTTAGAGATGGAGAGACAGTTATTCAGACAGATATCTATATTCAGCAGTGAATAAATAAT
GATGCTAGTTGAGGTTTGCTATGTGAAAAGTGGAAACTGATTAACCGATTACTTATTTAT
CTTTCTGAAAGGATTTATGAACTTCTGTCCTCCACAATATGATCTCATTGGTGTGTCTAC
AAATGGGTTCAATTTTGAGTTGCAGGCTATCTTCACATTCAGTTTTGAGATATTGAGCCT
CCTATTGAACTACAATAACGCTACATTGCAACTGGTGATGTAGAATGAGCCCAAGATGAC
TTGAAGCCTGCAAAAACTGCTCACTTGAGCTCGAGGGTTACCAAAACAAGCTCATACCAA
GGCTGAACTGCAGCAATCAAAGTTTATCTTGGCAGGTTTACAGCCATAAACTCTTCATTT
CACTGAAAAGCAAGAGTATAAAAAATTCACTTGTTTTGCTTTTCCTATCGAGTCATAAAT
GTAACTTTGTGTATCTGTGGAGGATGAAAAGAGTAAACAAGGAAATACACAGGAAGTAGA
AGAAGATA