Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0094g01420.t01
CDS Infomation

cds chromosome:12X:5:24721436:24725718:-1 gene:VIT_05s0094g01420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGAACCCAAGAAGATTATCATTGACTCAGACCCTGGGATCGATGATGCCATGGCC
ATATTTGTGGCTCTGCAGTCACCCGAAGTGGACGTCATCGGACTCACTACCATCTACGGC
AACGTCTACACCACTCTGGCCACTAGAAATGCTTTACATTTGTTGGAGATCGCGGGGAGG
ACAGATATCCCAGTGGCTGAAGGATCTCATGTGACAATAACTAAAGGTACAAAACTCCGT
ATTGCTGATTTTGTCCATGGTGCGGATGGACTTGGAAACCAAAACTTCCCTCCATCAGCA
GGAAAGCCAATTGAACAGTCAGCAGCTGCTTTTCTTATTGAGCAAGCTAAACTTTATCCT
GGAAAAGTCACAGTGGTGGCACTGGGTCCACTTACAAATATTGCACTGGCTATTGAACTA
GATCCTGGGTTTTCCAAAAACATTGGGCAGATTGTTCTTCTTGGTGGTGCTTTTGCTGTA
AATGGGAATGTGAATCCAGCAGCTGAGGCCAATATATTTGGCGATCCAGAAGCTGCAGAT
ATTGTATTCACAAGTGGAGCAGACATTCTGGCTGTGGGGATAAATGTTACCCATCAAGTT
GTATTGACAGATGCCGATCGTGAAAAGCTGGCACAGTCCAATGGGAAATTTGCCCAGTAC
CTGTGCAAGATCTTAGAGGTCTATTTCTCTTATCATCGCGATGCATACAACACCAAAGGT
GTTTATCTCCATGATCCAACAACCCTTCTTGCTGCTGTTAATCCCTCACTGATCACTTAC
ACAGAAGGTGTTGTTAGAGTACAAACAAGTGGCATCACTAGGGGCCTCACACTATTTTAT
AACAAACAAAAGAGGTTTGCTGAAGTCACCGAATGGACTGACAAACCCACAGTCAAGGTG
GCAGTCACAGTTGATGCTCCTGCAGTTGTCAAGTTGGTCATGGATCGGCTTATTGATTCA
TAG

Peptide Sequence

PEP ID

VIT_05s0094g01420.t01
PEP Infomation

pep chromosome:12X:5:24721436:24725718:-1 gene:VIT_05s0094g01420 transcript:VIT_05s0094g01420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEPKKIIIDSDPGIDDAMAIFVALQSPEVDVIGLTTIYGNVYTTLATRNALHLLEIAGR
TDIPVAEGSHVTITKGTKLRIADFVHGADGLGNQNFPPSAGKPIEQSAAAFLIEQAKLYP
GKVTVVALGPLTNIALAIELDPGFSKNIGQIVLLGGAFAVNGNVNPAAEANIFGDPEAAD
IVFTSGADILAVGINVTHQVVLTDADREKLAQSNGKFAQYLCKILEVYFSYHRDAYNTKG
VYLHDPTTLLAAVNPSLITYTEGVVRVQTSGITRGLTLFYNKQKRFAEVTEWTDKPTVKV
AVTVDAPAVVKLVMDRLIDS

Transcript Sequence

Transcript ID

VIT_05s0094g01420.t01
Transcript Infomation

cdna chromosome:12X:5:24721436:24725718:-1 gene:VIT_05s0094g01420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGATCCTCTGCTGTTACGTTTTGGTACAATTCATCTCCTCGCCATGGCGGAACCCAAGAA
GATTATCATTGACTCAGACCCTGGGATCGATGATGCCATGGCCATATTTGTGGCTCTGCA
GTCACCCGAAGTGGACGTCATCGGACTCACTACCATCTACGGCAACGTCTACACCACTCT
GGCCACTAGAAATGCTTTACATTTGTTGGAGATCGCGGGGAGGACAGATATCCCAGTGGC
TGAAGGATCTCATGTGACAATAACTAAAGGTACAAAACTCCGTATTGCTGATTTTGTCCA
TGGTGCGGATGGACTTGGAAACCAAAACTTCCCTCCATCAGCAGGAAAGCCAATTGAACA
GTCAGCAGCTGCTTTTCTTATTGAGCAAGCTAAACTTTATCCTGGAAAAGTCACAGTGGT
GGCACTGGGTCCACTTACAAATATTGCACTGGCTATTGAACTAGATCCTGGGTTTTCCAA
AAACATTGGGCAGATTGTTCTTCTTGGTGGTGCTTTTGCTGTAAATGGGAATGTGAATCC
AGCAGCTGAGGCCAATATATTTGGCGATCCAGAAGCTGCAGATATTGTATTCACAAGTGG
AGCAGACATTCTGGCTGTGGGGATAAATGTTACCCATCAAGTTGTATTGACAGATGCCGA
TCGTGAAAAGCTGGCACAGTCCAATGGGAAATTTGCCCAGTACCTGTGCAAGATCTTAGA
GGTCTATTTCTCTTATCATCGCGATGCATACAACACCAAAGGTGTTTATCTCCATGATCC
AACAACCCTTCTTGCTGCTGTTAATCCCTCACTGATCACTTACACAGAAGGTGTTGTTAG
AGTACAAACAAGTGGCATCACTAGGGGCCTCACACTATTTTATAACAAACAAAAGAGGTT
TGCTGAAGTCACCGAATGGACTGACAAACCCACAGTCAAGGTGGCAGTCACAGTTGATGC
TCCTGCAGTTGTCAAGTTGGTCATGGATCGGCTTATTGATTCATAGAGAGTATGAAGATA
GGAACTTACTGATATTTCAGGAGGCTTCTGCTTCTTCCATTGTTGTCATCGGTTCTCAGC
ATTGCCCTTCAAGTCAATGGTCTCGACTCTTGGTTGCCGCACATTGCGAAACTACTCATG
TTGAATACAAACCAAAGTTTCTGATTTGGTTACTGCACCAGTCTAGTGCATCTCTGCATC
TCTAAATAGTCATAAAATTGTGAAAGTACACTTCTACTTGTTTCAGAAAGTGCAACATTG
CTAATGTTGGTTTTAGCATATGAATTGAACCAGTAGTCGTCAATGTTGGTTCTATTGTTA
AAACCACTATTAACACGGTTGGTTCTAGAGGAAATTTGAAAGAGGTTTAAAACCATTGTT
GACAATGCTATTCTAATGCATATGTACCAG