Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0102g00720.t01
CDS Infomation

cds chromosome:12X:5:22621138:22635501:-1 gene:VIT_05s0102g00720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGACTGCAAAATTGGAGGGAGTCCTGCAGGTGTTGTCTACCTCTCTTTCCCGAACC
AAATGGCGACTCAAAGCTTCGTCAAAGCGTCGTCTCGAAATAGATATACTAGCCTTGTGC
ACTGGAATGAGGCCAGTTGTAATGGTGGATTATGGAGGAAAGATGCCTGAACTACAAGAA
CGACTTTGTGCAGTTCTTAAACTCAGTCAAAAGGCCTCATCCATTTTTTATCATCTGAGA
ATAATGGTCATAGAAGATATGATATATTTGATACATGTCAAAGAACTGGCTGAGCATGTG
AGGTCAAGCTTAAACTCAGAACCAGAACTGCACTTTGTGGACCTTGAACACAATCCTCCA
AAGATGATAGTACAAGCAGAAAAAAGTTCAGTCGCAATGCAGCTTATATCAGTTCAGAAA
TGGTTTTCTTTGTTATTTCCTGTTGACGAAATCAACAATGACCTCTTGCCTTCTATCACG
ACAGAGGTCATGTCTATTGCCAAACCTTCCATTAGTGAGCCCGTCGCTTCTCAATCTTCA
GAGATCATTGATCTTAGTAGTGGCATTCAAGGCACTCAAGTCGCTGTGCCAACTCTAAAT
GGATGGCTTCTTGGATATCCAGTGGTGTACTTGTTCAGCACAGAGCATATTTCAGATGCT
ATTTTTAATCTTTCAACCAAGTCCCTTCGCATATTCAAAATTTTAATCTGCAGGAATGAT
GCCTACAAAGGATCTGGGAAAGAAGAATTACTGAGTTTCTCAGTGCCTTATGACCTGAGC
ATGGGAGGGAGCAATGAACCATGGGCTAAGGCATTTATGGCTCACTTGGAAGCAAAGTGG
GAAAAATGCAAGCAAGTTTGGAGTTCTCTGCAGATGGAGGAAAGCGACTTAGCCACCTAC
TCCAGATGGCTGCCAGGAGGGCACGACCGAGACTATAAAGGTGACAGTGCCCTGGCAGCA
TTGTCAACCCGATTATCATACTTCAACTGA

Peptide Sequence

PEP ID

VIT_05s0102g00720.t01
PEP Infomation

pep chromosome:12X:5:22621138:22635501:-1 gene:VIT_05s0102g00720 transcript:VIT_05s0102g00720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

METAKLEGVLQVLSTSLSRTKWRLKASSKRRLEIDILALCTGMRPVVMVDYGGKMPELQE
RLCAVLKLSQKASSIFYHLRIMVIEDMIYLIHVKELAEHVRSSLNSEPELHFVDLEHNPP
KMIVQAEKSSVAMQLISVQKWFSLLFPVDEINNDLLPSITTEVMSIAKPSISEPVASQSS
EIIDLSSGIQGTQVAVPTLNGWLLGYPVVYLFSTEHISDAIFNLSTKSLRIFKILICRND
AYKGSGKEELLSFSVPYDLSMGGSNEPWAKAFMAHLEAKWEKCKQVWSSLQMEESDLATY
SRWLPGGHDRDYKGDSALAALSTRLSYFN

Transcript Sequence

Transcript ID

VIT_05s0102g00720.t01
Transcript Infomation

cdna chromosome:12X:5:22621138:22635501:-1 gene:VIT_05s0102g00720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTGAAGACCATTGCAATTTCTTCTGTGTTTTGTTGTCTGAATCGAATTGGAATGGAGAC
TGCAAAATTGGAGGGAGTCCTGCAGGTGTTGTCTACCTCTCTTTCCCGAACCAAATGGCG
ACTCAAAGCTTCGTCAAAGCGTCGTCTCGAAATAGATATACTAGCCTTGTGCACTGGAAT
GAGGCCAGTTGTAATGGTGGATTATGGAGGAAAGATGCCTGAACTACAAGAACGACTTTG
TGCAGTTCTTAAACTCAGTCAAAAGGCCTCATCCATTTTTTATCATCTGAGAATAATGGT
CATAGAAGATATGATATATTTGATACATGTCAAAGAACTGGCTGAGCATGTGAGGTCAAG
CTTAAACTCAGAACCAGAACTGCACTTTGTGGACCTTGAACACAATCCTCCAAAGATGAT
AGTACAAGCAGAAAAAAGTTCAGTCGCAATGCAGCTTATATCAGTTCAGAAATGGTTTTC
TTTGTTATTTCCTGTTGACGAAATCAACAATGACCTCTTGCCTTCTATCACGACAGAGGT
CATGTCTATTGCCAAACCTTCCATTAGTGAGCCCGTCGCTTCTCAATCTTCAGAGATCAT
TGATCTTAGTAGTGGCATTCAAGGCACTCAAGTCGCTGTGCCAACTCTAAATGGATGGCT
TCTTGGATATCCAGTGGTGTACTTGTTCAGCACAGAGCATATTTCAGATGCTATTTTTAA
TCTTTCAACCAAGTCCCTTCGCATATTCAAAATTTTAATCTGCAGGAATGATGCCTACAA
AGGATCTGGGAAAGAAGAATTACTGAGTTTCTCAGTGCCTTATGACCTGAGCATGGGAGG
GAGCAATGAACCATGGGCTAAGGCATTTATGGCTCACTTGGAAGCAAAGTGGGAAAAATG
CAAGCAAGTTTGGAGTTCTCTGCAGATGGAGGAAAGCGACTTAGCCACCTACTCCAGATG
GCTGCCAGGAGGGCACGACCGAGACTATAAAGGTGACAGTGCCCTGGCAGCATTGTCAAC
CCGATTATCATACTTCAACTGA