Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0124g00230.t01
CDS Infomation

cds chromosome:12X:5:20720443:20721540:-1 gene:VIT_05s0124g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGATTCTGCCTGATGAAATTATTGAGAACATACTGCTGAGATTACCGGTGAAGTCT
CTGCTACGATTCAGGTGCGTTTGCAAAGCATGGCGGGCATTAATCTCCGATTCCGAGTTC
GCGGAAATGCACTACCAGCAACCACAAACACAAGCCAGAAGCCGAGTCCTTATCTCATGT
CCAGGCCGTGTGATTCGATCCATGGACCCTGATGCATCTGGTAATGATAATAGTGGGGTA
GTGAATATCGATTATCCATTGGAACCCTCTAATTTAGTTTTTCAAATTCTGGATTCTTGT
GATGGCTTACTATGTGTTATTGATTCCTTTCATAACCCTGCTTTGTGGAACCCATCTACC
AGACAATTCAATCCCTTGCCGAAGCCTAGTTTTCTTGAAAATAGTGACATTTTATATGGA
TTTACGTATGACTACTCAAGTGATGACTACAAGATTGTAAGGGTGGTTTCTACGTCCCGC
GATGTCATCAAAACTGAAATTGATGTTTTTGAGCTAAAAACCAATGAATGGAGAAGGGTT
GAGGAAACCCATTATAGTAGGCCTGCCTGGGACGTGGGAACTTTTCTTAACGGGGCATTC
TATTGGCTAGCATGGCGCCTTAGTGAAGGACATGAAGGTTTTAGCCGCGTAGTTGTTTCT
TTTGATCTCAAAGAGGAGAGATTCAAGGAGGTTGAGTTGCCAAGTGATGTTGGAATTATT
AATTTGAGGGTCTTTGGAGGGTACCTTTCTGCGATGTACCATGATTTGTATGGAGAGCTT
ACTAAGATGTGGGTAATGGAGGAGAAAGCCGGGAAAGACTCTTGGGCAAATGTGGCGACT
TTACCTTTTAGGAGTGAAAATGATTCAGATGGACCTCTGCTGTGCTGGTTTGCAAACTTT
TTGAAGAATGGCGGAGAGTTTCTACTGGTGATTAATAAGTGGAAATTAATCCTGTATGAT
TTTAAAACAAAAACACACAAGGATATTATGTTTTCCGGTGATTTGGGTTTGTCCATTCCG
GTTTTATACACAGAGACTCTAGTTTCACCTTACTGCATCAATGAGACCAATGAGGATGTC
TGA

Peptide Sequence

PEP ID

VIT_05s0124g00230.t01
PEP Infomation

pep chromosome:12X:5:20720443:20721540:-1 gene:VIT_05s0124g00230 transcript:VIT_05s0124g00230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAILPDEIIENILLRLPVKSLLRFRCVCKAWRALISDSEFAEMHYQQPQTQARSRVLISC
PGRVIRSMDPDASGNDNSGVVNIDYPLEPSNLVFQILDSCDGLLCVIDSFHNPALWNPST
RQFNPLPKPSFLENSDILYGFTYDYSSDDYKIVRVVSTSRDVIKTEIDVFELKTNEWRRV
EETHYSRPAWDVGTFLNGAFYWLAWRLSEGHEGFSRVVVSFDLKEERFKEVELPSDVGII
NLRVFGGYLSAMYHDLYGELTKMWVMEEKAGKDSWANVATLPFRSENDSDGPLLCWFANF
LKNGGEFLLVINKWKLILYDFKTKTHKDIMFSGDLGLSIPVLYTETLVSPYCINETNEDV

Transcript Sequence

Transcript ID

VIT_05s0124g00230.t01
Transcript Infomation

cdna chromosome:12X:5:20720443:20721540:-1 gene:VIT_05s0124g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAAGAGAGAGATCAATGGCGATTCTGCCTGATGAAATTATTGAGAACATACTGCTGAGA
TTACCGGTGAAGTCTCTGCTACGATTCAGGTGCGTTTGCAAAGCATGGCGGGCATTAATC
TCCGATTCCGAGTTCGCGGAAATGCACTACCAGCAACCACAAACACAAGCCAGAAGCCGA
GTCCTTATCTCATGTCCAGGCCGTGTGATTCGATCCATGGACCCTGATGCATCTGGTAAT
GATAATAGTGGGGTAGTGAATATCGATTATCCATTGGAACCCTCTAATTTAGTTTTTCAA
ATTCTGGATTCTTGTGATGGCTTACTATGTGTTATTGATTCCTTTCATAACCCTGCTTTG
TGGAACCCATCTACCAGACAATTCAATCCCTTGCCGAAGCCTAGTTTTCTTGAAAATAGT
GACATTTTATATGGATTTACGTATGACTACTCAAGTGATGACTACAAGATTGTAAGGGTG
GTTTCTACGTCCCGCGATGTCATCAAAACTGAAATTGATGTTTTTGAGCTAAAAACCAAT
GAATGGAGAAGGGTTGAGGAAACCCATTATAGTAGGCCTGCCTGGGACGTGGGAACTTTT
CTTAACGGGGCATTCTATTGGCTAGCATGGCGCCTTAGTGAAGGACATGAAGGTTTTAGC
CGCGTAGTTGTTTCTTTTGATCTCAAAGAGGAGAGATTCAAGGAGGTTGAGTTGCCAAGT
GATGTTGGAATTATTAATTTGAGGGTCTTTGGAGGGTACCTTTCTGCGATGTACCATGAT
TTGTATGGAGAGCTTACTAAGATGTGGGTAATGGAGGAGAAAGCCGGGAAAGACTCTTGG
GCAAATGTGGCGACTTTACCTTTTAGGAGTGAAAATGATTCAGATGGACCTCTGCTGTGC
TGGTTTGCAAACTTTTTGAAGAATGGCGGAGAGTTTCTACTGGTGATTAATAAGTGGAAA
TTAATCCTGTATGATTTTAAAACAAAAACACACAAGGATATTATGTTTTCCGGTGATTTG
GGTTTGTCCATTCCGGTTTTATACACAGAGACTCTAGTTTCACCTTACTGCATCAATGAG
ACCAATGAGGATGTCTGA