Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0102g00080.t01
CDS Infomation

cds chromosome:12X:5:21896852:21908866:-1 gene:VIT_05s0102g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCGGGAGCAGAGCGAACGCGGTGTTCTACGCCGAGTCCTACCATCCGATCCAGGCC
GGAAGCATCGACGGCACAGATACTCTCCCCCACGACAATGCCGTCTACAGAGCTCTCCTC
TGCTCCTCTGCCGGCCTCTATGACCCATTTGGTGATCCGAAGGTAATTGGAGACCCTTAC
TGCACTGTGTTCGTTGGTCACCTCAACCACCTCACTACTGAAGACACTCTTCATAAGGCT
ATGAGCAAATTTGGTAGAGTTAAAAGCTTGCGATTGGTCAGGCACATTGTAACTGGGGCA
TCACAGGGCTACGCTTTTGTTGAATACGAAACAGAAAGAGAGATGCGGCGGGCATACGAG
GATGCTCACCATTCCATGATTGATGATTGTGAAATTATTGTTGATTATAACAGGCAGCAG
TTGATGCCAGGGTGGATTCCAAGAAGGTTAGGAGGTGGCATTGGTGGTAAAAAGGAGTCA
GGACAGCTTCGTTTTGGAGGACGAGAGAGACCATTTCGAGCTCCCCTGCGACCGATCCCA
TTGGATGATCTGAAGAGGCTCGGCATTCCACCTCCACCAGAAGGAAGGTACATGTCACGC
TTTCAGGTGCCACCACCTCCCAGAAGAAAAAGGAGCAATATGGACAGGGAAGAACCTTCG
CACAGGGGAAGCTCTATTGACAGGGAAGATCGATATCACAAAGGTGGCTCTATAGAGGGG
GAAGAACATTCTCATGAGGGGAGCTCTGTGGATAGGGAAGAACACTCCCACAGAAGGAGC
TCTATAGACAAAAGAAGTTCCATTGACAGGGAAGAAAGGTTTCACAAAAGAAGCTCTAGC
GACAGGGAAGTGCGCTCTCACAAAAGAAGCTCCACTGACTTGGTAGAACGCTCAGACAAA
AGAAGCTTCATCCACGGGGAAGAACGCTTTCACAGTAGGAGCTCCATGGATTGGGAAGAG
CACTCTCACAAAAGCTCTATGGACAGGGAAAGACACAGTCACAAGCGCCATAGACAGTAC
TGA

Peptide Sequence

PEP ID

VIT_05s0102g00080.t01
PEP Infomation

pep chromosome:12X:5:21896852:21908866:-1 gene:VIT_05s0102g00080 transcript:VIT_05s0102g00080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSGSRANAVFYAESYHPIQAGSIDGTDTLPHDNAVYRALLCSSAGLYDPFGDPKVIGDPY
CTVFVGHLNHLTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFVEYETEREMRRAYE
DAHHSMIDDCEIIVDYNRQQLMPGWIPRRLGGGIGGKKESGQLRFGGRERPFRAPLRPIP
LDDLKRLGIPPPPEGRYMSRFQVPPPPRRKRSNMDREEPSHRGSSIDREDRYHKGGSIEG
EEHSHEGSSVDREEHSHRRSSIDKRSSIDREERFHKRSSSDREVRSHKRSSTDLVERSDK
RSFIHGEERFHSRSSMDWEEHSHKSSMDRERHSHKRHRQY

Transcript Sequence

Transcript ID

VIT_05s0102g00080.t01
Transcript Infomation

cdna chromosome:12X:5:21896852:21908866:-1 gene:VIT_05s0102g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGGGCAGAGAGGAAAGAAGGGAGAGACCGAGAGAGAGAGAGAGGAGCGGTCGAGTATGA
GCGGGAGCAGAGCGAACGCGGTGTTCTACGCCGAGTCCTACCATCCGATCCAGGCCGGAA
GCATCGACGGCACAGATACTCTCCCCCACGACAATGCCGTCTACAGAGCTCTCCTCTGCT
CCTCTGCCGGCCTCTATGACCCATTTGGTGATCCGAAGGTAATTGGAGACCCTTACTGCA
CTGTGTTCGTTGGTCACCTCAACCACCTCACTACTGAAGACACTCTTCATAAGGCTATGA
GCAAATTTGGTAGAGTTAAAAGCTTGCGATTGGTCAGGCACATTGTAACTGGGGCATCAC
AGGGCTACGCTTTTGTTGAATACGAAACAGAAAGAGAGATGCGGCGGGCATACGAGGATG
CTCACCATTCCATGATTGATGATTGTGAAATTATTGTTGATTATAACAGGCAGCAGTTGA
TGCCAGGGTGGATTCCAAGAAGGTTAGGAGGTGGCATTGGTGGTAAAAAGGAGTCAGGAC
AGCTTCGTTTTGGAGGACGAGAGAGACCATTTCGAGCTCCCCTGCGACCGATCCCATTGG
ATGATCTGAAGAGGCTCGGCATTCCACCTCCACCAGAAGGAAGGTACATGTCACGCTTTC
AGGTGCCACCACCTCCCAGAAGAAAAAGGAGCAATATGGACAGGGAAGAACCTTCGCACA
GGGGAAGCTCTATTGACAGGGAAGATCGATATCACAAAGGTGGCTCTATAGAGGGGGAAG
AACATTCTCATGAGGGGAGCTCTGTGGATAGGGAAGAACACTCCCACAGAAGGAGCTCTA
TAGACAAAAGAAGTTCCATTGACAGGGAAGAAAGGTTTCACAAAAGAAGCTCTAGCGACA
GGGAAGTGCGCTCTCACAAAAGAAGCTCCACTGACTTGGTAGAACGCTCAGACAAAAGAA
GCTTCATCCACGGGGAAGAACGCTTTCACAGTAGGAGCTCCATGGATTGGGAAGAGCACT
CTCACAAAAGCTCTATGGACAGGGAAAGACACAGTCACAAGCGCCATAGACAGTACTGAT
TCCCATGATCACTCATCACCGATTTCTAGTAGCATTAGCCCTCATCTATGATTCTATAAT
ACAACATAATTGGGCAACTTGAGTTAGATACATGTGCCTTCCAAATCAATCTTAATCCTG
GTTCCCTGAGCTATGCTACTTAATTCAAAGTGTGATGATCCCCACTCCTCAAAACCAGCT
TTCATGTTCTTTAATTTCTAATTTTATATAATGATAAAGCTGAGATGGTGGAATGATTCG
GATATAGTTGTTGCAACTGACTTTCATGGGAATGTGCTGTTAATTGACAGAAATACTTCC
TGAGGATAGCCTCAAAAGTTTGACAAAGTCTGATTCAATTACAGTATCACCATCAACATT
TGAATTAGAAAACCTTACATTTGATCCTAGCACAGAATGTTATCAATTTAAAATGGTTAT
ACAGAACCCACTTCTTCCCCAGACGATGTAGTCATTAATTGCATGAGACTTTACAATAAA
CCGGGTGGGCTAGTGGTGCCTCTCCTGCAGAAGGAAGAACTTGTTGCACCACTTTATTCT
TGGATCCTTAATGCCCTGGTGACATACGCCGGCTACTGGGCAAACTGGGGAGGGTGCCTG
CAAGGAGCTAAACACTCATATACAAAACCCTTTGAATTGTCTTTCCTGATGCAGTCATTG
ATTCTGAAAAACCTCTCCAATGTAGTTAGCACAGCTCAGTGATCCGTCTCTCTGTACACA
TACTTCCATGTA