Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0102g00440.t01
CDS Infomation

cds chromosome:12X:5:22394221:22398999:1 gene:VIT_05s0102g00440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGGCACCTCAGGTAGACCTGATTTTGTAGAGAGTGATGGGGGTTCAGATGATGAA
ACCTTTGAAAACTTTGGGGAACATGAAGGCTCAGAAGATGGACTGTTGAGTTGTGATTCA
CCTGTTCTAAATGAAGAGTTGATTTTGAGGGAACCGACAATGGAAGGTTTGAGTATGCAA
AACTTGGAACCATTTAGTGGGATGACTTTTCCATCATTAGATGATGCGAGGAATTTCTAT
TATGAGTATGCCAAGCGTGTGGGATTCACCATAAGGACAAACCGAATCCGTCACTCACTA
AAGAACATGGCGGTAATTGGCAGAGACTTTGTTTGTTCTAGAGAAGGTTTTCGTGCAGCA
AAGCACACATCTAGAAAAGATAGGGTACTTCCTCCACGGCCAATTACAAGAGAAGGGTGC
AAGGCAATGATAAGGCTGGCAGCAAGGGATGGGAACAAATGGGTGGTCACAAAATTCGTA
AGAGAGCACAACCACAAACTAATGACTCATTGTAAATTTTCTGGGGAGCTACCAATTATA
AATATTCTCAGTGAGGAAGAGAAGGATAAGAAAATCCAGGATTTATACAATGAATTGCAG
CTTGAAAGAGAACGATCTGCAGGATTTCAACAACAGCTAGGCATGATTCTCAAAGATCTT
GAGGAACATGCTGACTTCATGTCTGTAAGAGTTGAAGACGTGGTTAACAAAATGAGGGAA
ATCGAACTTGATGATCAATAA

Peptide Sequence

PEP ID

VIT_05s0102g00440.t01
PEP Infomation

pep chromosome:12X:5:22394221:22398999:1 gene:VIT_05s0102g00440 transcript:VIT_05s0102g00440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEGTSGRPDFVESDGGSDDETFENFGEHEGSEDGLLSCDSPVLNEELILREPTMEGLSMQ
NLEPFSGMTFPSLDDARNFYYEYAKRVGFTIRTNRIRHSLKNMAVIGRDFVCSREGFRAA
KHTSRKDRVLPPRPITREGCKAMIRLAARDGNKWVVTKFVREHNHKLMTHCKFSGELPII
NILSEEEKDKKIQDLYNELQLERERSAGFQQQLGMILKDLEEHADFMSVRVEDVVNKMRE
IELDDQ

Transcript Sequence

Transcript ID

VIT_05s0102g00440.t01
Transcript Infomation

cdna chromosome:12X:5:22394221:22398999:1 gene:VIT_05s0102g00440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAACATAATGGAAGGCACCTCAGGTAGACCTGATTTTGTAGAGAGTGATGGGGGTTCAG
ATGATGAAACCTTTGAAAACTTTGGGGAACATGAAGGCTCAGAAGATGGACTGTTGAGTT
GTGATTCACCTGTTCTAAATGAAGAGTTGATTTTGAGGGAACCGACAATGGAAGGTTTGA
GTATGCAAAACTTGGAACCATTTAGTGGGATGACTTTTCCATCATTAGATGATGCGAGGA
ATTTCTATTATGAGTATGCCAAGCGTGTGGGATTCACCATAAGGACAAACCGAATCCGTC
ACTCACTAAAGAACATGGCGGTAATTGGCAGAGACTTTGTTTGTTCTAGAGAAGGTTTTC
GTGCAGCAAAGCACACATCTAGAAAAGATAGGGTACTTCCTCCACGGCCAATTACAAGAG
AAGGGTGCAAGGCAATGATAAGGCTGGCAGCAAGGGATGGGAACAAATGGGTGGTCACAA
AATTCGTAAGAGAGCACAACCACAAACTAATGACTCATTGTAAATTTTCTGGGGAGCTAC
CAATTATAAATATTCTCAGTGAGGAAGAGAAGGATAAGAAAATCCAGGATTTATACAATG
AATTGCAGCTTGAAAGAGAACGATCTGCAGGATTTCAACAACAGCTAGGCATGATTCTCA
AAGATCTTGAGGAACATGCTGACTTCATGTCTGTAAGAGTTGAAGACGTGGTTAACAAAA
TGAGGGAAATCGAACTTGATGATCAATAAGCCACAGATAGAGGTGCTGTTTCTCATGACC
CGTTATTTGTCCCTTTTATCAAATTACAGCATCAACTTCTCCACAGTGGCTAGCTGTCTT
TGGAATCTGAACATCTTCCATCTCCTACCACATTGCTCATTGGTAACAGACATCCTTAGT
TTGGTTGAAACCCAGCTCCATTCAAGTACAGTTTTCCTCAAACTCAAATCATTTAATGAG
TTTCTGCATTTTGAAATTTTGTTGGTGATTGAGTTTTGTGTTACCTTCTTCTCCCCCATT
ACCAAGCCTCAAAGTTCTCCTTCACATTAGGACTGTATTTCCATTTCCTTGTTCTGTTGT
ACTCAAACTGTTTCAGTCCGGGTATTAGGTAATTATTACCCATGAAGAGGAAGACGATGA
TGCCACAACGACAATGATGATGAGTTTGTAATAGCAGCAATGCCCATGTGTTTGAGTGTG
TCATGGAAGAAAATTAGGTTTTAAACAGTTCCCTTTCTGCTTCTAGTCCTCTGCCTTAAA
CATGTAGTTGCCTTTGATGATCAGCAGGTGTATGACTTCTCCCTTGAGGATGTTTTGGTG
GAAGAGCTGCCCAAAAAACTCTGACGGAGTGTTCAGATGGTCTCAACAGATACTTGCATA
AAGATTTCCAGGAATCAACAGTGAGATTTGGCCCAAAAATTTTCAGATATTAAATTTTCT
TTATAAGTCTTTTTTTTTTTTTTTTTGCTCTCGCTTAGGTGTTTGGAATATTGGAATAGG
AAATAAGAATGAAAAATTCATTCCATGTTTTGTGCATCCTATTCTTCCTATTCTAATTTC
TAATAATTAATCCATACATAATAAAGAATGAATTTCCATT