Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0102g00160.t01
CDS Infomation

cds chromosome:12X:5:22025284:22037728:1 gene:VIT_05s0102g00160 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A5C6J4]
Sequence

ATGGACTCCGAGGACGATATGCACGATGCTAACGATGTCGACTCTTTGGAGGACTTCTAC
AGCGGCGACACCGCGGCCGACTCCGACGACGACAACGACGCCGATTACGACTTCGACAAC
GATTCCGATGACGACGCCGACGCCATCATGTTGCATCGCCATCAGCCTAATTATACCATC
TTAAAGGAAGAAGATATACATCAGCATCAGGAAGATGATATTGCAAGAGTAGCTGCTGTT
CTTTCAATAGCAAGTGTTTCAGCGAGCATCCTGCTCCGCCACTACCATTGGAGTGTTAGT
AAAGTCAATGATGAATGGTTTGCTGATGAAAGTAGAGTCCGGAAAGCTGTTGGCTTATTG
GAAGAACCACTTGTTCGATATCCCAATGCTAAAGAACTGACTTGTGGGATCTGTTTTGAA
ACCTATCCTCGTGATATGATACAATCAGCTGCTTGTGGTCATCCATTTTGTAGCACATGC
TGGGAAGGTTATATTAGCACATCAATCAATGATGGTCCTGGTTGTTTGATGTTAAGATGC
CCTGATCCATCTTGCCGAGCTGCTGTGGGCCAAGACATGATCAATCTCTTGGCATCTGAT
GAAGACAACGAGAAGTATTCTCGTTACCTTCTTAGATCATATATCGAAGACAATAGGAAG
ACCAAATGGTGTCCTGCCCCAGGTTGTGAGTATGCTGTGGAGTTCGTTGCTGGTAGTGGG
AGCTATGATGTAGCCTGCCAGTGCTCATACGGATTTTGTTGGAATTGTACAGAGGAAGCT
CATCGTCCAGTGGACTGTAGCACTGTGGCCAAGTGGATTTTGAAGAACAGCGCTGAATCT
GAAAACATGAATTGGATACTAGCTAATTCGAAGCCTTGTCCGAAGTGTAAGCGTCCAATT
GAAAAAAACCAAGGGTGTATGCATATTACATGCACACCACCCTGCAAATTTGAATTTTGC
TGGCTATGCCTTGGTGCATGGTCAGATCATGGTGAGAGGACGGGTGGCTTTTACGCATGT
AATCGATATGAAGCAGCAAAGCAAGAGGGAGTGTATGATGAAACTGAGAGAAGACGGGAG
ATGGCGAAAAATTCTTTAGAACGATACACTCATTATTATGAACGGTGGGCGACCAACCAA
TCGTCAAGGCAAAAAGCTCTTGCAGATTTACATCAAATGCAAAACGTGAATATTGAGAAG
CTCAGTGACAAACAGTGCCAACCTGAATCACAGCTCAAGTTCATAACAGAGGCCTGGCTA
CAGATAGTTGAATGCAGACGGGTGCTGAAATGGACATATGCATATGGTTACTACTTACCC
GAGCATGAGCTTCCCAGGAGACAATTTTTTGAGTACTTGCAAGGTGAGGCGGAGTCGGGT
TTGGAAAGGCTTCATCAATGTGCAGAGAAGGAATTACAAACATACCTCAATGTTGATGGT
CCATCAGCAGATTTCAATGACTTCCGCACAAAGCTAGCTGGACTGACAAGTGTAACACGG
AATTACTTCGAGAACCTGGTCAGAGCATTGGAGAATGGGCTGTCAGATGTAGACTCTTAT
GGGGCTTGTAGCAGGACGACAAGTTCAAAGAGCATGGGAGGCACCAGTAAGGCTAGAGGT
GGAAGGGGAAAGGGAACTACATCCCGATCCAGTAGCTCCAACAAAACCCCAGACGATTCA
AGTCGATGGTATTGTGAACACTGTGCTACTGCTAATGCCAAGTCTGCCTACACATGCCAG
ATGTGCCACCAGCGACGGGCCTAA

Peptide Sequence

PEP ID

VIT_05s0102g00160.t01
PEP Infomation

pep chromosome:12X:5:22025284:22037728:1 gene:VIT_05s0102g00160 transcript:VIT_05s0102g00160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A5C6J4]
Sequence

MDSEDDMHDANDVDSLEDFYSGDTAADSDDDNDADYDFDNDSDDDADAIMLHRHQPNYTI
LKEEDIHQHQEDDIARVAAVLSIASVSASILLRHYHWSVSKVNDEWFADESRVRKAVGLL
EEPLVRYPNAKELTCGICFETYPRDMIQSAACGHPFCSTCWEGYISTSINDGPGCLMLRC
PDPSCRAAVGQDMINLLASDEDNEKYSRYLLRSYIEDNRKTKWCPAPGCEYAVEFVAGSG
SYDVACQCSYGFCWNCTEEAHRPVDCSTVAKWILKNSAESENMNWILANSKPCPKCKRPI
EKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETERRRE
MAKNSLERYTHYYERWATNQSSRQKALADLHQMQNVNIEKLSDKQCQPESQLKFITEAWL
QIVECRRVLKWTYAYGYYLPEHELPRRQFFEYLQGEAESGLERLHQCAEKELQTYLNVDG
PSADFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVDSYGACSRTTSSKSMGGTSKARG
GRGKGTTSRSSSSNKTPDDSSRWYCEHCATANAKSAYTCQMCHQRRA

Transcript Sequence

Transcript ID

VIT_05s0102g00160.t01
Transcript Infomation

cdna chromosome:12X:5:22025284:22037728:1 gene:VIT_05s0102g00160 gene_biotype:protein_coding transcript_biotype:protein_coding description:RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A5C6J4]
Sequence

GTCTGGAAGGATGGACTCCGAGGACGATATGCACGATGCTAACGATGTCGACTCTTTGGA
GGACTTCTACAGCGGCGACACCGCGGCCGACTCCGACGACGACAACGACGCCGATTACGA
CTTCGACAACGATTCCGATGACGACGCCGACGCCATCATGTTGCATCGCCATCAGCCTAA
TTATACCATCTTAAAGGAAGAAGATATACATCAGCATCAGGAAGATGATATTGCAAGAGT
AGCTGCTGTTCTTTCAATAGCAAGTGTTTCAGCGAGCATCCTGCTCCGCCACTACCATTG
GAGTGTTAGTAAAGTCAATGATGAATGGTTTGCTGATGAAAGTAGAGTCCGGAAAGCTGT
TGGCTTATTGGAAGAACCACTTGTTCGATATCCCAATGCTAAAGAACTGACTTGTGGGAT
CTGTTTTGAAACCTATCCTCGTGATATGATACAATCAGCTGCTTGTGGTCATCCATTTTG
TAGCACATGCTGGGAAGGTTATATTAGCACATCAATCAATGATGGTCCTGGTTGTTTGAT
GTTAAGATGCCCTGATCCATCTTGCCGAGCTGCTGTGGGCCAAGACATGATCAATCTCTT
GGCATCTGATGAAGACAACGAGAAGTATTCTCGTTACCTTCTTAGATCATATATCGAAGA
CAATAGGAAGACCAAATGGTGTCCTGCCCCAGGTTGTGAGTATGCTGTGGAGTTCGTTGC
TGGTAGTGGGAGCTATGATGTAGCCTGCCAGTGCTCATACGGATTTTGTTGGAATTGTAC
AGAGGAAGCTCATCGTCCAGTGGACTGTAGCACTGTGGCCAAGTGGATTTTGAAGAACAG
CGCTGAATCTGAAAACATGAATTGGATACTAGCTAATTCGAAGCCTTGTCCGAAGTGTAA
GCGTCCAATTGAAAAAAACCAAGGGTGTATGCATATTACATGCACACCACCCTGCAAATT
TGAATTTTGCTGGCTATGCCTTGGTGCATGGTCAGATCATGGTGAGAGGACGGGTGGCTT
TTACGCATGTAATCGATATGAAGCAGCAAAGCAAGAGGGAGTGTATGATGAAACTGAGAG
AAGACGGGAGATGGCGAAAAATTCTTTAGAACGATACACTCATTATTATGAACGGTGGGC
GACCAACCAATCGTCAAGGCAAAAAGCTCTTGCAGATTTACATCAAATGCAAAACGTGAA
TATTGAGAAGCTCAGTGACAAACAGTGCCAACCTGAATCACAGCTCAAGTTCATAACAGA
GGCCTGGCTACAGATAGTTGAATGCAGACGGGTGCTGAAATGGACATATGCATATGGTTA
CTACTTACCCGAGCATGAGCTTCCCAGGAGACAATTTTTTGAGTACTTGCAAGGTGAGGC
GGAGTCGGGTTTGGAAAGGCTTCATCAATGTGCAGAGAAGGAATTACAAACATACCTCAA
TGTTGATGGTCCATCAGCAGATTTCAATGACTTCCGCACAAAGCTAGCTGGACTGACAAG
TGTAACACGGAATTACTTCGAGAACCTGGTCAGAGCATTGGAGAATGGGCTGTCAGATGT
AGACTCTTATGGGGCTTGTAGCAGGACGACAAGTTCAAAGAGCATGGGAGGCACCAGTAA
GGCTAGAGGTGGAAGGGGAAAGGGAACTACATCCCGATCCAGTAGCTCCAACAAAACCCC
AGACGATTCAAGTCGATGGTATTGTGAACACTGTGCTACTGCTAATGCCAAGTCTGCCTA
CACATGCCAGATGTGCCACCAGCGACGGGCCTAATCCTCCTTGCACCTGCTTAGAGTACC
CTTTCAAAGCGCGCTCAAGAAAAATGAAGGGGATTTTCACTAGACATTAAGGACATAAAC
AAATTCGGTGGTTCATCCTCGTTCTGAGGCGGACAAACAGTGAAAGTGAAGTAGGAATGG
AAGAAAAGAAGTCGAGGAAACGGAGTGAGTTTACCGTCTTTTGTGTGTTCAACAGTGGCA
TTTGAACATGATTTTCATGTACATAGTTTCTATATATCTATCTATTTATCCTTCTGTGAA
TCTACTTGTTGAGGTTCTAAAACTTGCTTCTGCTCCATCATGTTGTATTACGGACATAGC
CAGAGGCAAAAAGTGCAAATATACTCATTTGTGTCTTTTTGATTTCTCTTTTAAAAAATT
GATTTTGTGCTGCTTCCCTCAATGCTGTGTAAAGAACCATCCCCACCCTCTTCTCGAACC
CCTACCATCAAAATCATA