Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_05s0094g01080.t01
CDS Infomation

cds chromosome:12X:5:24408625:24418281:-1 gene:VIT_05s0094g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGATTGCGGCTCAGCTGAAGCGAGGCATCTCGCGCCAGTTCTCCACTGGATCGCTG
CTGAGGACCCTGAGCCGGCAGTTCTCGCGGCAGTCGTCGCTGGATCCGCGGAGGACCAAT
CTGAGGTTCAGCCTCGGGAGGCAATCGTCGCTGGATCCGATTCGGCGGAGCCCGGTGAAT
GAGGAGCTATCGGTGCCGGAGAATCTGGATTCCACCATGCAGATGCTGTTTATGGCGTGT
AGAGGGGATGTGAAGGGAGTGGAGGATTTGTTGAACGAAGGCACTGATGTGAACAGCATC
GATTTGGATGGCCGCACTGCTCTGCATATCGCGGCCTGTGAAGGTCAGATTGAGGTAGTT
AAGCTCCTGCTCAGTCGGAAGGCCAACATCGATGCTCGTGACCGTTGGGGGAGTACGGCA
GCTGCTGATGCTAAATACTATGGAAATGTAGAAATTTATAATATTTTGAAGGCTCGGGGA
GCCAAAACTCCGAAAATCAGGAAGACGCCAATGGCTGTTGCAAATCCTCGAGAAGTTCCA
GAGTATGAGCTTAATCCATTAGAGCTTCAGGTCCGCAAAAGTGATGGTATCACAAAGGGA
TCATACCAAGTAGCTAAATGGAATGGTACAAAGGTTTCTGTAAAGATACTTGATAAGGAC
AGCTATTCAGACCCCGATAGCATAAATGCTTTCAAATATGAGCTAACCTTATTAGAAAAG
GTCCGGCATCCAAATGTGGTTCAGTTTGTTGGAGCTGTTACCCAAAATATACCCATGATG
ATTGTTTCAGAGTATCATCCGAAAGGTGACCTGGGAAGCTATCTTCAAAAGAAAGGGCGT
CTATCTCTATCTAAAGCTCTAAGATATGCTCTTGATATTGCCAGGGGCATGAATTATCTA
CATGAATGCAAACCAGACCCAGTTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTG
GATAGTGGAGGTCAGTTGAAGGTTGCCGGATTTGGTTTATTAAGGCTGTCAAAGATGTCA
CCTGACAAAGTAAAATTAGCGCAATCAGGGAGTCACATTGATGCTTCAAATGTATATATG
GCACCTGAGGTTTATAGAGATGAACTATTTGACAGAAGTGTGGATTCATTCTCTTTCGGT
CTCATACTTTATGAGATGATTGAAGGAGTACAGCCCTTTCACCCAAAACCTCCAGAAGAA
GCCATCAAAATGATCTGTTTAGAAGGAAAGAGACCACCTTTCAAGAGCAAATCAAGAAGT
TATCCTCCAGATTTAAAAGAGTTGATCGAGGAATGTTGGAATCCGGAACCTGTTGTTCGG
CCAATCTTTTCTGAGGTCATAGTACGGTTGGATAAAATTGTTGGACATTGCTCTAGACAA
GCATGGTGGAAAGACACTTTCAAGCTTCCTTGGAAATAA

Peptide Sequence

PEP ID

VIT_05s0094g01080.t01
PEP Infomation

pep chromosome:12X:5:24408625:24418281:-1 gene:VIT_05s0094g01080 transcript:VIT_05s0094g01080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEIAAQLKRGISRQFSTGSLLRTLSRQFSRQSSLDPRRTNLRFSLGRQSSLDPIRRSPVN
EELSVPENLDSTMQMLFMACRGDVKGVEDLLNEGTDVNSIDLDGRTALHIAACEGQIEVV
KLLLSRKANIDARDRWGSTAAADAKYYGNVEIYNILKARGAKTPKIRKTPMAVANPREVP
EYELNPLELQVRKSDGITKGSYQVAKWNGTKVSVKILDKDSYSDPDSINAFKYELTLLEK
VRHPNVVQFVGAVTQNIPMMIVSEYHPKGDLGSYLQKKGRLSLSKALRYALDIARGMNYL
HECKPDPVIHCDLKPKNILLDSGGQLKVAGFGLLRLSKMSPDKVKLAQSGSHIDASNVYM
APEVYRDELFDRSVDSFSFGLILYEMIEGVQPFHPKPPEEAIKMICLEGKRPPFKSKSRS
YPPDLKELIEECWNPEPVVRPIFSEVIVRLDKIVGHCSRQAWWKDTFKLPWK

Transcript Sequence

Transcript ID

VIT_05s0094g01080.t01
Transcript Infomation

cdna chromosome:12X:5:24408625:24418281:-1 gene:VIT_05s0094g01080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTTTCTCTCCGCAACGACCATCTTCATCTTCTTCAATCTCATCAATGTTGATCTAACTC
TCAAACCACAGCTCCGCATCGAGAGCCTCGCATCATCGAAGCTCTCGATCGAGCTCATCA
TCGTCTTCTCCATCTCTCAATCCACTCTGCTGTGTCTGTGTGTTTTTTTGGTATGAACTG
ATTAAGTGTTGGCAAGCCGTTGAATTGTGGATATGGAGATTGCGGCTCAGCTGAAGCGAG
GCATCTCGCGCCAGTTCTCCACTGGATCGCTGCTGAGGACCCTGAGCCGGCAGTTCTCGC
GGCAGTCGTCGCTGGATCCGCGGAGGACCAATCTGAGGTTCAGCCTCGGGAGGCAATCGT
CGCTGGATCCGATTCGGCGGAGCCCGGTGAATGAGGAGCTATCGGTGCCGGAGAATCTGG
ATTCCACCATGCAGATGCTGTTTATGGCGTGTAGAGGGGATGTGAAGGGAGTGGAGGATT
TGTTGAACGAAGGCACTGATGTGAACAGCATCGATTTGGATGGCCGCACTGCTCTGCATA
TCGCGGCCTGTGAAGGTCAGATTGAGGTAGTTAAGCTCCTGCTCAGTCGGAAGGCCAACA
TCGATGCTCGTGACCGTTGGGGGAGTACGGCAGCTGCTGATGCTAAATACTATGGAAATG
TAGAAATTTATAATATTTTGAAGGCTCGGGGAGCCAAAACTCCGAAAATCAGGAAGACGC
CAATGGCTGTTGCAAATCCTCGAGAAGTTCCAGAGTATGAGCTTAATCCATTAGAGCTTC
AGGTCCGCAAAAGTGATGGTATCACAAAGGGATCATACCAAGTAGCTAAATGGAATGGTA
CAAAGGTTTCTGTAAAGATACTTGATAAGGACAGCTATTCAGACCCCGATAGCATAAATG
CTTTCAAATATGAGCTAACCTTATTAGAAAAGGTCCGGCATCCAAATGTGGTTCAGTTTG
TTGGAGCTGTTACCCAAAATATACCCATGATGATTGTTTCAGAGTATCATCCGAAAGGTG
ACCTGGGAAGCTATCTTCAAAAGAAAGGGCGTCTATCTCTATCTAAAGCTCTAAGATATG
CTCTTGATATTGCCAGGGGCATGAATTATCTACATGAATGCAAACCAGACCCAGTTATCC
ACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAGTGGAGGTCAGTTGAAGGTTGCCG
GATTTGGTTTATTAAGGCTGTCAAAGATGTCACCTGACAAAGTAAAATTAGCGCAATCAG
GGAGTCACATTGATGCTTCAAATGTATATATGGCACCTGAGGTTTATAGAGATGAACTAT
TTGACAGAAGTGTGGATTCATTCTCTTTCGGTCTCATACTTTATGAGATGATTGAAGGAG
TACAGCCCTTTCACCCAAAACCTCCAGAAGAAGCCATCAAAATGATCTGTTTAGAAGGAA
AGAGACCACCTTTCAAGAGCAAATCAAGAAGTTATCCTCCAGATTTAAAAGAGTTGATCG
AGGAATGTTGGAATCCGGAACCTGTTGTTCGGCCAATCTTTTCTGAGGTCATAGTACGGT
TGGATAAAATTGTTGGACATTGCTCTAGACAAGCATGGTGGAAAGACACTTTCAAGCTTC
CTTGGAAATAAGAGGGCACGTTCAGTTCCACAGAGAATGAAAAAAAAAGACGAGAAAGAG
AAAGAGAAAGAGGGGATCTCCATAGACCTCTTAAGAGTTTTGGGAGCTTTTTATGTTGCA
CTGTTATTATGAACTAAATAAGAAAGGATCTCGGGGTAAATTCTAAGTCAAGCCTAAAGT
AGAAACAACCGTTTGCCTTTCTTCTGTCTCCTCAAGGAGTTGGTGAAAAATCCTTTTTTG
TATAAATAGACAAAACGAATAAGTTTATCTGTAATTGCAATTTGCAACATCTTCCTCTTC
CTCTCCACGACTCAGCACCTTCTAGAGACCAGTCATATTGTGACCAGCTCTCAGAGAGCT
CTGCTTCTCTTCTTATTTCTGAATCTCCACATGAAAATTGTGTTTGTTTGAAAATTTTGT
TCTGAAAATATGTTTTTTTGGAACAAAGTTGAAGTGTTTTTACTTTTTACTTACTTTTAT
AATGATTTTAATTAATAATAAAAATTTGAGAACTATTACCAAATT